BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst039a14 (1243 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001048597.1| Oryza sativa (japonica cultivar-group) Os01g... 272 3e-69 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 272 3e-69 dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic D... 272 3e-69 dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic D... 272 3e-69 ref|NM_001048592.1| Oryza sativa (japonica cultivar-group) Os01g... 252 3e-63 >ref|NM_001048597.1| Oryza sativa (japonica cultivar-group) Os01g0154900 (Os01g0154900) mRNA, complete cds Length = 945 Score = 272 bits (137), Expect = 3e-69 Identities = 289/339 (85%), Gaps = 3/339 (0%) Strand = Plus / Plus Query: 288 gtaagctccctgtgctcgtgtacttccatggtggtggttactgcatcggctccttcgaac 347 |||||||||| |||||||| |||||||| || ||||| |||||||| ||| || | || | Sbjct: 212 gtaagctccccgtgctcgtctacttccacggcggtggctactgcataggcgccctggacc 271 Query: 348 agcccttc---cactcctgctgcctccgcctcgcctccgagctccccgccgtcgtgctct 404 || || || ||| || |||||||||| ||||| ||||||||||||||||||||||| Sbjct: 272 agtccatctgccacggcttctgcctccgcgccgcctacgagctccccgccgtcgtgctct 331 Query: 405 ccgtccaataccgcctcgcccccgagcaccgcctccctgcggccatcgaggacggtgcgg 464 ||||||| |||||||||||||| |||||||| ||||| ||||||||||| ||||| || | Sbjct: 332 ccgtccagtaccgcctcgccccggagcaccgtctcccggcggccatcgacgacggcgcag 391 Query: 465 ctttcttatcctggttgcgtggccaggccgtacccggcgctggcgccgatccatggttcg 524 ||||| | |||||| |||| |||||||||| | |||||| ||||||||||| ||| ||| Sbjct: 392 ctttcatctcctggctgcgcggccaggccgcgctcggcgccggcgccgatccgtggctcg 451 Query: 525 cggaatcggccaacttcacccggacgttcatctccggcgtctcggccggcgccaatttgg 584 |||| |||||| ||||| | |||||||||||||||||| | |||||||||||||| |||| Sbjct: 452 cggagtcggccgacttcgcgcggacgttcatctccggcttgtcggccggcgccaacttgg 511 Query: 585 cccaccacgtcacggttcaggttgcctcggggcaactcg 623 ||||||||||||||| || || ||||||||||| |||| Sbjct: 512 cccaccacgtcacggctcgcgtcgcctcggggcagctcg 550 Score = 216 bits (109), Expect = 2e-52 Identities = 249/295 (84%), Gaps = 3/295 (1%) Strand = Plus / Plus Query: 683 gagcgcacggcgacggaggcggatcccccggccgacgtgtcc---cttacagtcgagaag 739 |||||||||||| ||||||| | || ||||||||||| ||| || || ||||||| | Sbjct: 613 gagcgcacggcggcggaggccaacccgccggccgacgtctccacgctgaccgtcgagatg 672 Query: 740 tcggaccagtgctggcgcatgtcgctgccagtgggggctaccagggaccacccggtggcc 799 | |||||| ||||| |||||| |||| ||||| || |||||||||||||||||||| Sbjct: 673 gccgaccagatgtggcgtatgtcgttgccggtgggcgcgaccagggaccacccggtggcg 732 Query: 800 aacccgttcggcccggagagccccagcctggagcaggtggcgctcccgccggtgctcgtt 859 ||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||| Sbjct: 733 aacccgttcggcccggagagccccagcctggaggcggtggcgctcccggcggcgctcgtc 792 Query: 860 gtggcgcccgagagtgatgtgctccgtgaccacgtgttgggctacgcggcgaggctgacg 919 |||||| ||| | || |||||| |||| |||| ||| ||||||||||||| ||| | Sbjct: 793 gtggcgtccggcggcgacgtgctctacgaccgcgtggtggactacgcggcgaggttgaag 852 Query: 920 gagatgggcaaggccgtcgagctcgccgagttcaagggagagcagcatggcttct 974 |||||||||||||| || ||||||||||||||| |||||||||||| |||||||| Sbjct: 853 gagatgggcaaggcggtggagctcgccgagttcgagggagagcagcttggcttct 907 Score = 101 bits (51), Expect = 7e-18 Identities = 66/71 (92%) Strand = Plus / Plus Query: 92 ccgcacgtcgtggaggacttcctcggcatcctccagctcctcagcgacggctccgtcgtc 151 ||||||||||||||||||||| |||| || || |||||||||||||||||||||||||| Sbjct: 28 ccgcacgtcgtggaggacttctacggcgtcgtcaagctcctcagcgacggctccgtcgtc 87 Query: 152 cgcggcgacga 162 ||||||||||| Sbjct: 88 