BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst039e17 (1136 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001052395.1| Oryza sativa (japonica cultivar-group) Os02g... 468 e-128 dbj|AK099428.1| Oryza sativa (japonica cultivar-group) cDNA clon... 460 e-126 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 186 1e-43 dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic D... 186 1e-43 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 111 6e-21 >ref|NM_001052395.1| Oryza sativa (japonica cultivar-group) Os02g0141500 (Os02g0141500) mRNA, complete cds Length = 1207 Score = 468 bits (236), Expect = e-128 Identities = 580/692 (83%), Gaps = 2/692 (0%) Strand = Plus / Plus Query: 210 cggatgatggtagggttcatggggaagaggaaggagctggatcaggtggtcgacggcctc 269 ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 179 cggatgatggtggggttcatggggaagaggaaggagctggaccaggtggtggacggcctc 238 Query: 270 tccgacttctccctctccggcccggccgccaagagccgcagattggaccctgggctccca 329 ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 239 tccgacttctccctctccggccccgccgccaagagccgcagattggatattgggcttcca 298 Query: 330 cctattatggaagaagaaccaccggctccttccatcacatttcaacatgagatgctggga 389 ||||||||||||||||| | || | ||||||||| ||||| |||||||||||| ||| Sbjct: 299 cctattatggaagaagagacgccaggtccttccatgccatttggacatgagatgctagga 358 Query: 390 gagaaaatcaacagtggtgttagcatgcccagtttggaagacatgatggaaggtgccatg 449 ||| ||||| |||||| |||||||||||||| | | ||||||||| ||| |||||||||| Sbjct: 359 gaggaaatccacagtgttgttagcatgcccattatagaagacatgctgggaggtgccatg 418 Query: 450 ccatctcatctgtctagcgaggacggggcacttgttttatacaagccagtagataaccct 509 |||||||| || || |||||| ||||||||||||||||||| ||||||||||| || Sbjct: 419 gaatctcatccatcaagtgaggacaaggcacttgttttatacaagtcagtagataacact 478 Query: 510 atactctttggtcctggtatctcaaaccattcaatcatagtcagttcagacttgatacgt 569 | | |||||||||| | ||| |||| |||||||||| ||||| |||||||||||||| Sbjct: 479 gcatgcattggtcctgggacctcgaacccttcaatcataatcagtccagacttgatacgt 538 Query: 570 ggtctaaaaaatcaagctttcgatcaagggaattatcatgggctggaggacaattcccct 629 ||||||| ||||| ||||| ||| |||| | ||| |||||||||||||| || ||| Sbjct: 539 agtctaaagaatcaggcttttatgcaaaggaactttcacgggctggaggacaaatctcct 598 Query: 630 gagcgcagcaattgcttggctctagttccttgggtgccaccacagatcgctatgacatct 689 | | ||||||| | ||||||| ||||||||||| |||||||| || || | | |||| Sbjct: 599 gggtgcagcaacttcttggctttagttccttggacaccaccacaaattgccacggtatct 658 Query: 690 aattggtctgctactcaaccagaaaacacagaaactctt-gaggtgccaatggaggctga 748 |||||||||||| | | ||||||| | || || |||| || |||||||||||| |||| Sbjct: 659 aattggtctgcttcagattcagaaaagagag-aattcttcgaagtgccaatggagtctga 717 Query: 749 cgagacagaagttgtttctatggacgtcgaggaagtgcctcaagcaactaccgggggaat 808 ||||||||||| | |||||||||||| |||||| || |||||| | || | ||| Sbjct: 718 tgagacagaagtcgattctatggacgttgaggaatctccggaagcaaatgtcgcagcaat 777 Query: 809 cgacggtgagaaccttcaccagtggcaacaacactgtatgaccccaccgtcactgccaaa 868 ||| || || | |||||||||||||||||||||||| ||||||||| |||| || ||||| Sbjct: 778 cgatggcgaaagccttcaccagtggcaacaacactgcatgaccccatcgtcgctaccaaa 837 Query: 869 cccgtcagcccatgttatgtggtcaaggtgac 900 ||| ||||| | |||||||||||||||||||| Sbjct: 838 cccttcagcacctgttatgtggtcaaggtgac 869 >dbj|AK099428.