BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst039g20 (965 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001063684.1| Oryza sativa (japonica cultivar-group) Os06g... 527 e-146 dbj|AK111859.1| Oryza sativa (japonica cultivar-group) cDNA clon... 527 e-146 gb|AY345223.2| Oryza sativa (japonica cultivar-group) transcript... 452 e-123 gb|DQ022679.1| Triticum aestivum MADS box protein VRT-2 mRNA, co... 428 e-116 gb|DQ110011.1| Lolium perenne MADS16 mRNA, complete cds 373 e-100 >ref|NM_001063684.1| Oryza sativa (japonica cultivar-group) Os06g0217300 (Os06g0217300) mRNA, complete cds Length = 1217 Score = 527 bits (266), Expect = e-146 Identities = 436/492 (88%), Gaps = 3/492 (0%) Strand = Plus / Plus Query: 118 tatgaacgagatcgttgacaagtacagtacacattctaagatcctggggaaatcagatca 177 ||||||||||||| |||||||||| | ||||||||| |||| |||||||||| ||||| | Sbjct: 308 tatgaacgagatcattgacaagtatactacacattcaaagaacctggggaaaacagataa 367 Query: 178 acagccttcccttgatttgaatttagagcacagcaagtatagcagtttgaatgaacagct 237 |||||||| ||||| ||||||||||||||||||||| |||||||||||||||||| || Sbjct: 368 gcagccttctattgatctgaatttagagcacagcaagtgtagcagtttgaatgaacaact 427 Query: 238 cgcagaagcaagtcttcaacttagacagatgagaggcgaggagcttgaggggttgagcgt 297 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 428 ggcagaagcaagtcttcaacttagacagatgagaggtgaggagcttgagggattgagtgt 487 Query: 298 ggaggaactgcagcagatggaaaggaatcttgaagcaggactgcagagggtgctttctac 357 ||| || |||||||||||||||| ||| || || |||||||||||| ||||||| | ||| Sbjct: 488 ggaagagctgcagcagatggaaaagaacctcgaggcaggactgcagcgggtgctctgtac 547 Query: 358 aaaggactgccaattcatgcaacaaatcagtgaactccaacaaaagggcacacagctggc 417 ||||||| |||||||||||| |||||||||| ||||||| |||||||| |||||||| Sbjct: 548 aaaggaccagcaattcatgcaagaaatcagtgagctccaacgaaagggcattcagctggc 607 Query: 418 agagcagaatatgcgcttgagaaaccaaatgcctcaggtgccaacggccggcatgttggt 477 ||| ||||||||||| | ||| ||||||||||||||||||| || || ||| |||| Sbjct: 608 agaagagaatatgcgcctcagagaccaaatgcctcaggtgcctactgctggc---ttggc 664 Query: 478 ggttgctgatactgaaaatcttctcaccgaagatggacagtcatctgaatctgtgatgac 537 |||| |||||||||||||| |||| || ||||||||||| |||||||||||||||||||| Sbjct: 665 ggttcctgatactgaaaatgttcttactgaagatggacaatcatctgaatctgtgatgac 724 Query: 538 tgcattgcattcgggaagctcgcaggacaatgatgacggctctgatatatccctgaaact 597 |||||| ||||||||||||||||||| |||||||| || |||||||||||||||||||| Sbjct: 725 tgcattaaattcgggaagctcgcaggataatgatgatggttctgatatatccctgaaact 784 Query: 598 agggttgccttg 609 |||||||||||| Sbjct: 785 agggttgccttg 796 >dbj|AK111859.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024G19, full insert sequence Length = 1218 Score = 527 bits (266), Expect = e-146 Identities = 436/492 (88%), Gaps = 3/492 (0%) Strand = Plus / Plus Query: 118 tatgaacgagatcgttgacaagtacagtacacattctaagatcctggggaaatcagatca 177 ||||||||||||| |||||||||| | ||||||||| |||| |||||||||| ||||| | Sbjct: 308 tatgaacgagatcattgacaagtatactacacattcaaagaacctggggaaaacagataa 367 Query: 178 acagccttcccttgatttgaatttagagcacagcaagtatagcagtttgaatgaacagct 237 |||||||| ||||| ||||||||||||||||||||| |||||||||||||||||| || Sbjct: 368 gcagccttctattgatctgaatttagagcacagcaagtgtagcagtttgaatgaacaact 427 Query: 238 cgcagaagcaagtcttcaacttagacagatgagaggcgaggagcttgaggggttgagcgt 297 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 428 ggcagaagcaagtcttcaacttagacagatgagaggtgaggagcttgagggattgagtgt 487 Query: 298 ggaggaactgcagcagatggaaaggaatcttgaagcaggactgcagagggtgctttctac 357 ||| || |||||||||||||||| ||| || || |||||||||||| ||||||| | ||| Sbjct: 