BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst333z56 (667 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT830585.1| Oryza sativa (indica cultivar-group) cDNA clone:... 268 3e-68 ref|NM_001048803.1| Oryza sativa (japonica cultivar-group) Os01g... 268 3e-68 dbj|AK058815.1| Oryza sativa (japonica cultivar-group) cDNA clon... 268 3e-68 gb|DQ244151.1| Zea mays clone 2586 mRNA sequence 228 2e-56 emb|X86553.1|ZMRNARPP2 Z.mays mRNA for 60S acidic ribosomal protein 228 2e-56 >emb|CT830585.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN022M13, full insert sequence Length = 671 Score = 268 bits (135), Expect = 3e-68 Identities = 364/439 (82%), Gaps = 1/439 (0%) Strand = Plus / Plus Query: 49 ccgcctccgctcctccagctctctccctctcccatccaagaggaagtttgttgctgccta 108 ||||| |||||| || ||||||||| ||||||||||| || |||||| || ||||||| Sbjct: 48 ccgccgccgctcgtcgggctctctccatctcccatccaggatgaagttcatttctgccta 107 Query: 109 tatgcttgctgtcctggatggcaaccccagcccctctgcagacgatttgacgtctattct 168 | || | || |||| ||||||| |||||||| |||| || |||||||| | ||||| Sbjct: 108 tctgatggcctatctggctggcaactccagccccactgcggaggatttgacaacgattct 167 Query: 169 ggagtcagttggtgttgagattgacagtgtaagggttgaactgctgttgtcccaactgag 228 ||||||||||||| ||| || |||| || || | | ||||| |||||||| ||| |||| Sbjct: 168 ggagtcagttggttgtgaaatcgacaatgcaaagatggaactcctgttgtctcaagtgag 227 Query: 229 tggtaaggacattaatgaggtcattgctgccggtagggagaagtttgcttcagttccatg 288 ||| |||||||| | |||| |||| ||| || ||||||||||||||||||||||||| Sbjct: 228 tggcaaggacatcactgagctcatcgcttgtggcagggagaagtttgcttcagttccatc 287 Query: 289 tggtggtggcggtgtagctgttgcagcagctgctcctaccaacggtggtgctggcgctgc 348 ||||||||| |||||||||||||| || ||||||||| | |||||||||||| | ||| Sbjct: 288 tggtggtggtggtgtagctgttgctgctgctgctcctgctgccggtggtgctggtggtgc 347 Query: 349 tcctgcagctgaatcgaagaaagaagagaaggttgaggagaaggaagagagtgatgatga 408 |||||||||||| ||||||||||||| ||||| || ||||||||||| ||||||||||| Sbjct: 348 tcctgcagctgaggcgaagaaagaagataaggtcgaagagaaggaagaaagtgatgatga 407 Query: 409 catgggcttcagtctgttcgactaagtggtgggggtcttctcttgtatcatcagtatcag 468 ||||||||||||| |||| |||| |||| | | |||| ||||| |||||||| || ||| Sbjct: 408 catgggcttcagtttgtttgactgagtgat-gcggtcacctcttctatcatcaataccag 466 Query: 469 tctttgggcaggaaactag 487 ||||| |||||||||||| Sbjct: 467 actttgcgcaggaaactag 485 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 540 ggaaagactttgctacctactatgttttgatatgtagtaatccagccgtagggtgctggt 599 ||||||||| |||| ||||||||||||||||||||||||| ||||| |||| ||||||| Sbjct: 542 ggaaagactatgcttcctactatgttttgatatgtagtaacgcagccataggttgctggt 601 Query: 600 tgatttaccggtgaaccatacctttgctatc 630 | || || |||||||||| | ||||||||| Sbjct: 602 tacttcactggtgaaccatgcttttgctatc 632 >ref|NM_001048803.1| Oryza sativa (japonica cultivar-group) Os01g0191100 (Os01g0191100) mRNA, complete cds Length = 693 Score = 268 bits (135), Expect = 3e-68 Identities = 364/439 (82%), Gaps = 1/439 (0%) Strand = Plus / Plus Query: 49 ccgcctccgctcctccagctctctccctctcccatccaagaggaagtttgttgctgccta 108 ||||| |||||| || ||||||||| ||||||||||| || |||||| || ||||||| Sbjct: 51 ccgccgccgctcgtcgggctctctccatctcccatccaggatgaagttcatttctgccta 110 Query: 109 tatgcttgctgtcctggatggcaaccccagcccctctgcagacgatttgacgtctattct 168 | || | || |||| ||||||| |||||||| |||| || |||||||| | ||||| Sbjct: 111 