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013011N11, full insert sequence Length = 1207 Score = 460 bits (232), Expect = e-126 Identities = 580/692 (83%), Gaps = 3/692 (0%) Strand = Plus / Plus Query: 210 cggatgatggtagggttcatggggaagaggaaggagctggatcaggtggtcgacggcctc 269 ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 180 cggatgatggtggggttcatggggaagaggaaggagctggaccaggtggtggacggcctc 239 Query: 270 tccgacttctccctctccggcccggccgccaagagccgcagattggaccctgggctccca 329 ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 240 tccgacttctccctctccggccccgccgccaagagccgcagattggatattgggcttcca 299 Query: 330 cctattatggaagaagaaccaccggctccttccatcacatttcaacatgagatgctggga 389 ||||||||||||||||| | || | ||||||||| ||||| |||||||||||| ||| Sbjct: 300 cctattatggaagaagagacgccaggtccttccatgccatttggacatgagatgctagga 359 Query: 390 gagaaaatcaacagtggtgttagcatgcccagtttggaagacatgatggaaggtgccatg 449 ||| ||||| |||||| |||||||||||||| | | ||||||||| ||| |||||||||| Sbjct: 360 gaggaaatccacagtgttgttagcatgcccattatagaagacatgctgggaggtgccatg 419 Query: 450 ccatctcatctgtctagcgaggacggggcacttgttttatacaagccagtagataaccct 509 |||||||| || || |||||| ||||||||||||||||||| ||||||||||| || Sbjct: 420 gaatctcatccatcaagtgaggac-aggcacttgttttatacaagtcagtagataacact 478 Query: 510 atactctttggtcctggtatctcaaaccattcaatcatagtcagttcagacttgatacgt 569 | | |||||||||| | ||| |||| |||||||||| ||||| |||||||||||||| Sbjct: 479 gcatgcattggtcctgggacctcgaacccttcaatcataatcagtccagacttgatacgt 538 Query: 570 ggtctaaaaaatcaagctttcgatcaagggaattatcatgggctggaggacaattcccct 629 ||||||| ||||| ||||| ||| |||| | ||| |||||||||||||| || ||| Sbjct: 539 agtctaaagaatcaggcttttatgcaaaggaactttcacgggctggaggacaaatctcct 598 Query: 630 gagcgcagcaattgcttggctctagttccttgggtgccaccacagatcgctatgacatct 689 | | ||||||| | ||||||| ||||||||||| |||||||| || || | | |||| Sbjct: 599 gggtgcagcaacttcttggctttagttccttggacaccaccacaaattgccacggtatct 658 Query: 690 aattggtctgctactcaaccagaaaacacagaaactctt-gaggtgccaatggaggctga 748 |||||||||||| | | ||||||| | || || |||| || |||||||||||| |||| Sbjct: 659 aattggtctgcttcagattcagaaaagagag-aattcttcgaagtgccaatggagtctga 717 Query: 749 cgagacagaagttgtttctatggacgtcgaggaagtgcctcaagcaactaccgggggaat 808 ||||||||||| | |||||||||||| |||||| || |||||| | || | ||| Sbjct: 718 tgagacagaagtcgattctatggacgttgaggaatctccggaagcaaatgtcgcagcaat 777 Query: 809 cgacggtgagaaccttcaccagtggcaacaacactgtatgaccccaccgtcactgccaaa 868 ||| || || | |||||||||||||||||||||||| ||||||||| |||| || ||||| Sbjct: 778 cgatggcgaaagccttcaccagtggcaacaacactgcatgaccccatcgtcgctaccaaa 837 Query: 869 cccgtcagcccatgttatgtggtcaaggtgac 900 ||| ||||| | |||||||||||||||||||| Sbjct: 838 cccttcagcacctgttatgtggtcaaggtgac 869 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 186 bits (94), Expect = 1e-43 Identities = 217/258 (84%) Strand = Plus / Minus Query: 320 tgggctcccacctattatggaagaagaaccaccggctccttccatcacatttcaacatga 379 |||||| |||||||||||||||||||| | || | ||||||||| ||||| |||||| Sbjct: 2244491 tgggcttccacctattatggaagaagagacgccaggtccttccatgccatttggacatga 2244432 Query: 380 gatgctgggagagaaaatcaacagtggtgttagcatgcccagtttggaagacatgatgga 439 |||||| |||||| ||||| |||||| |||||||||||||| | | ||||||||| ||| Sbjct: 2244431 gatgctaggagaggaaatccacagtgttgttagcatgcccattatagaagacatgctggg 2244372 Query: 440 aggtgccatgccatctcatctgtctagcgaggacggggcacttgttttatacaagccagt 499 |||||||||| |||||||| || || |||||| ||||||||||||||||||| |||| Sbjct: 2244371 