cgcggcgacga 98 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 272 bits (137), Expect = 3e-69 Identities = 289/339 (85%), Gaps = 3/339 (0%) Strand = Plus / Minus Query: 288 gtaagctccctgtgctcgtgtacttccatggtggtggttactgcatcggctccttcgaac 347 |||||||||| |||||||| |||||||| || ||||| |||||||| ||| || | || | Sbjct: 2954247 gtaagctccccgtgctcgtctacttccacggcggtggctactgcataggcgccctggacc 2954188 Query: 348 agcccttc---cactcctgctgcctccgcctcgcctccgagctccccgccgtcgtgctct 404 || || || ||| || |||||||||| ||||| ||||||||||||||||||||||| Sbjct: 2954187 agtccatctgccacggcttctgcctccgcgccgcctacgagctccccgccgtcgtgctct 2954128 Query: 405 ccgtccaataccgcctcgcccccgagcaccgcctccctgcggccatcgaggacggtgcgg 464 ||||||| |||||||||||||| |||||||| ||||| ||||||||||| ||||| || | Sbjct: 2954127 ccgtccagtaccgcctcgccccggagcaccgtctcccggcggccatcgacgacggcgcag 2954068 Query: 465 ctttcttatcctggttgcgtggccaggccgtacccggcgctggcgccgatccatggttcg 524 ||||| | |||||| |||| |||||||||| | |||||| ||||||||||| ||| ||| Sbjct: 2954067 ctttcatctcctggctgcgcggccaggccgcgctcggcgccggcgccgatccgtggctcg 2954008 Query: 525 cggaatcggccaacttcacccggacgttcatctccggcgtctcggccggcgccaatttgg 584 |||| |||||| ||||| | |||||||||||||||||| | |||||||||||||| |||| Sbjct: 2954007 cggagtcggccgacttcgcgcggacgttcatctccggcttgtcggccggcgccaacttgg 2953948 Query: 585 cccaccacgtcacggttcaggttgcctcggggcaactcg 623 ||||||||||||||| || || ||||||||||| |||| Sbjct: 2953947 cccaccacgtcacggctcgcgtcgcctcggggcagctcg 2953909 Score = 252 bits (127), Expect = 3e-63 Identities = 267/313 (85%), Gaps = 3/313 (0%) Strand = Plus / Plus Query: 665 gcgttcttcggtggagtcgagcgcacggcgacggaggcggatcccccggccgacgtgtcc 724 ||||||||||| || || |||||||||||| ||||||| | || ||||||||||||||| Sbjct: 2896540 gcgttcttcggcggggtggagcgcacggcggcggaggccaacccaccggccgacgtgtcc 2896599 Query: 725 ctt---acagtcgagaagtcggaccagtgctggcgcatgtcgctgccagtgggggctacc 781 || || ||||||| | | ||||||| ||||||| || ||||||| | |||||| ||| Sbjct: 2896600 ctgctgaccgtcgagatggccgaccagttctggcgcctggcgctgccggcgggggcgacc 2896659 Query: 782 agggaccacccggtggccaacccgttcggcccggagagccccagcctggagcaggtggcg 841 ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2896660 agggaccacccggtggcgaacccgttcggcccggagagccccagcctggaggcggtggcg 2896719 Query: 842 ctcccgccggtgctcgttgtggcgcccgagagtgatgtgctccgtgaccacgtgttgggc 901 || ||||||| |||||| |||||| ||| | || |||||| |||| |||| ||||| Sbjct: 2896720 ctgccgccggcgctcgtcgtggcgtccggcggcgacgtgctctacgaccgcgtggtgggc 2896779 Query: 902 tacgcggcgaggctgacggagatgggcaaggccgtcgagctcgccgagttcaagggagag 961 |||||||||||| ||| ||||||||||||||| || ||||||| ||||||| |||||| | Sbjct: 2896780 tacgcggcgaggttgaaggagatgggcaaggcggtggagctcgtcgagttcgagggagcg 2896839 Query: 962 cagcatggcttct 974 ||||||||||||| Sbjct: 2896840 cagcatggcttct 2896852 Score = 216 bits (109), Expect = 2e-52 Identities = 249/295 (84%), Gaps = 3/295 (1%) Strand = Plus / Minus Query: 683 gagcgcacggcgacggaggcggatcccccggccgacgtgtcc---cttacagtcgagaag 739 |||||||||||| ||||||| | || ||||||||||| ||| || || ||||||| | Sbjct: 2953846 gagcgcacggcggcggaggccaacccgccggccgacgtctccacgctgaccgtcgagatg 2953787 Query: 740 tcggaccagtgctggcgcatgtcgctgccagtgggggctaccagggaccacccggtggcc 799 | |||||| ||||| |||||| |||| ||||| || |||||||||||||||||||| Sbjct: 2953786 gccgaccagatgtggcgtatgtcgttgccggtgggcgcgaccagggaccacccggtggcg 2953727 Query: 800 aacccgttcggcccggagagccccagcctggagcaggtggcgctcccgccggtgctcgtt 859 ||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||| Sbjct: 2953726 