BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst039k24 (868 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001055986.1| Oryza sativa (japonica cultivar-group) Os03g... 607 e-170 dbj|AK103703.1| Oryza sativa (japonica cultivar-group) cDNA clon... 607 e-170 gb|AY109149.1| Zea mays PCO079137 mRNA sequence 496 e-137 ref|NM_001049524.1| Oryza sativa (japonica cultivar-group) Os01g... 170 6e-39 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 127 8e-26 >ref|NM_001055986.1| Oryza sativa (japonica cultivar-group) Os03g0228400 (Os03g0228400) mRNA, complete cds Length = 1187 Score = 607 bits (306), Expect = e-170 Identities = 453/502 (90%) Strand = Plus / Plus Query: 32 gccatgatccaggcggcgatggtgatcagcacgcagggcaagccccgcctcctcaaattc 91 |||||||||||||| | ||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 318 gccatgatccaggccgtgatggtgatgagcacgcagggcaagccgcgcctcctcaagttc 377 Query: 92 tacagcttccagcccccagagaagcatcaggacctcgtccgcggcgtcttccaattgttg 151 ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 378 tacagctaccagccccccgagaagcatcaggacctcgtccgcggcgtcttccagttgttg 437 Query: 152 tctgcgaggcccgacagcgtgagcaatttcgttgaggccgatgcaatctttggaccggga 211 ||||| ||||| ||||| || ||||||||||| ||| ||||||||||||||||||||| Sbjct: 438 tctgcaaggccggacagtgtcagcaatttcgtcaaggttgatgcaatctttggaccggga 497 Query: 212 acgaaactggtctacaagcacttggccacattatactttgtttttgtctttgatagctcc 271 ||||| |||||||||| || ||||||||||| |||||||||||||||||||||||||| Sbjct: 498 gcgaaattggtctacaaacatttggccacattgtactttgtttttgtctttgatagctct 557 Query: 272 gagaatgaactcgccatgctagatctcatacaagtttttgttgaaacattggagagatgc 331 || |||||||| || |||| ||||| ||||||||||||||||||||||||| |||||| Sbjct: 558 gaaaatgaacttgcggtgcttgatcttgtacaagtttttgttgaaacattggacagatgc 617 Query: 332 ttcaagaatgtatgtgagcttgacgttgtatttaacttcaacaagatgcacacaattttg 391 ||||||||||| |||||||||||| | |||||||||||||||||| |||| |||||||| Sbjct: 618 ttcaagaatgtgtgtgagcttgacatcgtatttaacttcaacaagctgcatacaatttta 677 Query: 392 gatgaaatgatactggggggacaggtgattgaaacaagttcggagcaaataatgaaatct 451 |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| |||| Sbjct: 678 gatgaaatgatacttgggggacaagtgattgaaacaagttcagagcaaataatgagatct 737 Query: 452 gttgaagagattgcgaggctagagaaacagtccagcacaaccagcctcataccaaagtca 511 || ||||||||||| ||||| ||||||||||| | |||||||||||||||||| ||||| Sbjct: 738 gtcgaagagattgcaaggctggagaaacagtcaaacacaaccagcctcataccgaagtcg 797 Query: 512 atttcggagcgcttcagccgtt 533 ||||| ||||| |||||||||| Sbjct: 798 atttcagagcgtttcagccgtt 819 >dbj|AK103703.