aggtgccatggaatctcatccatcaagtgaggacaaggcacttgttttatacaagtcagt 2244312 Query: 500 agataaccctatactctttggtcctggtatctcaaaccattcaatcatagtcagttcaga 559 ||||||| || | | |||||||||| | ||| |||| |||||||||| ||||| |||| Sbjct: 2244311 agataacactgcatgcattggtcctgggacctcgaacccttcaatcataatcagtccaga 2244252 Query: 560 cttgatacgtggtctaaa 577 |||||||||| ||||||| Sbjct: 2244251 cttgatacgtagtctaaa 2244234 Score = 178 bits (90), Expect = 3e-41 Identities = 102/106 (96%) Strand = Plus / Minus Query: 210 cggatgatggtagggttcatggggaagaggaaggagctggatcaggtggtcgacggcctc 269 ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2245991 cggatgatggtggggttcatggggaagaggaaggagctggaccaggtggtggacggcctc 2245932 Query: 270 tccgacttctccctctccggcccggccgccaagagccgcagattgg 315 ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2245931 tccgacttctccctctccggccccgccgccaagagccgcagattgg 2245886 Score = 137 bits (69), Expect = 1e-28 Identities = 239/293 (81%), Gaps = 2/293 (0%) Strand = Plus / Minus Query: 609 gggctggaggacaattcccctgagcgcagcaattgcttggctctagttccttgggtgcca 668 |||||||||||||| || |||| | ||||||| | ||||||| ||||||||||| ||| Sbjct: 2243585 gggctggaggacaaatctcctgggtgcagcaacttcttggctttagttccttggacacca 2243526 Query: 669 ccacagatcgctatgacatctaattggtctgctactcaaccagaaaacacagaaactctt 728 ||||| || || | | |||||||||||||||| | | ||||||| | |||| |||| Sbjct: 2243525 ccacaaattgccacggtatctaattggtctgcttcagattcagaaaagagagaat-tctt 2243467 Query: 729 -gaggtgccaatggaggctgacgagacagaagttgtttctatggacgtcgaggaagtgcc 787 || |||||||||||| |||| ||||||||||| | |||||||||||| |||||| || Sbjct: 2243466 cgaagtgccaatggagtctgatgagacagaagtcgattctatggacgttgaggaatctcc 2243407 Query: 788 tcaagcaactaccgggggaatcgacggtgagaaccttcaccagtggcaacaacactgtat 847 |||||| | || | |||||| || || | |||||||||||||||||||||||| || Sbjct: 2243406 ggaagcaaatgtcgcagcaatcgatggcgaaagccttcaccagtggcaacaacactgcat 2243347 Query: 848 gaccccaccgtcactgccaaacccgtcagcccatgttatgtggtcaaggtgac 900 ||||||| |||| || |||||||| ||||| | |||||||||||||||||||| Sbjct: 2243346 gaccccatcgtcgctaccaaacccttcagcacctgttatgtggtcaaggtgac 2243294 Score = 89.7 bits (45), Expect = 2e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 828 cagtggcaacaacactgtatgaccccaccgtcactgccaaacccgtcagcccatgttatg 887 ||||||||||||||||| ||||||||| ||||||| |||||||| ||||| | ||||||| Sbjct: 32951543 cagtggcaacaacactgcatgaccccatcgtcactaccaaacccttcagcacctgttatg 32951484 Query: 888 tggtcaaggtgac 900 || |||||||||| Sbjct: 32951483 tgttcaaggtgac 32951471 >dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_E07 Length = 113187 Score = 186 bits (94), Expect = 1e-43 Identities = 217/258 (84%) Strand = Plus / Minus Query: 320 tgggctcccacctattatggaagaagaaccaccggctccttccatcacatttcaacatga 379 |||||| |||||||||||||||||||| | || | ||||||||| ||||| |||||| Sbjct: 31440 tgggcttccacctattatggaagaagagacgccaggtccttccatgccatttggacatga 31381 Query: 380 gatgctgggagagaaaatcaacagtggtgttagcatgcccagtttggaagacatgatgga 439 |||||| |||||| ||||| |||||| |||||||||||||| | | ||||||||| ||| Sbjct: 31380 gatgctaggagaggaaatccacagtgttgttagcatgcccattatagaagacatgctggg 31321 Query: 440 aggtgccatgccatctcatctgtctagcgaggacggggcacttgttttatacaagccagt 499 |||||||||| |||||||| || || |||||| ||||||||||||||||||| |||| Sbjct: 31320 aggtgccatggaatctcatccatcaagtgaggacaaggcacttgttttatacaagtcagt 31261 Query: 500 