tctgatggcctatctggctggcaactccagccccactgcggaggatttgacaacgattct 170 Query: 169 ggagtcagttggtgttgagattgacagtgtaagggttgaactgctgttgtcccaactgag 228 ||||||||||||| ||| || |||| || || | | ||||| |||||||| ||| |||| Sbjct: 171 ggagtcagttggttgtgaaatcgacaatgcaaagatggaactcctgttgtctcaagtgag 230 Query: 229 tggtaaggacattaatgaggtcattgctgccggtagggagaagtttgcttcagttccatg 288 ||| |||||||| | |||| |||| ||| || ||||||||||||||||||||||||| Sbjct: 231 tggcaaggacatcactgagctcatcgcttgtggcagggagaagtttgcttcagttccatc 290 Query: 289 tggtggtggcggtgtagctgttgcagcagctgctcctaccaacggtggtgctggcgctgc 348 ||||||||| |||||||||||||| || ||||||||| | |||||||||||| | ||| Sbjct: 291 tggtggtggtggtgtagctgttgctgctgctgctcctgctgccggtggtgctggtggtgc 350 Query: 349 tcctgcagctgaatcgaagaaagaagagaaggttgaggagaaggaagagagtgatgatga 408 |||||||||||| ||||||||||||| ||||| || ||||||||||| ||||||||||| Sbjct: 351 tcctgcagctgaggcgaagaaagaagataaggtcgaagagaaggaagaaagtgatgatga 410 Query: 409 catgggcttcagtctgttcgactaagtggtgggggtcttctcttgtatcatcagtatcag 468 ||||||||||||| |||| |||| |||| | | |||| ||||| |||||||| || ||| Sbjct: 411 catgggcttcagtttgtttgactgagtgat-gcggtcacctcttctatcatcaataccag 469 Query: 469 tctttgggcaggaaactag 487 ||||| |||||||||||| Sbjct: 470 actttgcgcaggaaactag 488 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 540 ggaaagactttgctacctactatgttttgatatgtagtaatccagccgtagggtgctggt 599 ||||||||| |||| ||||||||||||||||||||||||| ||||| |||| ||||||| Sbjct: 545 ggaaagactatgcttcctactatgttttgatatgtagtaacgcagccataggttgctggt 604 Query: 600 tgatttaccggtgaaccatacctttgctatc 630 | || || |||||||||| | ||||||||| Sbjct: 605 tacttcactggtgaaccatgcttttgctatc 635 >dbj|AK058815.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-F04, full insert sequence Length = 693 Score = 268 bits (135), Expect = 3e-68 Identities = 364/439 (82%), Gaps = 1/439 (0%) Strand = Plus / Plus Query: 49 ccgcctccgctcctccagctctctccctctcccatccaagaggaagtttgttgctgccta 108 ||||| |||||| || ||||||||| ||||||||||| || |||||| || ||||||| Sbjct: 51 ccgccgccgctcgtcgggctctctccatctcccatccaggatgaagttcatttctgccta 110 Query: 109 tatgcttgctgtcctggatggcaaccccagcccctctgcagacgatttgacgtctattct 168 | || | || |||| ||||||| |||||||| |||| || |||||||| | ||||| Sbjct: 111 tctgatggcctatctggctggcaactccagccccactgcggaggatttgacaacgattct 170 Query: 169 ggagtcagttggtgttgagattgacagtgtaagggttgaactgctgttgtcccaactgag 228 ||||||||||||| ||| || |||| || || | | ||||| |||||||| ||| |||| Sbjct: 171 ggagtcagttggttgtgaaatcgacaatgcaaagatggaactcctgttgtctcaagtgag 230 Query: 229 tggtaaggacattaatgaggtcattgctgccggtagggagaagtttgcttcagttccatg 288 ||| |||||||| | |||| |||| ||| || ||||||||||||||||||||||||| Sbjct: 231 tggcaaggacatcactgagctcatcgcttgtggcagggagaagtttgcttcagttccatc 290 Query: 289 tggtggtggcggtgtagctgttgcagcagctgctcctaccaacggtggtgctggcgctgc 348 ||||||||| |||||||||||||| || ||||||||| | |||||||||||| | ||| Sbjct: 291 tggtggtggtggtgtagctgttgctgctgctgctcctgctgccggtggtgctggtggtgc 350 Query: 349 tcctgcagctgaatcgaagaaagaagagaaggttgaggagaaggaagagagtgatgatga 408 |||||||||||| ||||||||||||| ||||| || ||||||||||| ||||||||||| Sbjct: 351 tcctgcagctgaggcgaagaaagaagataaggtcgaagagaaggaagaaagtgatgatga 410 Query: 409 catgggcttcagtctgttcgactaagtggtgggggtcttctcttgtatcatcagtatcag 468 ||||||||||||| |||| |||| |||| | | |||| ||||| |||||||| || ||| Sbjct: 411 catgggcttcagtttgtttgactgagtgat-gcggtcacctcttctatcatcaataccag 