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136N08, full insert sequence Length = 1188 Score = 607 bits (306), Expect = e-170 Identities = 453/502 (90%) Strand = Plus / Plus Query: 32 gccatgatccaggcggcgatggtgatcagcacgcagggcaagccccgcctcctcaaattc 91 |||||||||||||| | ||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 319 gccatgatccaggccgtgatggtgatgagcacgcagggcaagccgcgcctcctcaagttc 378 Query: 92 tacagcttccagcccccagagaagcatcaggacctcgtccgcggcgtcttccaattgttg 151 ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 379 tacagctaccagccccccgagaagcatcaggacctcgtccgcggcgtcttccagttgttg 438 Query: 152 tctgcgaggcccgacagcgtgagcaatttcgttgaggccgatgcaatctttggaccggga 211 ||||| ||||| ||||| || ||||||||||| ||| ||||||||||||||||||||| Sbjct: 439 tctgcaaggccggacagtgtcagcaatttcgtcaaggttgatgcaatctttggaccggga 498 Query: 212 acgaaactggtctacaagcacttggccacattatactttgtttttgtctttgatagctcc 271 ||||| |||||||||| || ||||||||||| |||||||||||||||||||||||||| Sbjct: 499 gcgaaattggtctacaaacatttggccacattgtactttgtttttgtctttgatagctct 558 Query: 272 gagaatgaactcgccatgctagatctcatacaagtttttgttgaaacattggagagatgc 331 || |||||||| || |||| ||||| ||||||||||||||||||||||||| |||||| Sbjct: 559 gaaaatgaacttgcggtgcttgatcttgtacaagtttttgttgaaacattggacagatgc 618 Query: 332 ttcaagaatgtatgtgagcttgacgttgtatttaacttcaacaagatgcacacaattttg 391 ||||||||||| |||||||||||| | |||||||||||||||||| |||| |||||||| Sbjct: 619 ttcaagaatgtgtgtgagcttgacatcgtatttaacttcaacaagctgcatacaatttta 678 Query: 392 gatgaaatgatactggggggacaggtgattgaaacaagttcggagcaaataatgaaatct 451 |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| |||| Sbjct: 679 gatgaaatgatacttgggggacaagtgattgaaacaagttcagagcaaataatgagatct 738 Query: 452 gttgaagagattgcgaggctagagaaacagtccagcacaaccagcctcataccaaagtca 511 || ||||||||||| ||||| ||||||||||| | |||||||||||||||||| ||||| Sbjct: 739 gtcgaagagattgcaaggctggagaaacagtcaaacacaaccagcctcataccgaagtcg 798 Query: 512 atttcggagcgcttcagccgtt 533 ||||| ||||| |||||||||| Sbjct: 799 atttcagagcgtttcagccgtt 820 >gb|AY109149.1| Zea mays PCO079137 mRNA sequence Length = 1028 Score = 496 bits (250), Expect = e-137 Identities = 451/518 (87%) Strand = Plus / Plus Query: 32 gccatgatccaggcggcgatggtgatcagcacgcagggcaagccccgcctcctcaaattc 91 |||||||||||||||| ||||||||||||||| |||| |||||||||||| ||||| ||| Sbjct: 292 gccatgatccaggcggtgatggtgatcagcacccaggccaagccccgccttctcaagttc 351 Query: 92 tacagcttccagcccccagagaagcatcaggacctcgtccgcggcgtcttccaattgttg 151 ||||| |||||||| || |||||||||||||||||||||||| | ||||||||||| | Sbjct: 352 tacagtttccagccacccgagaagcatcaggacctcgtccgctgtgtcttccaattactc 411 Query: 152 tctgcgaggcccgacagcgtgagcaatttcgttgaggccgatgcaatctttggaccggga 211 ||||| |||||||| |||| ||||||||| || ||| || | |||||||| |||||| Sbjct: 412 tctgcaaggcccgagagcgcgagcaattttgtcaaggtggactccatctttggcccggga 471 Query: 212 acgaaactggtctacaagcacttggccacattatactttgtttttgtctttgatagctcc 271 || ||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 472 acaaaaatggtctacaagcatttggccacactatactttgtttttgtctttgatagctct 531 Query: 272 gagaatgaactcgccatgctagatctcatacaagtttttgttgaaacattggagagatgc 331 ||||| || || |||||||| || ||| ||||||| ||||||||||||||||| |||||| Sbjct: 532 gagaacgagcttgccatgctcgacctcgtacaagtgtttgttgaaacattggacagatgc 591 Query: 332 