aacccgttcggcccggagagccccagcctggaggcggtggcgctcccggcggcgctcgtc 2953667 Query: 860 gtggcgcccgagagtgatgtgctccgtgaccacgtgttgggctacgcggcgaggctgacg 919 |||||| ||| | || |||||| |||| |||| ||| ||||||||||||| ||| | Sbjct: 2953666 gtggcgtccggcggcgacgtgctctacgaccgcgtggtggactacgcggcgaggttgaag 2953607 Query: 920 gagatgggcaaggccgtcgagctcgccgagttcaagggagagcagcatggcttct 974 |||||||||||||| || ||||||||||||||| |||||||||||| |||||||| Sbjct: 2953606 gagatgggcaaggcggtggagctcgccgagttcgagggagagcagcttggcttct 2953552 Score = 168 bits (85), Expect = 3e-38 Identities = 171/199 (85%), Gaps = 3/199 (1%) Strand = Plus / Plus Query: 288 gtaagctccctgtgctcgtgtacttccatggtggtggttactgcatcggctccttcgaac 347 |||||||||| |||||||| |||||||| || ||||| |||||||||||| || |||| | Sbjct: 2896157 gtaagctccccgtgctcgtctacttccacggcggtggctactgcatcggcgccctcgacc 2896216 Query: 348 ag---cccttccactcctgctgcctccgcctcgcctccgagctccccgccgtcgtgctct 404 || ||||||||| ||| |||||||||| |||| ||||||||||||||||||||||| Sbjct: 2896217 agtcccccttccacaccttctgcctccgcgccgccgacgagctccccgccgtcgtgctct 2896276 Query: 405 ccgtccaataccgcctcgcccccgagcaccgcctccctgcggccatcgaggacggtgcgg 464 ||||||| |||||||||||||| || ||||| ||||| |||||||||| ||||| || | Sbjct: 2896277 ccgtccagtaccgcctcgccccggaacaccgtctccccacggccatcgacgacggcgcag 2896336 Query: 465 ctttcttatcctggttgcg 483 ||||||| |||||| |||| Sbjct: 2896337 ctttcttctcctggctgcg 2896355 Score = 143 bits (72), Expect = 2e-30 Identities = 186/224 (83%) Strand = Plus / Minus Query: 352 cttccactcctgctgcctccgcctcgcctccgagctccccgccgtcgtgctctccgtcca 411 |||||||| |||||||| |||||||| || ||||||| ||||||||||||||||| | | Sbjct: 2957110 cttccactgctgctgccaacgcctcgcgtcggagctccgcgccgtcgtgctctccgccga 2957051 Query: 412 ataccgcctcgcccccgagcaccgcctccctgcggccatcgaggacggtgcggctttctt 471 |||||||||| |||||||||||||||||| || |||||||| ||||| |||||| |||| Sbjct: 2957050 ctaccgcctcggccccgagcaccgcctccccgccgccatcgacgacggcgcggctgtctt 2956991 Query: 472 atcctggttgcgtggccaggccgtacccggcgctggcgccgatccatggttcgcggaatc 531 || ||| |||||| ||||||| | |||| | ||||||||| | ||| |||| ||||| Sbjct: 2956990 gtcatggctgcgtgaccaggccatgtccggaccgggcgccgattcctggctcgccgaatc 2956931 Query: 532 ggccaacttcacccggacgttcatctccggcgtctcggccggcg 575 |||| ||||| |||| |||| || |||||| |||||||||| Sbjct: 2956930 ggccgacttcgcccgcgtgttcgtcgccggcgagtcggccggcg 2956887 Score = 105 bits (53), Expect = 4e-19 Identities = 92/105 (87%) Strand = Plus / Minus Query: 759 tgtcgctgccagtgggggctaccagggaccacccggtggccaacccgttcggcccggaga 818 |||||||||| | |||||| || ||||||||||||||||| ||||||||||| ||||| | Sbjct: 2956703 tgtcgctgccggagggggcgacgagggaccacccggtggcgaacccgttcggaccggaca 2956644 Query: 819 gccccagcctggagcaggtggcgctcccgccggtgctcgttgtgg 863 |||||||||| | | ||||||| |||||||||||||||| |||| Sbjct: 2956643 gccccagcctagcggcggtggcgttcccgccggtgctcgtcgtgg 2956599 Score = 101 bits (51), Expect = 7e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 92 ccgcacgtcgtggaggacttcctcggcatcctccagctcctcagcgacggctccgtcgtc 151 ||||||||||||||||||||| |||| || || |||||||||||||||||||||||||| Sbjct: 2954477 ccgcacgtcgtggaggacttctacggcgtcgtcaagctcctcagcgacggctccgtcgtc 2954418 Query: 152 cgcggcgacga 162 ||||||||||| Sbjct: 2954417 cgcggcgacga 2954407 Score = 95.6 bits (48), Expect = 4e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 95 cacgtcgtggaggacttcctcggcatcctccagctcctcagcgacggctccgtcgtccgc 154 |||||||||||||||||| ||||| || |||||||||||||||||||||||||||| ||| Sbjct: 2895955 cacgtcgtggaggacttcttcggcgtcatccagctcctcagcgacggctccgtcgtgcgc 