agataaccctatactctttggtcctggtatctcaaaccattcaatcatagtcagttcaga 559 ||||||| || | | |||||||||| | ||| |||| |||||||||| ||||| |||| Sbjct: 31260 agataacactgcatgcattggtcctgggacctcgaacccttcaatcataatcagtccaga 31201 Query: 560 cttgatacgtggtctaaa 577 |||||||||| ||||||| Sbjct: 31200 cttgatacgtagtctaaa 31183 Score = 178 bits (90), Expect = 3e-41 Identities = 102/106 (96%) Strand = Plus / Minus Query: 210 cggatgatggtagggttcatggggaagaggaaggagctggatcaggtggtcgacggcctc 269 ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 32940 cggatgatggtggggttcatggggaagaggaaggagctggaccaggtggtggacggcctc 32881 Query: 270 tccgacttctccctctccggcccggccgccaagagccgcagattgg 315 ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 32880 tccgacttctccctctccggccccgccgccaagagccgcagattgg 32835 Score = 137 bits (69), Expect = 1e-28 Identities = 239/293 (81%), Gaps = 2/293 (0%) Strand = Plus / Minus Query: 609 gggctggaggacaattcccctgagcgcagcaattgcttggctctagttccttgggtgcca 668 |||||||||||||| || |||| | ||||||| | ||||||| ||||||||||| ||| Sbjct: 30534 gggctggaggacaaatctcctgggtgcagcaacttcttggctttagttccttggacacca 30475 Query: 669 ccacagatcgctatgacatctaattggtctgctactcaaccagaaaacacagaaactctt 728 ||||| || || | | |||||||||||||||| | | ||||||| | |||| |||| Sbjct: 30474 ccacaaattgccacggtatctaattggtctgcttcagattcagaaaagagagaat-tctt 30416 Query: 729 -gaggtgccaatggaggctgacgagacagaagttgtttctatggacgtcgaggaagtgcc 787 || |||||||||||| |||| ||||||||||| | |||||||||||| |||||| || Sbjct: 30415 cgaagtgccaatggagtctgatgagacagaagtcgattctatggacgttgaggaatctcc 30356 Query: 788 tcaagcaactaccgggggaatcgacggtgagaaccttcaccagtggcaacaacactgtat 847 |||||| | || | |||||| || || | |||||||||||||||||||||||| || Sbjct: 30355 ggaagcaaatgtcgcagcaatcgatggcgaaagccttcaccagtggcaacaacactgcat 30296 Query: 848 gaccccaccgtcactgccaaacccgtcagcccatgttatgtggtcaaggtgac 900 ||||||| |||| || |||||||| ||||| | |||||||||||||||||||| Sbjct: 30295 gaccccatcgtcgctaccaaacccttcagcacctgttatgtggtcaaggtgac 30243 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 111 bits (56), Expect = 6e-21 Identities = 246/310 (79%), Gaps = 7/310 (2%) Strand = Plus / Minus Query: 598 ggaattatcatgggctggaggacaattcccctgagcgcagcaattgcttggctctagttc 657 |||| ||||| |||||||||||||| || |||| | ||||||| | ||||||| ||| || Sbjct: 36797269 ggaactatcacgggctggaggacaaatctcctgggtgcagcaacttcttggctttagctc 36797210 Query: 658 cttgggtgccaccacagatcgctatgacatctaattggtctgctactcaaccagaaaaca 717 ||||| |||||||| || || | | |||||||||||||| || | | ||||||| | Sbjct: 36797209 cttggacaccaccacaaattgccacggcatctaattggtcttcttcagattcagaaaaga 36797150 Query: 718 cagaaactcttgaggtgccaatggaggctgacgagacagaagttgtttctatggacgtcg 777 |||| |||| |||||||||||| || | ||||||||||| | |||||||||||| | Sbjct: 36797149 gagaattctttgaagtgccaatggagtctaatgagacagaagtcgattctatggacgttg 36797090 Query: 778 aggaagtgcctcaagcaactaccgggggaatcgacggtgagaaccttcaccagtgg---- 833 ||||| ||| |||||| | ||| | |||||| ||||| | ||||||||||||| Sbjct: 36797089 aggaatctcctgaagcaaatgccgcagcaatcgatggtgaaagccttcaccagtgggcag 36797030 Query: 834 ---caacaacactgtatgaccccaccgtcactgccaaacccgtcagcccatgttatgtgg 890 ||||||||||| ||||||||| |||| || |||||||| ||||| | ||||||||| Sbjct: 36797029 tggcaacaacactgcatgaccccatcgtcgctaccaaacccttcagcacctgttatgtgt 36796970 Query: 891 tcaaggtgac 900 |||||||||| Sbjct: 36796969 tcaaggtgac 36796960