BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst333z09 (947 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT830479.1| Oryza sativa (indica cultivar-group) cDNA clone:... 266 1e-67 ref|NM_001056073.1| Oryza sativa (japonica cultivar-group) Os03g... 266 1e-67 dbj|AK059409.1| Oryza sativa (japonica cultivar-group) cDNA clon... 266 1e-67 gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare str... 188 3e-44 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 188 3e-44 >emb|CT830479.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA029D09, full insert sequence Length = 1019 Score = 266 bits (134), Expect = 1e-67 Identities = 248/286 (86%) Strand = Plus / Plus Query: 149 cggcgccggtcgtggttgggtcggtcaagtgcttggattgctcccccaacgacgtcaaag 208 |||||||| |||||||||| || ||||||||||||||||||| ||| |||||||||||| Sbjct: 161 cggcgccgctcgtggttggctccatcaagtgcttggattgctctcccgacgacgtcaaag 220 Query: 209 ctgaagatgcattcaaagggcttcaggtagccatcaagtgcaagaccggcgccggtgaga 268 |||| ||||| |||| ||||||||| |||| ||||| |||||| |||||||||| ||| Sbjct: 221 ctgaggatgcgttcagagggcttcaagtaggcatcatgtgcaactccggcgccggcgagg 280 Query: 269 cctacgagacgaagacgctcggccacctcgacgacaccggctccttcatcatccccctcg 328 ||||||||||||||| |||| || ||||||||| | |||| ||||| |||||| |||| Sbjct: 281 cctacgagacgaagatgctcagcggcctcgacgagaacggcggcttcagcatcccgctcg 340 Query: 329 cggccgacctcctccgcgacaacggcgagctggaccgcgactgcttcgcgcagctccaca 388 |||||||||||||||||| | |||||||||||||| ||||||||||| |||||||||| Sbjct: 341 cggccgacctcctccgcgtcgacggcgagctggacaaggactgcttcgcacagctccaca 400 Query: 389 gcgcgcccgacacgccgtgcgtcgggcaggcgccgcccaggatcgc 434 ||||||| || |||||||||| ||| ||| | |||||||||||||| Sbjct: 401 gcgcgccggagacgccgtgcgccggacagaccccgcccaggatcgc 446 Score = 196 bits (99), Expect = 1e-46 Identities = 255/307 (83%), Gaps = 15/307 (4%) Strand = Plus / Plus Query: 466 acctacctcgcggtcgcggacgacacggaattctcgcccgtggcgtgcaagtgcggcaag 525 ||||||||||||||| | ||||||||| |||||| ||||| |||||||||||||||||| Sbjct: 502 acctacctcgcggtctccgacgacacgttattctctcccgtcgcgtgcaagtgcggcaag 561 Query: 526 ttcaagaagaagcatttcatgttcagcaggccgc------cgccgcccaggccgcccgcg 579 | |||||||||| ||||||||| | ||||| |||||||||||||||| || Sbjct: 562 tacaagaagaag---ttcatgttcgccccgccgccgccgccgccgcccaggccgccggcc 618 Query: 580 ccggagtacaagcccccgacgccgacgccgacgcccgt------gccggagccctcgtac 633 |||||||||||||||||||| ||||| | ||| || | ||||||||| |||||| Sbjct: 619 ccggagtacaagcccccgacaccgacactgactccgattccgacgccggagccatcgtac 678 Query: 634 ggaccgccgacgcccaagccgcccgcgccgccggcggaggatgagccggagccgatcttc 693 || || ||| |||| ||||| || || ||||||| |||||| |||||| ||||| ||||| Sbjct: 679 gggccaccggcgccgaagccaccagctccgccggtggaggacgagccgcagccgttcttc 738 Query: 694 cacaagcaccccaagatgaagctcatgcacaagaagaagccgtgcccgccgctggtcgac 753 ||||||||||| ||| | ||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 739 cacaagcacccgaagctcaagttcatgcacaagaagaagccgtgcccgccgctcgtcgac 798 Query: 754 gaggaca 760 | ||||| Sbjct: 799 gtggaca 805 >ref|NM_001056073.1| Oryza sativa (japonica cultivar-group) Os03g0245300 (Os03g0245300) mRNA, complete cds Length = 1025 Score = 266 bits (134), Expect = 1e-67 Identities = 248/286 (86%) Strand = Plus / Plus Query: 149 cggcgccggtcgtggttgggtcggtcaagtgcttggattgctcccccaacgacgtcaaag 208 |||||||| |||||||||| || ||||||||||||||||||| ||| |||||||||||| Sbjct: 163 cggcgccgctcgtggttggctccatcaagtgcttggattgctctcccgacgacgtcaaag 222 Query: 209 ctgaagatgcattcaaagggcttcaggtagccatcaagtgcaagaccggcgccggtgaga 268 |||| ||||| |||| ||||||||| |||| ||||| |||||| |||||||||| ||| Sbjct: 223 ctgaggatgcgttcagagggcttcaagtaggcatcatgtgcaactccggcgccggcgagg 282 Query: 269 cctacgagacgaagacgctcggccacctcgacgacaccggctccttcatcatccccctcg 328 ||||||||||||||| |||| || ||||||||| | |||| ||||| |||||| |||| Sbjct: 283 cctacgagacgaagatgctcagcggcctcgacgagaacggcggcttcagcatcccgctcg 342 Query: 329 cggccgacctcctccgcgacaacggcgagctggaccgcgactgcttcgcgcagctccaca 388 | |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 343 ccgccgacctcctccgcgacgacggcgagctggacaaggactgcttcgcacagctccaca 402 Query: 389 gcgcgcccgacacgccgtgcgtcgggcaggcgccgcccaggatcgc 434 ||||||| || |||||||||| ||| ||| | |||||||||||||| Sbjct: 403 gcgcgccggagacgccgtgcgccggacagaccccgcccaggatcgc 448 Score = 188 bits (95), Expect = 3e-44 Identities = 254/307 (82%), Gaps = 15/307 (4%) Strand = Plus / Plus Query: 466 acctacctcgcggtcgcggacgacacggaattctcgcccgtggcgtgcaagtgcggcaag 525 ||||||||||||||| | ||||||||| |||||| ||||| |||||||||||||||||| Sbjct: 504 acctacctcgcggtctccgacgacacgttattctctcccgtcgcgtgcaagtgcggcaag 563 Query: 526 ttcaagaagaagcatttcatgttcagcaggccgc------cgccgcccaggccgcccgcg 579 | |||||||||| ||||||||| | ||||| ||||||||||||| || || Sbjct: 564 tacaagaagaag---ttcatgttcgccccgccgccgccgccgccgcccaggccaccggcc 620 Query: 580 ccggagtacaagcccccgacgccgacgccgacgcccgt------gccggagccctcgtac 633 |||||||||||||||||||| ||||| | ||| || | ||||||||| |||||| Sbjct: 621 ccggagtacaagcccccgacaccgacactgactccgattccgacgccggagccatcgtac 680 Query: 634 ggaccgccgacgcccaagccgcccgcgccgccggcggaggatgagccggagccgatcttc 693 || || ||| |||| ||||| || || ||||||| |||||| |||||| ||||| ||||| Sbjct: 681 gggccaccggcgccgaagccaccagctccgccggtggaggacgagccgcagccgttcttc 740 Query: 694 cacaagcaccccaagatgaagctcatgcacaagaagaagccgtgcccgccgctggtcgac 753 ||||||||||| ||| | ||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 741 cacaagcacccgaagctcaagttcatgcacaagaagaagccgtgcccgccgctcgtcgac 800 Query: 754 gaggaca 760 | ||||| Sbjct: 801 gtggaca 807 >dbj|AK059409.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-C05, full insert sequence Length = 1026 Score = 266 bits (134), Expect = 1e-67 Identities = 248/286 (86%) Strand = Plus / Plus Query: 149 cggcgccggtcgtggttgggtcggtcaagtgcttggattgctcccccaacgacgtcaaag 208 |||||||| |||||||||| || ||||||||||||||||||| ||| |||||||||||| Sbjct: 164 cggcgccgctcgtggttggctccatcaagtgcttggattgctctcccgacgacgtcaaag 223 Query: 209 ctgaagatgcattcaaagggcttcaggtagccatcaagtgcaagaccggcgccggtgaga 268 |||| ||||| |||| ||||||||| |||| ||||| |||||| |||||||||| ||| Sbjct: 224 ctgaggatgcgttcagagggcttcaagtaggcatcatgtgcaactccggcgccggcgagg 283 Query: 269 cctacgagacgaagacgctcggccacctcgacgacaccggctccttcatcatccccctcg 328 ||||||||||||||| |||| || ||||||||| | |||| ||||| |||||| |||| Sbjct: 284 cctacgagacgaagatgctcagcggcctcgacgagaacggcggcttcagcatcccgctcg 343 Query: 329 cggccgacctcctccgcgacaacggcgagctggaccgcgactgcttcgcgcagctccaca 388 | |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 344 ccgccgacctcctccgcgacgacggcgagctggacaaggactgcttcgcacagctccaca 403 Query: 389 gcgcgcccgacacgccgtgcgtcgggcaggcgccgcccaggatcgc 