2896014 Query: 155 ggcgacga 162 | |||||| Sbjct: 2896015 gccgacga 2896022 Score = 95.6 bits (48), Expect = 4e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 193 ggacgtccccggcgttcagtggaaggacgtcgtttacgacgcaacgcacggcctcagggt 252 ||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| Sbjct: 2896053 ggacgtccccggcgttcagtggaaggacgccgtgtacgacgccacgcacggcctcagggt 2896112 Score = 87.7 bits (44), Expect = 1e-13 Identities = 74/84 (88%) Strand = Plus / Plus Query: 512 gatccatggttcgcggaatcggccaacttcacccggacgttcatctccggcgtctcggcc 571 ||||||||| ||||||| |||||| | || | |||||||||||||||||||| |||||| Sbjct: 2896372 gatccatggctcgcggagtcggccgaactcgcgcggacgttcatctccggcgtgtcggcc 2896431 Query: 572 ggcgccaatttggcccaccacgtc 595 |||||||| |||||||||||||| Sbjct: 2896432 ggcgccaacctggcccaccacgtc 2896455 Score = 87.7 bits (44), Expect = 1e-13 Identities = 62/68 (91%) Strand = Plus / Minus Query: 202 cggcgttcagtggaaggacgtcgtttacgacgcaacgcacggcctcagggttcgcatgta 261 ||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||| |||| Sbjct: 2954351 cggcgttcagtggaaagacgtcgtgtacgacgcgacgcacggcctcagggtccgcgtgta 2954292 Query: 262 caggtcgc 269 || ||||| Sbjct: 2954291 cacgtcgc 2954284 >dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0011G08 Length = 139490 Score = 272 bits (137), Expect = 3e-69 Identities = 289/339 (85%), Gaps = 3/339 (0%) Strand = Plus / Minus Query: 288 gtaagctccctgtgctcgtgtacttccatggtggtggttactgcatcggctccttcgaac 347 |||||||||| |||||||| |||||||| || ||||| |||||||| ||| || | || | Sbjct: 35764 gtaagctccccgtgctcgtctacttccacggcggtggctactgcataggcgccctggacc 35705 Query: 348 agcccttc---cactcctgctgcctccgcctcgcctccgagctccccgccgtcgtgctct 404 || || || ||| || |||||||||| ||||| ||||||||||||||||||||||| Sbjct: 35704 agtccatctgccacggcttctgcctccgcgccgcctacgagctccccgccgtcgtgctct 35645 Query: 405 ccgtccaataccgcctcgcccccgagcaccgcctccctgcggccatcgaggacggtgcgg 464 ||||||| |||||||||||||| |||||||| ||||| ||||||||||| ||||| || | Sbjct: 35644 ccgtccagtaccgcctcgccccggagcaccgtctcccggcggccatcgacgacggcgcag 35585 Query: 465 ctttcttatcctggttgcgtggccaggccgtacccggcgctggcgccgatccatggttcg 524 ||||| | |||||| |||| |||||||||| | |||||| ||||||||||| ||| ||| Sbjct: 35584 ctttcatctcctggctgcgcggccaggccgcgctcggcgccggcgccgatccgtggctcg 35525 Query: 525 cggaatcggccaacttcacccggacgttcatctccggcgtctcggccggcgccaatttgg 584 |||| |||||| ||||| | |||||||||||||||||| | |||||||||||||| |||| Sbjct: 35524 cggagtcggccgacttcgcgcggacgttcatctccggcttgtcggccggcgccaacttgg 35465 Query: 585 cccaccacgtcacggttcaggttgcctcggggcaactcg 623 ||||||||||||||| || || ||||||||||| |||| Sbjct: 35464 cccaccacgtcacggctcgcgtcgcctcggggcagctcg 35426 Score = 216 bits (109), Expect = 2e-52 Identities = 249/295 (84%), Gaps = 3/295 (1%) Strand = Plus / Minus Query: 683 gagcgcacggcgacggaggcggatcccccggccgacgtgtcc---cttacagtcgagaag 739 |||||||||||| ||||||| | || ||||||||||| ||| || || ||||||| | Sbjct: 35363 gagcgcacggcggcggaggccaacccgccggccgacgtctccacgctgaccgtcgagatg 35304 Query: 740 tcggaccagtgctggcgcatgtcgctgccagtgggggctaccagggaccacccggtggcc 799 | |||||| ||||| |||||| |||| ||||| || |||||||||||||||||||| Sbjct: 35303 gccgaccagatgtggcgtatgtcgttgccggtgggcgcgaccagggaccacccggtggcg 35244 Query: 800 aacccgttcggcccggagagccccagcctggagcaggtggcgctcccgccggtgctcgtt 859 ||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||| Sbjct: 35243 aacccgttcggcccggagagccccagcctggaggcggtggcgctcccggcggcgctcgtc 35184 Query: 860 gtggcgcccgagagtgatgtgctccgtgaccacgtgttgggctacgcggcgaggctgacg 