BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst039m24 (1429 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK243058.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 260 1e-65 ref|NM_001056748.1| Oryza sativa (japonica cultivar-group) Os03g... 248 5e-62 gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genom... 242 3e-60 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 242 3e-60 emb|CT835132.1| Oryza sativa (indica cultivar-group) cDNA clone:... 204 7e-49 >dbj|AK243058.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100013P19, full insert sequence Length = 1250 Score = 260 bits (131), Expect = 1e-65 Identities = 209/235 (88%) Strand = Plus / Plus Query: 73 aaagatcactatgggaagaagctacgattacagtccatcaccgccaagaggttacagaag 132 ||||||||||||||||||| |||| ||||| |||||||||||||||||| ||||| || Sbjct: 119 aaagatcactatgggaagaggctatgattatggtccatcaccgccaagagaatacaggag 178 Query: 133 gagaggccgcagtccaagtcctcgtggtcgctatggaggccgtgctagggatctcccaac 192 |||| |||||| |||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 179 aagagcccgcagcccaagtcctcgtgggcgctatggaggccgtgacagggatctcccaac 238 Query: 193 tagtcttttggtgaggaatcttcgtcgtgattgcaggcctgatgacctccgtagaccatt 252 |||||||||||||||||||||||| ||||| || ||||||||||| || || |||||||| Sbjct: 239 tagtcttttggtgaggaatcttcgccgtgactgtaggcctgatgatctacgaagaccatt 298 Query: 253 tggaaaatttggtcggctaaaagatatatatctgccaagggattattacagtggg 307 ||||||||||||||| |||||||||||||| ||||| |||||||||| |||| Sbjct: 299 tggaaaatttggtcgtgccaaagatatatatcttccaagagattattacactggg 353 Score = 206 bits (104), Expect = 2e-49 Identities = 168/188 (89%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 850 gggagcctcgaggatttaggtttcatccaatactatgatcctgaggatgctgctgatgca 909 ||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 352 gggagcctcgaggatttgggtt-catccaatattatgatcctgaggatgctgctgatgca 410 Query: 910 aaatatcatatggatgggcagatacttcttggcagggaagtcactgttgtttttgcagag 969 ||||| || ||||||||||| || ||||||||||||||||| |||||||| ||||| ||| Sbjct: 411 aaataccacatggatgggcaaattcttcttggcagggaagttactgttgtatttgctgag 470 Query: 970 gagaacagaaagaagccttgtgagatgaggaatagggacagagtcagtagcagaggtcgt 1029 |||||||||||||| || | |||||||||| |||||| |||||| ||||||| | ||| Sbjct: 471 gagaacagaaagaaaccatctgagatgagggctagggaaagagtcggtagcagggaccgt 530 Query: 1030 tcttatga 1037 |||||||| Sbjct: 531 tcttatga 538 Score = 89.7 bits (45), Expect = 3e-14 Identities = 153/189 (80%) Strand = Plus / Plus Query: 1075 agatcacggtcacgcagccgaagctactcaccctcacctaagcaaaagcgttattcgaga 1134 ||||||||||| || || |||||||||||||| |||||||| ||||| ||||| || Sbjct: 594 agatcacggtcccgtagtcgaagctactcacctgcacctaagagaaagcactattcaagg 653 Query: 1135 tcccctcctcctcgggagagatctctctcgcgctcgccagtggacagcagatcaaggagc 1194 || ||| | | ||||||||||||||| |||||||| |||| ||||||||||||| | || Sbjct: 654 tctcctgcccgtcgggagagatctctgtcgcgctcaccagcggacagcagatcacgaagt 713 Query: 1195 agaagcccttcagaggatcgcggtagcaggtctccccacaggcagaggtccctttctgtt 1254 ||||||| || || || ||| | |||| ||| || ||||| ||||||| ||||||||| Sbjct: 714 agaagcctctctgatgaccgccgcagcaagtcacctgacagggagaggtctctttctgtt 773 Query: 1255 ggccagtga 1263 ||| |||| Sbjct: 774 agccggtga 782 >ref|NM_001056748.1| Oryza sativa (japonica cultivar-group) Os03g0374500 (Os03g0374500) mRNA, complete cds Length = 2445 Score = 248 bits (125), Expect = 5e-62 Identities = 200/225 (88%) Strand = Plus / Plus Query: 83 atgggaagaagctacgattacagtccatcaccgccaagaggttacagaaggagaggccgc 142 ||||||||| |||| ||||| |||||||||||||||||| ||||| || |||| |||| Sbjct: 1 atgggaagaggctatgattatggtccatcaccgccaagagaatacaggagaagagcccgc 60 Query: 143 agtccaagtcctcgtggtcgctatggaggccgtgctagggatctcccaactagtcttttg 202 || |||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 61 agcccaagtcctcgtgggcgctatggaggccgtgacagggatctcccaactagtcttttg 120 Query: 203 gtgaggaatcttcgtcgtgattgcaggcctgatgacctccgtagaccatttggaaaattt 262 |||||||||||||| ||||| || ||||||||||| || || |||||||||||||||||| Sbjct: 121 gtgaggaatcttcgccgtgactgtaggcctgatgatctacgaagaccatttggaaaattt 180 Query: 263 ggtcggctaaaagatatatatctgccaagggattattacagtggg 307 ||||| | |||||||||||||| ||||| |||||||||| |||| Sbjct: 181 ggtcgtgtcaaagatatatatcttccaagagattattacactggg 225 Score = 192 bits (97), Expect = 3e-45 Identities = 149/165 (90%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 850 gggagcctcgaggatttaggtttcatccaatactatgatcctgaggatgctgctgatgca 909 ||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 224 gggagcctcgaggatttgggtt-catccaatattatgatcctgaggatgctgctgatgca 282 Query: 910 aaatatcatatggatgggcagatacttcttggcagggaagtcactgttgtttttgcagag 969 ||||| || ||||||||||| || ||||||||||||||||| |||||||| ||||| ||| Sbjct: 283 aaataccacatggatgggcaaattcttcttggcagggaagttactgttgtatttgctgag 342 Query: 970 gagaacagaaagaagccttgtgagatgaggaatagggacagagtc 1014 |||||||||||||| || | |||||||||| |||||| |||||| Sbjct: 343 gagaacagaaagaaaccatctgagatgagggctagggaaagagtc 387 Score = 87.7 bits (44), Expect = 1e-13 Identities = 146/180 (81%) Strand = Plus / Plus Query: 1075 agatcacggtcacgcagccgaagctactcaccctcacctaagcaaaagcgttattcgaga 1134 ||||||||||| || || |||||||||||||| |||||||| ||||| ||||| || Sbjct: 484 agatcacggtcccgtagtcgaagctactcacctgcacctaagagaaagcactattcaagg 543 Query: 1135 tcccctcctcctcgggagagatctctctcgcgctcgccagtggacagcagatcaaggagc 1194 || ||| | | ||||||||||||||| |||||||| |||| ||||||||||||| | || Sbjct: 544 tctcctgcccgtcgggagagatctctgtcgcgctcaccagcggacagcagatcacgaagt 603 Query: 1195 agaagcccttcagaggatcgcggtagcaggtctccccacaggcagaggtccctttctgtt 1254 ||||||| || || || ||| | |||| ||| || ||||| ||||||| ||||||||| Sbjct: 604 agaagcctctctgatgaccgccgcagcaagtcacctgacagggagaggtctctttctgtt 663 >gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genomic sequence, complete sequence Length = 147130 Score = 242 bits (122), Expect = 3e-60 Identities = 175/189 (92%), Gaps = 4/189 (2%) Strand = Plus / Plus Query: 519 tttgcccacctcttgagattaacactgaacataattttttgaagacacaagtcttaagag 578 |||||||||||||| |||||||| |||| ||||||||||||||||||||| |||||||| Sbjct: 66734 tttgcccacctcttaagattaactgtgaaaataattttttgaagacacaagccttaagag 66793 Query: 579 tact--gttgaagagaagggaagaaatagagagttaagagatatgcaagttatgaagagt 636 |||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 66794 tactctgttgaagagaagggaagaaatagagtat-aagagatatgcaagttatgaagagt 66852 Query: 637 ttcaagtctatctttaaactctgatgagtgaaaaggtcagcagcctagtgcatgctttat 696 ||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||| Sbjct: 66853 ttcaagtctatctttaaactctgatgagt-acaaggtcagcagcctagtgcttgctttat 66911 Query: 