ttcaagaatgtatgtgagcttgacgttgtatttaacttcaacaagatgcacacaattttg 391 |||||||||||||| ||||||||| | |||||||||||||||||| ||||||| |||||| Sbjct: 592 ttcaagaatgtatgcgagcttgacatcgtatttaacttcaacaagctgcacaccattttg 651 Query: 392 gatgaaatgatactggggggacaggtgattgaaacaagttcggagcaaataatgaaatct 451 ||||| |||||| ||||||||||||||| ||||||||||| || || |||||||||||| Sbjct: 652 gatgagatgatatcggggggacaggtgatcgaaacaagttcagaacagataatgaaatct 711 Query: 452 gttgaagagattgcgaggctagagaaacagtccagcacaaccagcctcataccaaagtca 511 || |||||||||| ||||| |||||||| || |||||||||||| ||||||| ||||| Sbjct: 712 gtggaagagattgaaaggctggagaaacaatcgagcacaaccagcttcatacccaagtcg 771 Query: 512 atttcggagcgcttcagccgttaaatttccactcgttt 549 ||| | ||||| || | ||||| | |||||||||||| Sbjct: 772 attacagagcgttttacccgttgagcttccactcgttt 809 >ref|NM_001049524.1| Oryza sativa (japonica cultivar-group) Os01g0353500 (Os01g0353500) mRNA, complete cds Length = 222 Score = 170 bits (86), Expect = 6e-39 Identities = 155/178 (87%) Strand = Plus / Plus Query: 105 ccccagagaagcatcaggacctcgtccgcggcgtcttccaattgttgtctgcgaggcccg 164 |||| |||||||||||||| |||||||||| ||||||||| ||||||||||| ||||| | Sbjct: 8 cccccgagaagcatcaggaactcgtccgcgccgtcttccagttgttgtctgcaaggccgg 67 Query: 165 acagcgtgagcaatttcgttgaggccgatgcaatctttggaccgggaacgaaactggtct 224 |||| || ||||||||||| ||| ||||||||||||||||||||| ||||| || ||| Sbjct: 68 acagtgtaagcaatttcgtcaaggttgatgcaatctttggaccgggagcgaaattgatct 127 Query: 225 acaagcacttggccacattatactttgtttttgtctttgatagctccgagaatgaact 282 |||| || ||||||||||| ||||| | ||||||||||||| |||| || |||||||| Sbjct: 128 acaaacatttggccacattgtacttaggttttgtctttgatggctctgaaaatgaact 185 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 127 bits (64), Expect = 8e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 378 tgcacacaattttggatgaaatgatactggggggacaggtgattgaaacaagttcggagc 437 |||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| |||| Sbjct: 14158163 tgcatacaattttggatgaaatgatacttgggggacaagtgattgaaacaagttcagagc 14158222 Query: 438 aaataatgaaatctgttgaagagattgc 465 ||||||||| |||||| ||||||||||| Sbjct: 14158223 aaataatgagatctgtagaagagattgc 14158250 Score = 113 bits (57), Expect = 1e-21 Identities = 69/73 (94%) Strand = Plus / Plus Query: 304 agtttttgttgaaacattggagagatgcttcaagaatgtatgtgagcttgacgttgtatt 363 ||||||||||||||||||||| ||||||||||||||||| ||||||||| || ||||||| Sbjct: 14157661 agtttttgttgaaacattggacagatgcttcaagaatgtgtgtgagcttcacattgtatt 14157720 Query: 364 taacttcaacaag 376 ||||||||||||| Sbjct: 14157721 taacttcaacaag 14157733 Score = 85.7 bits (43), Expect = 3e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 32 gccatgatccaggcggcgatggtgatcagcacgcagggcaagccccgcctcctcaaattc 91 |||||||||||||| | |||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 14154119 gccatgatccaggccgtgatggtcatgagcacgcagggcaagccgcgcctcctcaagttc 14154178 Query: 92 tacagct 98 ||||||| Sbjct: 14154179 tacagct 14154185