919 |||||| ||| | || |||||| |||| |||| ||| ||||||||||||| ||| | Sbjct: 35183 gtggcgtccggcggcgacgtgctctacgaccgcgtggtggactacgcggcgaggttgaag 35124 Query: 920 gagatgggcaaggccgtcgagctcgccgagttcaagggagagcagcatggcttct 974 |||||||||||||| || ||||||||||||||| |||||||||||| |||||||| Sbjct: 35123 gagatgggcaaggcggtggagctcgccgagttcgagggagagcagcttggcttct 35069 Score = 143 bits (72), Expect = 2e-30 Identities = 186/224 (83%) Strand = Plus / Minus Query: 352 cttccactcctgctgcctccgcctcgcctccgagctccccgccgtcgtgctctccgtcca 411 |||||||| |||||||| |||||||| || ||||||| ||||||||||||||||| | | Sbjct: 38627 cttccactgctgctgccaacgcctcgcgtcggagctccgcgccgtcgtgctctccgccga 38568 Query: 412 ataccgcctcgcccccgagcaccgcctccctgcggccatcgaggacggtgcggctttctt 471 |||||||||| |||||||||||||||||| || |||||||| ||||| |||||| |||| Sbjct: 38567 ctaccgcctcggccccgagcaccgcctccccgccgccatcgacgacggcgcggctgtctt 38508 Query: 472 atcctggttgcgtggccaggccgtacccggcgctggcgccgatccatggttcgcggaatc 531 || ||| |||||| ||||||| | |||| | ||||||||| | ||| |||| ||||| Sbjct: 38507 gtcatggctgcgtgaccaggccatgtccggaccgggcgccgattcctggctcgccgaatc 38448 Query: 532 ggccaacttcacccggacgttcatctccggcgtctcggccggcg 575 |||| ||||| |||| |||| || |||||| |||||||||| Sbjct: 38447 ggccgacttcgcccgcgtgttcgtcgccggcgagtcggccggcg 38404 Score = 105 bits (53), Expect = 4e-19 Identities = 92/105 (87%) Strand = Plus / Minus Query: 759 tgtcgctgccagtgggggctaccagggaccacccggtggccaacccgttcggcccggaga 818 |||||||||| | |||||| || ||||||||||||||||| ||||||||||| ||||| | Sbjct: 38220 tgtcgctgccggagggggcgacgagggaccacccggtggcgaacccgttcggaccggaca 38161 Query: 819 gccccagcctggagcaggtggcgctcccgccggtgctcgttgtgg 863 |||||||||| | | ||||||| |||||||||||||||| |||| Sbjct: 38160 gccccagcctagcggcggtggcgttcccgccggtgctcgtcgtgg 38116 Score = 101 bits (51), Expect = 7e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 92 ccgcacgtcgtggaggacttcctcggcatcctccagctcctcagcgacggctccgtcgtc 151 ||||||||||||||||||||| |||| || || |||||||||||||||||||||||||| Sbjct: 35994 ccgcacgtcgtggaggacttctacggcgtcgtcaagctcctcagcgacggctccgtcgtc 35935 Query: 152 cgcggcgacga 162 ||||||||||| Sbjct: 35934 cgcggcgacga 35924 Score = 87.7 bits (44), Expect = 1e-13 Identities = 62/68 (91%) Strand = Plus / Minus Query: 202 cggcgttcagtggaaggacgtcgtttacgacgcaacgcacggcctcagggttcgcatgta 261 ||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||| |||| Sbjct: 35868 cggcgttcagtggaaagacgtcgtgtacgacgcgacgcacggcctcagggtccgcgtgta 35809 Query: 262 caggtcgc 269 || ||||| Sbjct: 35808 cacgtcgc 35801 >dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0030H07 Length = 168253 Score = 272 bits (137), Expect = 3e-69 Identities = 289/339 (85%), Gaps = 3/339 (0%) Strand = Plus / Minus Query: 288 gtaagctccctgtgctcgtgtacttccatggtggtggttactgcatcggctccttcgaac 347 |||||||||| |||||||| |||||||| || ||||| |||||||| ||| || | || | Sbjct: 161245 gtaagctccccgtgctcgtctacttccacggcggtggctactgcataggcgccctggacc 161186 Query: 348 agcccttc---cactcctgctgcctccgcctcgcctccgagctccccgccgtcgtgctct 404 || || || ||| || |||||||||| ||||| ||||||||||||||||||||||| Sbjct: 161185 agtccatctgccacggcttctgcctccgcgccgcctacgagctccccgccgtcgtgctct 161126 Query: 405 ccgtccaataccgcctcgcccccgagcaccgcctccctgcggccatcgaggacggtgcgg 464 ||||||| |||||||||||||| |||||||| ||||| ||||||||||| ||||| || | Sbjct: 161125 ccgtccagtaccgcctcgccccggagcaccgtctcccggcggccatcgacgacggcgcag 161066 Query: 465 ctttcttatcctggttgcgtggccaggccgtacccggcgctggcgccgatccatggttcg 524 ||||| | |||||| |||| |||||||||| | |||||| ||||||||||| ||| ||| Sbjct: 161065 ctttcatctcctggctgcgcggccaggccgcgctcggcgccggcgccgatccgtggctcg 161006 Query: 525 cggaatcggccaacttcacccggacgttcatctccggcgtctcggccggcgccaatttgg 584 |||| |||||| ||||| | |||||||||||||||||| | |||||||||||||| |||| Sbjct: 161005 cggagtcggccgacttcgcgcggacgttcatctccggcttgtcggccggcgccaacttgg 160946 Query: 585 cccaccacgtcacggttcaggttgcctcggggcaactcg 623 ||||||||||||||| || || ||||||||||| |||| Sbjct: 160945 cccaccacgtcacggctcgcgtcgcctcggggcagctcg 160907 Score = 252 bits (127), Expect = 3e-63 Identities = 267/313 (85%), Gaps = 3/313 (0%) Strand = Plus / Plus Query: 665 gcgttcttcggtggagtcgagcgcacggcgacggaggcggatcccccggccgacgtgtcc 724 ||||||||||| || || |||||||||||| ||||||| | || ||||||||||||||| Sbjct: 103538 gcgttcttcggcggggtggagcgcacggcggcggaggccaacccaccggccgacgtgtcc 103597 Query: 725 ctt---acagtcgagaagtcggaccagtgctggcgcatgtcgctgccagtgggggctacc 781 || || ||||||| | | ||||||| ||||||| || ||||||| | |||||| ||| Sbjct: 103598 ctgctgaccgtcgagatggccgaccagttctggcgcctggcgctgccggcgggggcgacc 103657 Query: 782 agggaccacccggtggccaacccgttcggcccggagagccccagcctggagcaggtggcg 841 ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 103658 agggaccacccggtggcgaacccgttcggcccggagagccccagcctggaggcggtggcg 103717 Query: 842 ctcccgccggtgctcgttgtggcgcccgagagtgatgtgctccgtgaccacgtgttgggc 901 || ||||||| |||||| |||||| ||| | || |||||| |||| |||| ||||| Sbjct: 103718 ctgccgccggcgctcgtcgtggcgtccggcggcgacgtgctctacgaccgcgtggtgggc 103777 Query: 902 tacgcggcgaggctgacggagatgggcaaggccgtcgagctcgccgagttcaagggagag 961 |||||||||||| ||| ||||||||||||||| || ||||||| ||||||| |||||| | Sbjct: 103778 tacgcggcgaggttgaaggagatgggcaaggcggtggagctcgtcgagttcgagggagcg 103837 Query: 962 cagcatggcttct 974 ||||||||||||| Sbjct: 103838 cagcatggcttct 103850 Score = 216 bits (109), Expect = 2e-52 Identities = 249/295 (84%), Gaps = 3/295 (1%) Strand = Plus / Minus Query: 683 gagcgcacggcgacggaggcggatcccccggccgacgtgtcc---cttacagtcgagaag 739 |||||||||||| ||||||| | || ||||||||||| ||| || || ||||||| | Sbjct: 160844 gagcgcacggcggcggaggccaacccgccggccgacgtctccacgctgaccgtcgagatg 160785 Query: 740 tcggaccagtgctggcgcatgtcgctgccagtgggggctaccagggaccacccggtggcc 799 | |||||| ||||| |||||| |||| ||||| || |||||||||||||||||||| Sbjct: 160784 gccgaccagatgtggcgtatgtcgttgccggtgggcgcgaccagggaccacccggtggcg 160725 Query: 800 aacccgttcggcccggagagccccagcctggagcaggtggcgctcccgccggtgctcgtt 859 ||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||| Sbjct: 160724 aacccgttcggcccggagagccccagcctggaggcggtggcgctcccggcggcgctcgtc 160665 Query: 860 gtggcgcccgagagtgatgtgctccgtgaccacgtgttgggctacgcggcgaggctgacg 919 |||||| ||| | || |||||| |||| |||| ||| ||||||||||||| ||| | Sbjct: 160664 gtggcgtccggcggcgacgtgctctacgaccgcgtggtggactacgcggcgaggttgaag 160605 Query: 920 gagatgggcaaggccgtcgagctcgccgagttcaagggagagcagcatggcttct 974 |||||||||||||| || ||||||||||||||| |||||||||||| |||||||| Sbjct: 160604 gagatgggcaaggcggtggagctcgccgagttcgagggagagcagcttggcttct 160550 Score = 168 bits (85), Expect = 3e-38 Identities = 171/199 (85%), Gaps = 3/199 (1%) Strand = Plus / Plus Query: 288 gtaagctccctgtgctcgtgtacttccatggtggtggttactgcatcggctccttcgaac 347 |||||||||| |||||||| |||||||| || ||||| |||||||||||| || |||| | Sbjct: 103155 gtaagctccccgtgctcgtctacttccacggcggtggctactgcatcggcgccctcgacc 103214 Query: 348 ag---cccttccactcctgctgcctccgcctcgcctccgagctccccgccgtcgtgctct 404 || ||||||||| ||| |||||||||| |||| ||||||||||||||||||||||| Sbjct: 103215 