488 ggaagagctgcagcagatggaaaagaacctcgaggcaggactgcagcgggtgctatgtac 547 Query: 358 aaaggactgccaattcatgcaacaaatcagtgaactccaacaaaagggcacacagctggc 417 ||||||| |||||||||||| |||||||||| ||||||| |||||||| |||||||| Sbjct: 548 aaaggaccagcaattcatgcaagaaatcagtgagctccaacgaaagggcattcagctggc 607 Query: 418 agagcagaatatgcgcttgagaaaccaaatgcctcaggtgccaacggccggcatgttggt 477 ||| ||||||||||| | ||| ||||||||||||||||||| || || ||| |||| Sbjct: 608 agaagagaatatgcgcctcagagaccaaatgcctcaggtgcctactgctggc---ttggc 664 Query: 478 ggttgctgatactgaaaatcttctcaccgaagatggacagtcatctgaatctgtgatgac 537 |||| |||||||||||||| |||| || ||||||||||| |||||||||||||||||||| Sbjct: 665 ggttcctgatactgaaaatgttcttactgaagatggacaatcatctgaatctgtgatgac 724 Query: 538 tgcattgcattcgggaagctcgcaggacaatgatgacggctctgatatatccctgaaact 597 |||||| ||||||||||||||||||| |||||||| || |||||||||||||||||||| Sbjct: 725 tgcattaaattcgggaagctcgcaggataatgatgatggttctgatatatccctgaaact 784 Query: 598 agggttgccttg 609 |||||||||||| Sbjct: 785 agggttgccttg 796 >gb|AY345223.2| Oryza sativa (japonica cultivar-group) transcription factor MADS55 mRNA, complete cds Length = 738 Score = 452 bits (228), Expect = e-123 Identities = 365/410 (89%), Gaps = 3/410 (0%) Strand = Plus / Plus Query: 200 ttagagcacagcaagtatagcagtttgaatgaacagctcgcagaagcaagtcttcaactt 259 |||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||| Sbjct: 331 ttagagcacagcaagtgtagcagtttgaatgaacaactggcagaagcaagtcttcaactt 390 Query: 260 agacagatgagaggcgaggagcttgaggggttgagcgtggaggaactgcagcagatggaa 319 |||||||||||||| |||||||||||||| ||||| ||||| || ||||||||||||||| Sbjct: 391 agacagatgagaggtgaggagcttgagggattgagtgtggaagagctgcagcagatggaa 450 Query: 320 aggaatcttgaagcaggactgcagagggtgctttctacaaaggactgccaattcatgcaa 379 | ||| || || |||||||||||| ||||||| | |||||||||| |||||||||||| Sbjct: 451 aagaacctcgaggcaggactgcagcgggtgctctgtacaaaggaccagcaattcatgcaa 510 Query: 380 caaatcagtgaactccaacaaaagggcacacagctggcagagcagaatatgcgcttgaga 439 |||||||||| ||||||| |||||||| ||||||||||| ||||||||||| | ||| Sbjct: 511 gaaatcagtgagctccaacgaaagggcattcagctggcagaagagaatatgcgcctcaga 570 Query: 440 aaccaaatgcctcaggtgccaacggccggcatgttggtggttgctgatactgaaaatctt 499 ||||||||||||||||||| || || ||| |||| |||| |||||||||||||| || Sbjct: 571 gaccaaatgcctcaggtgcctactgctggc---ttggcggttcctgatactgaaaatgtt 627 Query: 500 ctcaccgaagatggacagtcatctgaatctgtgatgactgcattgcattcgggaagctcg 559 || || ||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 628 cttactgaagatggacaatcatctgaatctgtgatgactgcattaaattcgggaagctcg 687 Query: 560 caggacaatgatgacggctctgatatatccctgaaactagggttgccttg 609 ||||| |||||||| || |||||||||||||||||||||||||||||||| Sbjct: 688 caggataatgatgatggttctgatatatccctgaaactagggttgccttg 737 Score = 79.8 bits (40), Expect = 2e-11 Identities = 73/84 (86%) Strand = Plus / Plus Query: 118 tatgaacgagatcgttgacaagtacagtacacattctaagatcctggggaaatcagatca 177 ||||||||||||| |||||||||| | ||||||||| |||| |||||||||| ||||| | Sbjct: 183 tatgaacgagatcattgacaagtatactacacattcaaagaacctggggaaaacagataa 242 Query: 178 acagccttcccttgatttgaattt 201 |||||||| ||||| ||||||| Sbjct: 243 gcagccttctattgatctgaattt 266 >gb|DQ022679.1| Triticum aestivum MADS box protein VRT-2 mRNA, complete cds Length = 1068 Score = 428 bits (216), Expect = e-116 Identities = 432/504 (85%) Strand = Plus / Plus Query: 117 gtatgaacgagatcgttgacaagtacagtacacattctaagatcctggggaaatcagatc 176 |||||||||||||| |||||||||| ||||| ||||| |||| |||||||||||| |||| Sbjct: 284 gtatgaacgagatcattgacaagtatagtactcattcaaagaacctggggaaatctgatc 