434 ||||||| || |||||||||| ||| ||| | |||||||||||||| Sbjct: 404 gcgcgccggagacgccgtgcgccggacagaccccgcccaggatcgc 449 Score = 188 bits (95), Expect = 3e-44 Identities = 254/307 (82%), Gaps = 15/307 (4%) Strand = Plus / Plus Query: 466 acctacctcgcggtcgcggacgacacggaattctcgcccgtggcgtgcaagtgcggcaag 525 ||||||||||||||| | ||||||||| |||||| ||||| |||||||||||||||||| Sbjct: 505 acctacctcgcggtctccgacgacacgttattctctcccgtcgcgtgcaagtgcggcaag 564 Query: 526 ttcaagaagaagcatttcatgttcagcaggccgc------cgccgcccaggccgcccgcg 579 | |||||||||| ||||||||| | ||||| ||||||||||||| || || Sbjct: 565 tacaagaagaag---ttcatgttcgccccgccgccgccgccgccgcccaggccaccggcc 621 Query: 580 ccggagtacaagcccccgacgccgacgccgacgcccgt------gccggagccctcgtac 633 |||||||||||||||||||| ||||| | ||| || | ||||||||| |||||| Sbjct: 622 ccggagtacaagcccccgacaccgacactgactccgattccgacgccggagccatcgtac 681 Query: 634 ggaccgccgacgcccaagccgcccgcgccgccggcggaggatgagccggagccgatcttc 693 || || ||| |||| ||||| || || ||||||| |||||| |||||| ||||| ||||| Sbjct: 682 gggccaccggcgccgaagccaccagctccgccggtggaggacgagccgcagccgttcttc 741 Query: 694 cacaagcaccccaagatgaagctcatgcacaagaagaagccgtgcccgccgctggtcgac 753 ||||||||||| ||| | ||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 742 cacaagcacccgaagctcaagttcatgcacaagaagaagccgtgcccgccgctcgtcgac 801 Query: 754 gaggaca 760 | ||||| Sbjct: 802 gtggaca 808 >gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 188 bits (95), Expect = 3e-44 Identities = 254/307 (82%), Gaps = 15/307 (4%) Strand = Plus / Plus Query: 466 acctacctcgcggtcgcggacgacacggaattctcgcccgtggcgtgcaagtgcggcaag 525 ||||||||||||||| | ||||||||| |||||| ||||| |||||||||||||||||| Sbjct: 67479 acctacctcgcggtctccgacgacacgttattctctcccgtcgcgtgcaagtgcggcaag 67538 Query: 526 ttcaagaagaagcatttcatgttcagcaggccgc------cgccgcccaggccgcccgcg 579 | |||||||||| ||||||||| | ||||| ||||||||||||| || || Sbjct: 67539 tacaagaagaag---ttcatgttcgccccgccgccgccgccgccgcccaggccaccggcc 67595 Query: 580 ccggagtacaagcccccgacgccgacgccgacgcccgt------gccggagccctcgtac 633 |||||||||||||||||||| ||||| | ||| || | ||||||||| |||||| Sbjct: 67596 ccggagtacaagcccccgacaccgacactgactccgattccgacgccggagccatcgtac 67655 Query: 634 ggaccgccgacgcccaagccgcccgcgccgccggcggaggatgagccggagccgatcttc 693 || || ||| |||| ||||| || || ||||||| |||||| |||||| ||||| ||||| Sbjct: 67656 gggccaccggcgccgaagccaccagctccgccggtggaggacgagccgcagccgttcttc 67715 Query: 694 cacaagcaccccaagatgaagctcatgcacaagaagaagccgtgcccgccgctggtcgac 753 ||||||||||| ||| | ||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 67716 cacaagcacccgaagctcaagttcatgcacaagaagaagccgtgcccgccgctcgtcgac 67775 Query: 754 gaggaca 760 | ||||| Sbjct: 67776 gtggaca 67782 Score = 186 bits (94), Expect = 1e-43 Identities = 181/210 (86%) Strand = Plus / Plus Query: 225 agggcttcaggtagccatcaagtgcaagaccggcgccggtgagacctacgagacgaagac 284 ||||||||| |||| ||||| |||||| |||||||||| ||| ||||||||||||||| Sbjct: 67214 agggcttcaagtaggcatcatgtgcaactccggcgccggcgaggcctacgagacgaagat 67273 Query: 285 gctcggccacctcgacgacaccggctccttcatcatccccctcgcggccgacctcctccg 344 |||| || ||||||||| | |||| ||||| |||||| ||||| |||||||||||||| Sbjct: 67274 gctcagcggcctcgacgagaacggcggcttcagcatcccgctcgccgccgacctcctccg 67333 Query: 345 cgacaacggcgagctggaccgcgactgcttcgcgcagctccacagcgcgcccgacacgcc 404 |||| |||||||||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 67334 cgacgacggcgagctggacaaggactgcttcgcacagctccacagcgcgccggagacgcc 67393 Query: 405 gtgcgtcgggcaggcgccgcccaggatcgc 434 ||||| ||| ||| | |||||||||||||| Sbjct: 67394 gtgcgccggacagaccccgcccaggatcgc 67423 Score = 85.7 bits (43), Expect = 3e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 149 cggcgccggtcgtggttgggtcggtcaagtgcttggattgctcccccaacgacgtcaaag 208 |||||||| |||||||||| || ||||||||||||||||||| ||| |||||||||||| Sbjct: 66725 cggcgccgctcgtggttggctccatcaagtgcttggattgctctcccgacgacgtcaaag 66784 Query: 209 ctgaagatgcattca 223 |||| ||||| |||| Sbjct: 66785 ctgaggatgcgttca 66799 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 188 bits (95), Expect = 3e-44 Identities = 254/307 (82%), Gaps = 15/307 (4%) Strand = Plus / Minus Query: 466 acctacctcgcggtcgcggacgacacggaattctcgcccgtggcgtgcaagtgcggcaag 525 ||||||||||||||| | ||||||||| |||||| ||||| |||||||||||||||||| Sbjct: 7645646 acctacctcgcggtctccgacgacacgttattctctcccgtcgcgtgcaagtgcggcaag 7645587 Query: 526 ttcaagaagaagcatttcatgttcagcaggccgc------cgccgcccaggccgcccgcg 579 | |||||||||| ||||||||| | ||||| ||||||||||||| || || Sbjct: 7645586 tacaagaagaag---ttcatgttcgccccgccgccgccgccgccgcccaggccaccggcc 7645530 Query: 580 ccggagtacaagcccccgacgccgacgccgacgcccgt------gccggagccctcgtac 633 |||||||||||||||||||| ||||| | ||| || | ||||||||| |||||| Sbjct: 7645529 ccggagtacaagcccccgacaccgacactgactccgattccgacgccggagccatcgtac 7645470 Query: 634 ggaccgccgacgcccaagccgcccgcgccgccggcggaggatgagccggagccgatcttc 693 || || ||| |||| ||||| || || ||||||| |||||| |||||| ||||| ||||| Sbjct: 7645469 gggccaccggcgccgaagccaccagctccgccggtggaggacgagccgcagccgttcttc 7645410 Query: 694 cacaagcaccccaagatgaagctcatgcacaagaagaagccgtgcccgccgctggtcgac 753 ||||||||||| ||| | ||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 7645409 cacaagcacccgaagctcaagttcatgcacaagaagaagccgtgcccgccgctcgtcgac 7645350 Query: 754 gaggaca 760 | ||||| Sbjct: 7645349 gtggaca 7645343 Score = 186 bits (94), Expect = 1e-43 Identities = 181/210 (86%) Strand = Plus / Minus Query: 225 agggcttcaggtagccatcaagtgcaagaccggcgccggtgagacctacgagacgaagac 284 ||||||||| |||| ||||| |||||| |||||||||| ||| ||||||||||||||| Sbjct: 7645911 agggcttcaagtaggcatcatgtgcaactccggcgccggcgaggcctacgagacgaagat 7645852 Query: 285 gctcggccacctcgacgacaccggctccttcatcatccccctcgcggccgacctcctccg 344 |||| || ||||||||| | |||| ||||| |||||| ||||| |||||||||||||| Sbjct: 7645851 gctcagcggcctcgacgagaacggcggcttcagcatcccgctcgccgccgacctcctccg 7645792 Query: 345 cgacaacggcgagctggaccgcgactgcttcgcgcagctccacagcgcgcccgacacgcc 404 |||| |||||||||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 7645791 cgacgacggcgagctggacaaggactgcttcgcacagctccacagcgcgccggagacgcc 7645732 Query: 405 gtgcgtcgggcaggcgccgcccaggatcgc 434 ||||| ||| ||| | |||||||||||||| Sbjct: 7645731 gtgcgccggacagaccccgcccaggatcgc 7645702 Score = 85.7 bits (43), Expect = 3e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 149 cggcgccggtcgtggttgggtcggtcaagtgcttggattgctcccccaacgacgtcaaag 208 |||||||| |||||||||| || ||||||||||||||||||| ||| |||||||||||| Sbjct: 7646400 cggcgccgctcgtggttggctccatcaagtgcttggattgctctcccgacgacgtcaaag 7646341 Query: 209 ctgaagatgcattca 223 |||| ||||| |||| Sbjct: 7646340 ctgaggatgcgttca 7646326