agtcccccttccacaccttctgcctccgcgccgccgacgagctccccgccgtcgtgctct 103274 Query: 405 ccgtccaataccgcctcgcccccgagcaccgcctccctgcggccatcgaggacggtgcgg 464 ||||||| |||||||||||||| || ||||| ||||| |||||||||| ||||| || | Sbjct: 103275 ccgtccagtaccgcctcgccccggaacaccgtctccccacggccatcgacgacggcgcag 103334 Query: 465 ctttcttatcctggttgcg 483 ||||||| |||||| |||| Sbjct: 103335 ctttcttctcctggctgcg 103353 Score = 143 bits (72), Expect = 2e-30 Identities = 186/224 (83%) Strand = Plus / Minus Query: 352 cttccactcctgctgcctccgcctcgcctccgagctccccgccgtcgtgctctccgtcca 411 |||||||| |||||||| |||||||| || ||||||| ||||||||||||||||| | | Sbjct: 164108 cttccactgctgctgccaacgcctcgcgtcggagctccgcgccgtcgtgctctccgccga 164049 Query: 412 ataccgcctcgcccccgagcaccgcctccctgcggccatcgaggacggtgcggctttctt 471 |||||||||| |||||||||||||||||| || |||||||| ||||| |||||| |||| Sbjct: 164048 ctaccgcctcggccccgagcaccgcctccccgccgccatcgacgacggcgcggctgtctt 163989 Query: 472 atcctggttgcgtggccaggccgtacccggcgctggcgccgatccatggttcgcggaatc 531 || ||| |||||| ||||||| | |||| | ||||||||| | ||| |||| ||||| Sbjct: 163988 gtcatggctgcgtgaccaggccatgtccggaccgggcgccgattcctggctcgccgaatc 163929 Query: 532 ggccaacttcacccggacgttcatctccggcgtctcggccggcg 575 |||| ||||| |||| |||| || |||||| |||||||||| Sbjct: 163928 ggccgacttcgcccgcgtgttcgtcgccggcgagtcggccggcg 163885 Score = 105 bits (53), Expect = 4e-19 Identities = 92/105 (87%) Strand = Plus / Minus Query: 759 tgtcgctgccagtgggggctaccagggaccacccggtggccaacccgttcggcccggaga 818 |||||||||| | |||||| || ||||||||||||||||| ||||||||||| ||||| | Sbjct: 163701 tgtcgctgccggagggggcgacgagggaccacccggtggcgaacccgttcggaccggaca 163642 Query: 819 gccccagcctggagcaggtggcgctcccgccggtgctcgttgtgg 863 |||||||||| | | ||||||| |||||||||||||||| |||| Sbjct: 163641 gccccagcctagcggcggtggcgttcccgccggtgctcgtcgtgg 163597 Score = 101 bits (51), Expect = 7e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 92 ccgcacgtcgtggaggacttcctcggcatcctccagctcctcagcgacggctccgtcgtc 151 ||||||||||||||||||||| |||| || || |||||||||||||||||||||||||| Sbjct: 161475 ccgcacgtcgtggaggacttctacggcgtcgtcaagctcctcagcgacggctccgtcgtc 161416 Query: 152 cgcggcgacga 162 ||||||||||| Sbjct: 161415 cgcggcgacga 161405 Score = 95.6 bits (48), Expect = 4e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 95 cacgtcgtggaggacttcctcggcatcctccagctcctcagcgacggctccgtcgtccgc 154 |||||||||||||||||| ||||| || |||||||||||||||||||||||||||| ||| Sbjct: 102953 cacgtcgtggaggacttcttcggcgtcatccagctcctcagcgacggctccgtcgtgcgc 103012 Query: 155 ggcgacga 162 | |||||| Sbjct: 103013 gccgacga 103020 Score = 95.6 bits (48), Expect = 4e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 193 ggacgtccccggcgttcagtggaaggacgtcgtttacgacgcaacgcacggcctcagggt 252 ||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| Sbjct: 103051 ggacgtccccggcgttcagtggaaggacgccgtgtacgacgccacgcacggcctcagggt 103110 Score = 87.7 bits (44), Expect = 1e-13 Identities = 74/84 (88%) Strand = Plus / Plus Query: 512 gatccatggttcgcggaatcggccaacttcacccggacgttcatctccggcgtctcggcc 571 ||||||||| ||||||| |||||| | || | |||||||||||||||||||| |||||| Sbjct: 103370 gatccatggctcgcggagtcggccgaactcgcgcggacgttcatctccggcgtgtcggcc 103429 Query: 572 ggcgccaatttggcccaccacgtc 595 |||||||| |||||||||||||| Sbjct: 103430 ggcgccaacctggcccaccacgtc 103453 Score = 87.7 bits (44), Expect = 1e-13 Identities = 62/68 (91%) Strand = Plus / Minus Query: 202 cggcgttcagtggaaggacgtcgtttacgacgcaacgcacggcctcagggttcgcatgta 261 ||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||| |||| Sbjct: 161349 cggcgttcagtggaaagacgtcgtgtacgacgcgacgcacggcctcagggtccgcgtgta 161290 Query: 262 caggtcgc 269 || ||||| Sbjct: 161289 cacgtcgc 161282 >ref|NM_001048592.1| Oryza sativa (japonica cultivar-group) Os01g0153800 (Os01g0153800) mRNA, complete cds Length = 1086 Score = 252 bits (127), Expect = 3e-63 Identities = 267/313 (85%), Gaps = 3/313 (0%) Strand = Plus / Plus Query: 665 gcgttcttcggtggagtcgagcgcacggcgacggaggcggatcccccggccgacgtgtcc 724 ||||||||||| || || |||||||||||| ||||||| | || ||||||||||||||| Sbjct: 682 gcgttcttcggcggggtggagcgcacggcggcggaggccaacccaccggccgacgtgtcc 741 Query: 725 ctt---acagtcgagaagtcggaccagtgctggcgcatgtcgctgccagtgggggctacc 781 || || ||||||| | | ||||||| ||||||| || ||||||| | |||||| ||| Sbjct: 742 ctgctgaccgtcgagatggccgaccagttctggcgcctggcgctgccggcgggggcgacc 801 Query: 782 agggaccacccggtggccaacccgttcggcccggagagccccagcctggagcaggtggcg 841 ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 802 agggaccacccggtggcgaacccgttcggcccggagagccccagcctggaggcggtggcg 861 Query: 842 ctcccgccggtgctcgttgtggcgcccgagagtgatgtgctccgtgaccacgtgttgggc 901 || ||||||| |||||| |||||| ||| | || |||||| |||| |||| ||||| Sbjct: 862 ctgccgccggcgctcgtcgtggcgtccggcggcgacgtgctctacgaccgcgtggtgggc 921 Query: 902 tacgcggcgaggctgacggagatgggcaaggccgtcgagctcgccgagttcaagggagag 961 |||||||||||| ||| ||||||||||||||| || ||||||| ||||||| |||||| | Sbjct: 922 tacgcggcgaggttgaaggagatgggcaaggcggtggagctcgtcgagttcgagggagcg 981 Query: 962 cagcatggcttct 974 ||||||||||||| Sbjct: 982 cagcatggcttct 994 Score = 168 bits (85), Expect = 3e-38 Identities = 171/199 (85%), Gaps = 3/199 (1%) Strand = Plus / Plus Query: 288 gtaagctccctgtgctcgtgtacttccatggtggtggttactgcatcggctccttcgaac 347 |||||||||| |||||||| |||||||| || ||||| |||||||||||| || |||| | Sbjct: 299 gtaagctccccgtgctcgtctacttccacggcggtggctactgcatcggcgccctcgacc 358 Query: 348 ag---cccttccactcctgctgcctccgcctcgcctccgagctccccgccgtcgtgctct 404 || ||||||||| ||| |||||||||| |||| ||||||||||||||||||||||| Sbjct: 359 agtcccccttccacaccttctgcctccgcgccgccgacgagctccccgccgtcgtgctct 418 Query: 405 ccgtccaataccgcctcgcccccgagcaccgcctccctgcggccatcgaggacggtgcgg 464 ||||||| |||||||||||||| || ||||| ||||| |||||||||| ||||| || | Sbjct: 419 ccgtccagtaccgcctcgccccggaacaccgtctccccacggccatcgacgacggcgcag 478 Query: 465 ctttcttatcctggttgcg 483 ||||||| |||||| |||| Sbjct: 479 ctttcttctcctggctgcg 497 Score = 95.6 bits (48), Expect = 4e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 95 cacgtcgtggaggacttcctcggcatcctccagctcctcagcgacggctccgtcgtccgc 154 |||||||||||||||||| ||||| || |||||||||||||||||||||||||||| ||| Sbjct: 97 cacgtcgtggaggacttcttcggcgtcatccagctcctcagcgacggctccgtcgtgcgc 156 Query: 155 ggcgacga 162 | |||||| Sbjct: 157 gccgacga 164 Score = 95.6 bits (48), Expect = 4e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 193 ggacgtccccggcgttcagtggaaggacgtcgtttacgacgcaacgcacggcctcagggt 252 ||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| Sbjct: 195 ggacgtccccggcgttcagtggaaggacgccgtgtacgacgccacgcacggcctcagggt 254 Score = 87.7 bits (44), Expect = 1e-13 Identities = 74/84 (88%) Strand = Plus / Plus Query: 512 gatccatggttcgcggaatcggccaacttcacccggacgttcatctccggcgtctcggcc 571 ||||||||| ||||||| |||||| | || | |||||||||||||||||||| |||||| Sbjct: 514 gatccatggctcgcggagtcggccgaactcgcgcggacgttcatctccggcgtgtcggcc 573 Query: 572 ggcgccaatttggcccaccacgtc 595 |||||||| |||||||||||||| Sbjct: 574 ggcgccaacctggcccaccacgtc 597