697 ccgttgaaa 705 | ||||||| Sbjct: 66912 ctgttgaaa 66920 Score = 214 bits (108), Expect = 7e-52 Identities = 163/180 (90%), Gaps = 1/180 (0%) Strand = Plus / Plus Query: 835 ttgttatctgtcacagggagcctcgaggatttaggtttcatccaatactatgatcctgag 894 ||||||||||| |||||||||||||||||||| |||| ||||||||| |||||||||||| Sbjct: 67066 ttgttatctgtaacagggagcctcgaggatttgggtt-catccaatattatgatcctgag 67124 Query: 895 gatgctgctgatgcaaaatatcatatggatgggcagatacttcttggcagggaagtcact 954 |||||||||||||||||||| || ||||||||||| || ||||||||||||||||| ||| Sbjct: 67125 gatgctgctgatgcaaaataccacatggatgggcaaattcttcttggcagggaagttact 67184 Query: 955 gttgtttttgcagaggagaacagaaagaagccttgtgagatgaggaatagggacagagtc 1014 ||||| ||||| ||||||||||||||||| || | |||||||||| |||||| |||||| Sbjct: 67185 gttgtatttgctgaggagaacagaaagaaaccatctgagatgagggctagggaaagagtc 67244 Score = 182 bits (92), Expect = 3e-42 Identities = 134/148 (90%) Strand = Plus / Plus Query: 75 agatcactatgggaagaagctacgattacagtccatcaccgccaagaggttacagaagga 134 ||||||||||||||||| |||| ||||| |||||||||||||||||| ||||| || | Sbjct: 65737 agatcactatgggaagaggctatgattatggtccatcaccgccaagagaatacaggagaa 65796 Query: 135 gaggccgcagtccaagtcctcgtggtcgctatggaggccgtgctagggatctcccaacta 194 ||| |||||| |||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 65797 gagcccgcagcccaagtcctcgtgggcgctatggaggccgtgacagggatctcccaacta 65856 Query: 195 gtcttttggtgaggaatcttcgtcgtga 222 |||||||||||||||||||||| ||||| Sbjct: 65857 gtcttttggtgaggaatcttcgccgtga 65884 Score = 111 bits (56), Expect = 8e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 226 caggcctgatgacctccgtagaccatttggaaaatttggtcggctaaaagatatatatct 285 |||||||||||| || || ||||||||||||||||||||||| | |||||||||||||| Sbjct: 66438 caggcctgatgatctacgaagaccatttggaaaatttggtcgtgtcaaagatatatatct 66497 Query: 286 gccaagggattattacagtgggtaagacacctcatctcaa 325 ||||| |||||||||| |||||||| ||||||| ||||| Sbjct: 66498 tccaagagattattacactgggtaaggcacctcaactcaa 66537 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 242 bits (122), Expect = 3e-60 Identities = 175/189 (92%), Gaps = 4/189 (2%) Strand = Plus / Minus Query: 519 tttgcccacctcttgagattaacactgaacataattttttgaagacacaagtcttaagag 578 |||||||||||||| |||||||| |||| ||||||||||||||||||||| |||||||| Sbjct: 14585952 tttgcccacctcttaagattaactgtgaaaataattttttgaagacacaagccttaagag 14585893 Query: 579 tact--gttgaagagaagggaagaaatagagagttaagagatatgcaagttatgaagagt 636 |||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 14585892 tactctgttgaagagaagggaagaaatagagtat-aagagatatgcaagttatgaagagt 14585834 Query: 637 ttcaagtctatctttaaactctgatgagtgaaaaggtcagcagcctagtgcatgctttat 696 ||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||| Sbjct: 14585833 ttcaagtctatctttaaactctgatgagt-acaaggtcagcagcctagtgcttgctttat 14585775 Query: 697 ccgttgaaa 705 | ||||||| Sbjct: 14585774 ctgttgaaa 14585766 Score = 214 bits (108), Expect = 7e-52 Identities = 163/180 (90%), Gaps = 1/180 (0%) Strand = Plus / Minus Query: 835 ttgttatctgtcacagggagcctcgaggatttaggtttcatccaatactatgatcctgag 894 ||||||||||| |||||||||||||||||||| |||| ||||||||| |||||||||||| Sbjct: 14585620 ttgttatctgtaacagggagcctcgaggatttgggtt-catccaatattatgatcctgag 14585562 Query: 895 gatgctgctgatgcaaaatatcatatggatgggcagatacttcttggcagggaagtcact 954 |||||||||||||||||||| || ||||||||||| || ||||||||||||||||| ||| Sbjct: 14585561 gatgctgctgatgcaaaataccacatggatgggcaaattcttcttggcagggaagttact 14585502 Query: 955 gttgtttttgcagaggagaacagaaagaagccttgtgagatgaggaatagggacagagtc 1014 ||||| ||||| ||||||||||||||||| || | |||||||||| |||||| |||||| Sbjct: 14585501 gttgtatttgctgaggagaacagaaagaaaccatctgagatgagggctagggaaagagtc 14585442 Score = 182 bits (92), Expect = 3e-42 Identities = 134/148 (90%) Strand = Plus / Minus Query: 75 agatcactatgggaagaagctacgattacagtccatcaccgccaagaggttacagaagga 134 ||||||||||||||||| |||| ||||| |||||||||||||||||| ||||| || | Sbjct: 14586949 agatcactatgggaagaggctatgattatggtccatcaccgccaagagaatacaggagaa 14586890 Query: 135 gaggccgcagtccaagtcctcgtggtcgctatggaggccgtgctagggatctcccaacta 194 ||| |||||| |||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 14586889 gagcccgcagcccaagtcctcgtgggcgctatggaggccgtgacagggatctcccaacta 14586830 Query: 195 gtcttttggtgaggaatcttcgtcgtga 222 |||||||||||||||||||||| ||||| Sbjct: 14586829 gtcttttggtgaggaatcttcgccgtga 14586802 Score = 111 bits (56), Expect = 8e-21 Identities = 89/100 (89%) Strand = Plus / Minus Query: 226 caggcctgatgacctccgtagaccatttggaaaatttggtcggctaaaagatatatatct 285 |||||||||||| || || ||||||||||||||||||||||| | |||||||||||||| Sbjct: 14586248 caggcctgatgatctacgaagaccatttggaaaatttggtcgtgtcaaagatatatatct 14586189 Query: 286 gccaagggattattacagtgggtaagacacctcatctcaa 325 ||||| |||||||||| |||||||| ||||||| ||||| Sbjct: 14586188 tccaagagattattacactgggtaaggcacctcaactcaa 14586149 >emb|CT835132.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA011A08, full insert sequence Length = 896 Score = 204 bits (103), Expect = 7e-49 Identities = 167/187 (89%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 851 ggagcctcgaggatttaggtttcatccaatactatgatcctgaggatgctgctgatgcaa 910 |||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 115 ggagcctcgaggatttgggtt-catccaatattatgatcctgaggatgctgctgatgcaa 173 Query: 911 aatatcatatggatgggcagatacttcttggcagggaagtcactgttgtttttgcagagg 970 |||| || ||||||||||| || ||||||||||||||||| |||||||| ||||| |||| Sbjct: 174 aataccacatggatgggcaaattcttcttggcagggaagttactgttgtatttgctgagg 233 Query: 971 agaacagaaagaagccttgtgagatgaggaatagggacagagtcagtagcagaggtcgtt 1030 ||||||||||||| || | |||||||||| |||||| |||||| ||||||| | |||| Sbjct: 234 agaacagaaagaaaccatctgagatgagggctagggaaagagtcggtagcagggaccgtt 293 Query: 1031 cttatga 1037 ||||||| Sbjct: 294 cttatga 300 Score = 89.7 bits (45), Expect = 3e-14 Identities = 153/189 (80%) Strand = Plus / Plus Query: 1075 agatcacggtcacgcagccgaagctactcaccctcacctaagcaaaagcgttattcgaga 1134 ||||||||||| || || |||||||||||||| |||||||| ||||| ||||| || Sbjct: 356 agatcacggtcccgtagtcgaagctactcacctgcacctaagagaaagcactattcaagg 415 Query: 1135 tcccctcctcctcgggagagatctctctcgcgctcgccagtggacagcagatcaaggagc 1194 || ||| | | ||||||||||||||| |||||||| |||| ||||||||||||| | || Sbjct: 416 tctcctgcccgtcgggagagatctctgtcgcgctcaccagcggacagcagatcacgaagt 475 Query: 1195 agaagcccttcagaggatcgcggtagcaggtctccccacaggcagaggtccctttctgtt 1254 ||||||| || || || ||| | |||| ||| || ||||| ||||||| ||||||||| Sbjct: 476 agaagcctctctgatgaccgccgcagcaagtcacctgacagggagaggtctctttctgtt 535 Query: 1255 ggccagtga 1263 ||| |||| Sbjct: 536 agccggtga 544