469 Query: 469 tctttgggcaggaaactag 487 ||||| |||||||||||| Sbjct: 470 actttgcgcaggaaactag 488 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 540 ggaaagactttgctacctactatgttttgatatgtagtaatccagccgtagggtgctggt 599 ||||||||| |||| ||||||||||||||||||||||||| ||||| |||| ||||||| Sbjct: 545 ggaaagactatgcttcctactatgttttgatatgtagtaacgcagccataggttgctggt 604 Query: 600 tgatttaccggtgaaccatacctttgctatc 630 | || || |||||||||| | ||||||||| Sbjct: 605 tacttcactggtgaaccatgcttttgctatc 635 >gb|DQ244151.1| Zea mays clone 2586 mRNA sequence Length = 797 Score = 228 bits (115), Expect = 2e-56 Identities = 285/342 (83%), Gaps = 6/342 (1%) Strand = Plus / Plus Query: 91 gaagtttgttgctgcctatatgcttgctgtcctggatggcaaccccagcccctctgcaga 150 |||||||||||||||||| ||||||||||||| | ||| ||| |||||||||| || || Sbjct: 177 gaagtttgttgctgcctacctgcttgctgtcctcgctgggaacgccagcccctccgctga 236 Query: 151 cgatttgacgtctattctggagtcagttggtgttgagattgacagtgtaagggttgaact 210 ||||||||| | ||||||||||||||||| ||| |||||| || || | | ||||| Sbjct: 237 cgatttgactgccattctggagtcagttggctgtgaagttgacaatgaaaagatggaact 296 Query: 211 gctgttgtcccaactgagtggtaaggacattaatgaggtcattgctgccggtagggagaa 270 ||| ||||||||||||| ||||||||||| | ||| ||||||| || || |||||||| Sbjct: 297 cctgctgtcccaactgagcggtaaggacatcaccgagctcattgccgcgggcagggagaa 356 Query: 271 gtttgcttcagttccatgtggtggtggcggtgtagctgttgcagcagctgctcctaccaa 330 |||||||||||| ||||||||||| |||||||| |||||||| |||||||| ||| Sbjct: 357 gtttgcttcagtcccatgtggtggcggcggtgtcgctgttgcggcagctgcacct----- 411 Query: 331 cggtggtgctggcgctgctcctgcagctgaatcgaagaaagaagagaaggttgaggagaa 390 | || || || ||||||||||||||||| | ||||||||||||||||| || ||||| Sbjct: 412 -gctgctggcggagctgctcctgcagctgaggcaaagaaagaagagaaggtggaagagaa 470 Query: 391 ggaagagagtgatgatgacatgggcttcagtctgttcgacta 432 |||||| || |||||||| ||||||||||| || |||||||| Sbjct: 471 ggaagaaagcgatgatgatatgggcttcagcctcttcgacta 512 >emb|X86553.1|ZMRNARPP2 Z.mays mRNA for 60S acidic ribosomal protein Length = 544 Score = 228 bits (115), Expect = 2e-56 Identities = 285/342 (83%), Gaps = 6/342 (1%) Strand = Plus / Plus Query: 91 gaagtttgttgctgcctatatgcttgctgtcctggatggcaaccccagcccctctgcaga 150 |||||||||||||||||| ||||||||||||| | ||| ||| |||||||||| || || Sbjct: 45 gaagtttgttgctgcctacctgcttgctgtcctcgctgggaacgccagcccctccgctga 104 Query: 151 cgatttgacgtctattctggagtcagttggtgttgagattgacagtgtaagggttgaact 210 ||||||||| | ||||||||||||||||| ||| |||||| || || | | ||||| Sbjct: 105 cgatttgactgccattctggagtcagttggctgtgaagttgacaatgaaaagatggaact 164 Query: 211 gctgttgtcccaactgagtggtaaggacattaatgaggtcattgctgccggtagggagaa 270 ||| ||||||||||||| ||||||||||| | ||| ||||||| || || |||||||| Sbjct: 165 cctgctgtcccaactgagcggtaaggacatcaccgagctcattgccgcgggcagggagaa 224 Query: 271 gtttgcttcagttccatgtggtggtggcggtgtagctgttgcagcagctgctcctaccaa 330 |||||||||||| ||||||||||| |||||||| |||||||| |||||||| ||| Sbjct: 225 gtttgcttcagtcccatgtggtggcggcggtgtcgctgttgcggcagctgcacct----- 279 Query: 331 cggtggtgctggcgctgctcctgcagctgaatcgaagaaagaagagaaggttgaggagaa 390 | || || || ||||||||||||||||| | ||||||||||||||||| || ||||| Sbjct: 280 -gctgctggcggagctgctcctgcagctgaggcaaagaaagaagagaaggtggaagagaa 338 Query: 391 ggaagagagtgatgatgacatgggcttcagtctgttcgacta 432 |||||| || |||||||| ||||||||||| || |||||||| Sbjct: 339 ggaagaaagcgatgatgatatgggcttcagcctcttcgacta 380