343 Query: 177 aacagccttcccttgatttgaatttagagcacagcaagtatagcagtttgaatgaacagc 236 | ||||| | |||| || |||||||||||| |||||||| ||||||||||||||| | Sbjct: 344 agcagccggctattgacttaaatttagagcactgcaagtatgacagtttgaatgaacaac 403 Query: 237 tcgcagaagcaagtcttcaacttagacagatgagaggcgaggagcttgaggggttgagcg 296 |||||||||||||||||| ||||||||| |||||||| ||||| ||||| || |||| | Sbjct: 404 tcgcagaagcaagtcttcgacttagacacatgagaggtgaggaacttgacggactgagtg 463 Query: 297 tggaggaactgcagcagatggaaaggaatcttgaagcaggactgcagagggtgctttcta 356 | | || ||||||||||||||| |||||| ||| ||||| |||| | |||||||| || Sbjct: 464 tcggtgagttgcagcagatggaaaagaatctcgaaacaggattgcaaaaggtgctttgta 523 Query: 357 caaaggactgccaattcatgcaacaaatcagtgaactccaacaaaagggcacacagctgg 416 |||||||| | ||||||||||||||||||||||| |||||||||||||| || ||||||| Sbjct: 524 caaaggaccggcaattcatgcaacaaatcagtgacctccaacaaaagggaacgcagctgg 583 Query: 417 cagagcagaatatgcgcttgagaaaccaaatgcctcaggtgccaacggccggcatgttgg 476 ||||| | ||||||||||||| ||||||||||| | |||||||||| | ||| | ||| Sbjct: 584 cagaggaaaatatgcgcttgaaaaaccaaatgcatgaggtgccaactgttagcacggtgg 643 Query: 477 tggttgctgatactgaaaatcttctcaccgaagatggacagtcatctgaatctgtgatga 536 ||||| || |||||||| || || | ||||||| || |||||||| |||||||||| Sbjct: 644 ccgttgccgaagctgaaaatgttgtccctgaagatgctcattcatctgactctgtgatga 703 Query: 537 ctgcattgcattcgggaagctcgcaggacaatgatgacggctctgatatatccctgaaac 596 | ||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 704 cggcagtacattcgggaagctcgcaggacaatgatgacggttctgatatatccctgaaac 763 Query: 597 tagggttgccttggaagtaaggac 620 ||| ||| |||||||||||||||| Sbjct: 764 tagcgttaccttggaagtaaggac 787 >gb|DQ110011.1| Lolium perenne MADS16 mRNA, complete cds Length = 1121 Score = 373 bits (188), Expect = e-100 Identities = 314/356 (88%) Strand = Plus / Plus Query: 117 gtatgaacgagatcgttgacaagtacagtacacattctaagatcctggggaaatcagatc 176 ||||| |||||||| |||||||||| ||| | ||||| |||| ||||||||||||| | Sbjct: 280 gtatggacgagatcattgacaagtatagtgctcattcaaagaacctggggaaatcacaag 339 Query: 177 aacagccttcccttgatttgaatttagagcacagcaagtatagcagtttgaatgaacagc 236 | ||||| | |||||||||||| |||||||||||||||||| ||||||||||||| | | Sbjct: 340 agaagcctgcacttgatttgaatgtagagcacagcaagtataacagtttgaatgaaaaac 399 Query: 237 tcgcagaagcaagtcttcaacttagacagatgagaggcgaggagcttgaggggttgagcg 296 | || |||||||||||||| |||||||| |||||||| ||||| |||| ||| |||| | Sbjct: 400 ttgctgaagcaagtcttcaccttagacacatgagaggtgaggaacttgggggactgagtg 459 Query: 297 tggaggaactgcagcagatggaaaggaatcttgaagcaggactgcagagggtgctttcta 356 | | |||||||||||||||||||| | |||||||| ||||||| ||||||||||||| || Sbjct: 460 ttggggaactgcagcagatggaaaaggatcttgaaacaggactacagagggtgctttgta 519 Query: 357 caaaggactgccaattcatgcaacaaatcagtgaactccaacaaaagggcacacagctgg 416 |||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 520 caaaggaccaacaattcatgcaacagatcagtgacctccaacaaaagggcacacagctgg 579 Query: 417 cagagcagaatatgcgcttgagaaaccaaatgcctcaggtgccaacggccggcatg 472 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 580 cagaagagaatatgcgcttgagaaaccaaatgcctcaggtgccaacggccggcatg 635 Score = 139 bits (70), Expect = 2e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 518 tcatctgaatctgtgatgactgcattgcattcgggaagctcgcaggacaatgatgacggc 577 |||||||||||||||||||| ||| | ||||| |||||||||||||||||||| ||||| Sbjct: 660 tcatctgaatctgtgatgacggcagtacattccggaagctcgcaggacaatgacgacggt 719 Query: 578 tctgatatatccctgaaactagggttgccttggaagtaagga 619 ||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 720 tctgatatatcgctgaaactagcgttgccttggaagtaagga 761