BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst038n08 (1085 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001063414.1| Oryza sativa (japonica cultivar-group) Os06g... 585 e-163 dbj|AK121877.1| Oryza sativa (japonica cultivar-group) cDNA clon... 585 e-163 emb|CT827998.1| Oryza sativa (indica cultivar-group) cDNA clone:... 527 e-146 gb|AY108490.1| Zea mays PCO144884 mRNA sequence 192 2e-45 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 186 1e-43 >ref|NM_001063414.1| Oryza sativa (japonica cultivar-group) Os06g0160400 (Os06g0160400) mRNA, complete cds Length = 1070 Score = 585 bits (295), Expect = e-163 Identities = 473/531 (89%), Gaps = 1/531 (0%) Strand = Plus / Plus Query: 334 tcctccacatcgataggcatacaggttgtgataaagccagaatatcggataacccctcct 393 |||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 354 tcctccacatcgatgggcatacaagttgtgataaagccagcatatcggataacccctcct 413 Query: 394 cctcaattggcaccacagatagtagaagttccccgcagcaccttcaactttgattttgag 453 ||||| ||| | |||||| | |||| |||| ||||| |||||||| |||||||||||| Sbjct: 414 cctcagttgccgccacagcttacagaaattcctcgcagtaccttcaattttgattttgag 473 Query: 454 tatgaaagaaagattcttgctgaggcagagaaggagaaccccaactggagcaagtttgtg 513 |||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 474 tatgaaaggaaaattcttgctgaggctgagaaggagaaccccaactggagcaagtttgtg 533 Query: 514 gtagaaagccagctaccaccacaggcacagccgccaagaggcccaagacacgcagctccc 573 |||| || |||| |||||||| ||||||||||||||||||||| || | || ||||| Sbjct: 534 atagagagtcagccaccaccaccaccacagccgccaagaggcccaaaactcacaactccc 593 Query: 574 actacctctgtggctacaccaggggatccagttgtggacaaatatatcgccatggggctt 633 ||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 594 actacttctgtggctactccaggggatccagttgtggacaagtatatatccatggggctt 653 Query: 634 agacgtgaagctgtctcatttgctgtgttgaattatggagataatccagcgaaggtgaag 693 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 654 ggacgtgaagctgtctcatttgctgtgttgaactatggagataatccagcgaaggtgaag 713 Query: 694 gaatttgtgaaatcctacaatgctctccacgagatgggcttcacgtccccaaacgttccc 753 || ||||||||||||||||| ||||||||||||||||||||||| ||| |||| |||||| Sbjct: 714 gagtttgtgaaatcctacaacgctctccacgagatgggcttcacatcctcaaatgttccc 773 Query: 754 gagttgctggcgatccacgataacgatcctgacaaagttatccaacacttgctcagcaca 813 || ||||||| |||||||| ||||| ||||||||||||||||| ||| || || ||||| Sbjct: 774 gaactgctggccatccacgacaacgaccctgacaaagttatccagcacctgatcggcaca 833 Query: 814 tcatgagtccagaacgagaagcttctcatatccccccatgtacaggtccat 864 |||| |||||||||| | | || | ||||| |||||||||| |||||||| Sbjct: 834 tcat-agtccagaacaaaactctccacatattcccccatgtataggtccat 883 >dbj|AK121877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033104I02, full insert sequence Length = 1072 Score = 585 bits (295), Expect = e-163 Identities = 473/531 (89%), Gaps = 1/531 (0%) Strand = Plus / Plus Query: 334 tcctccacatcgataggcatacaggttgtgataaagccagaatatcggataacccctcct 393 |||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 356 tcctccacatcgatgggcatacaagttgtgataaagccagcatatcggataacccctcct 415 Query: 394 cctcaattggcaccacagatagtagaagttccccgcagcaccttcaactttgattttgag 453 ||||| ||| | |||||| | |||| |||| ||||| |||||||| |||||||||||| Sbjct: 416 cctcagttgccgccacagcttacagaaattcctcgcagtaccttcaattttgattttgag 475 Query: 454 tatgaaagaaagattcttgctgaggcagagaaggagaaccccaactggagcaagtttgtg 513 |||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 476 tatgaaaggaaaattcttgctgaggctgagaaggagaaccccaactggagcaagtttgtg 535 Query: 514 gtagaaagccagctaccaccacaggcacagccgccaagaggcccaagacacgcagctccc 573 |||| || |||| |||||||| ||||||||||||||||||||| || | || ||||| Sbjct: 536 atagagagtcagccaccaccaccaccacagccgccaagaggcccaaaactcacaactccc 595 Query: 574 actacctctgtggctacaccaggggatccagttgtggacaaatatatcgccatggggctt 633 ||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 596 actacttctgtggctactccaggggatccagttgtggacaagtatatatccatggggctt 655 Query: 634 agacgtgaagctgtctcatttgctgtgttgaattatggagataatccagcgaaggtgaag 693 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 656 ggacgtgaagctgtctcatttgctgtgttgaactatggagataatccagcgaaggtgaag 715 Query: 694 gaatttgtgaaatcctacaatgctctccacgagatgggcttcacgtccccaaacgttccc 753 || ||||||||||||||||| ||||||||||||||||||||||| ||| |||| |||||| Sbjct: 716 gagtttgtgaaatcctacaacgctctccacgagatgggcttcacatcctcaaatgttccc 775 Query: 754 gagttgctggcgatccacgataacgatcctgacaaagttatccaacacttgctcagcaca 813 || ||||||| |||||||| ||||| ||||||||||||||||| ||| || || ||||| Sbjct: 776 gaactgctggccatccacgacaacgaccctgacaaagttatccagcacctgatcggcaca 835 Query: 814 tcatgagtccagaacgagaagcttctcatatccccccatgtacaggtccat 864 |||| |||||||||| | | || | ||||| |||||||||| |||||||| Sbjct: 836 tcat-agtccagaacaaaactctccacatattcccccatgtataggtccat 885 >emb|CT827998.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA032F12, full insert sequence Length = 1029 Score = 527 bits (266), Expect = e-146 Identities = 478/546 (87%), Gaps = 2/546 (0%) Strand = Plus / Plus Query: 334 tcctccacatcgataggcatacaggttgtgataaagccagaatatcggataacccctcct 393 |||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 354 tcctccacatcgatgggcatacaagttgtgataaagccagcatatcggataacccctcct 413 Query: 394 cctcaattggcaccacagatagtagaagttccccgcagcaccttcaactttgattttgag 453 ||||| ||| | |||||| | |||| |||| ||||| |||||||| |||||||||||| Sbjct: 414 cctcagttgccgccacagcttacagaaattcctcgcagtaccttcaattttgattttgag 473 Query: 454 tatgaaagaaagattcttgctgaggcagagaaggagaaccccaactggagcaagtttgtg 513 |||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 474 tatgaaaggaaaattcttgctgaggctgagaaggagaaccccaactggagcaagtttgtg 533 Query: 514 gtagaaagccagctaccaccacaggcacagccgccaagaggccc-aagacacgcagctcc 572 |||| || |||| | |||||| ||||||||||||||||||| || || | || |||| Sbjct: 534 atagagagtcagccatcaccaccaccacagccgccaagaggccccaaaactcacaactcc 593 Query: 573 cactacctctgtggctacaccaggggatccagttgtggacaaatatatcgccatggggct 632 | |||| ||||||||||| |||||||||||| | |||||||| ||||| |||||||||| Sbjct: 594 ccctacttctgtggctactccaggggatccaatagtggacaagtatatatccatggggct 653 Query: 633 tagacgtgaagctgtctcatttgctgtgttgaattatggagataatccagcgaaggtgaa 692 | ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 654 tggacgtgaagctgtctcatttgctgtgttgaactacggagataatccagcgaaggtgaa 713 Query: 693 ggaatttgtgaaatcctacaatgctctccacgagatgggcttcacgtccccaaacgttcc 752 ||| ||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||| Sbjct: 714 ggagtttgtgaaatcctacaacgctctccacgagatgggcttcacatcctcaaatgttcc 773 Query: 753 cgagttgctggcgatccacgataacgatcctgacaaagttatccaacacttgctcagcac 812 |||| ||||| | |||||||| ||||| ||||||||||||||||| ||| || || |||| Sbjct: 774 cgagctgctgcccatccacgacaacgaccctgacaaagttatccagcacctgatcggcac 833 Query: 813 atcatgagtccagaacgagaagcttctcatatccccccatgtacaggtccatacctatgc 872 ||||| |||||||||| | | || | ||||| |||||||||| |||| ||| | |||| Sbjct: 834 atcat-agtccagaacaaaactctccacatattcccccatgtataggttcatcctaatgc 892 Query: 873 tggcaa 878 |||||| Sbjct: 893 tggcaa 898 >gb|AY108490.1| Zea mays PCO144884 mRNA sequence Length = 1182 Score = 192 bits (97), Expect = 2e-45 Identities = 154/173 (89%) Strand = Plus / Plus Query: 349 ggcatacaggttgtgataaagccagaatatcggataacccctcctcctcaattggcacca 408 |||||||| |||| ||||||||| |||| || || ||||| |||||||||||| ||||| Sbjct: 426 ggcatacaagttgcgataaagcctgaattccgcattaccccacctcctcaattgccacca 485 Query: 409 cagatagtagaagttccccgcagcaccttcaactttgattttgagtatgaaagaaagatt 468 |||| ||||| |||| |||||||||||||||||||||||||||||||| |||| |||| Sbjct: 486 gagatggtagagattcctcgcagcaccttcaactttgattttgagtatgagagaatgatt 545 Query: 469 cttgctgaggcagagaaggagaaccccaactggagcaagtttgtggtagaaag 521 |||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 546 cttgctgaggcagagaaggagaaccccaactggactaaatttgtggtagaaag 598 Score = 176 bits (89), Expect = 1e-40 Identities = 176/205 (85%) Strand = Plus / Plus Query: 593 caggggatccagttgtggacaaatatatcgccatggggcttagacgtgaagctgtctcat 652 |||||||||||||||| ||||| ||| || | ||||||||| | ||| |||| ||||||| Sbjct: 649 caggggatccagttgttgacaagtatgtctcaatggggcttgggcgtcaagccgtctcat 708 Query: 653 ttgctgtgttgaattatggagataatccagcgaaggtgaaggaatttgtgaaatcctaca 712 |||| |||||||||||||||||||||||| | |||||||| || || ||||||||||||| Sbjct: 709 ttgcggtgttgaattatggagataatccaacaaaggtgaaagagttcgtgaaatcctaca 768 Query: 713 atgctctccacgagatgggcttcacgtccccaaacgttcccgagttgctggcgatccacg 772 |||||||||||||||||||| || |||||||| |||||| |||| || ||||||| Sbjct: 769 gcatcctccacgagatgggcttcacatcgccaaacgtccccgagctgctagccatccacg 828 Query: 773 ataacgatcctgacaaagttatcca 797 | |||||||| |||||||| ||||| Sbjct: 829 acaacgatcccgacaaagtcatcca 853 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 186 bits (94), Expect = 1e-43 Identities = 151/170 (88%) Strand = Plus / Minus Query: 417 agaagttccccgcagcaccttcaactttgattttgagtatgaaagaaagattcttgctga 476 |||| |||| ||||| |||||||| |||||||||||||||||||| || ||||||||||| Sbjct: 3060271 agaaattcctcgcagtaccttcaattttgattttgagtatgaaaggaaaattcttgctga 3060212 Query: 477 ggcagagaaggagaaccccaactggagcaagtttgtggtagaaagccagctaccaccaca 536 ||| ||||||||||||||||||||||||||||||||| |||| || |||| |||||||| Sbjct: 3060211 ggctgagaaggagaaccccaactggagcaagtttgtgatagagagtcagccaccaccacc 3060152 Query: 537 ggcacagccgccaagaggcccaagacacgcagctcccactacctctgtgg 586 ||||||||||||||||||||| || | || |||||||||| ||||||| Sbjct: 3060151 accacagccgccaagaggcccaaaactcacaactcccactacttctgtgg 3060102 Score = 165 bits (83), Expect = 5e-37 Identities = 156/179 (87%), Gaps = 1/179 (0%) Strand = Plus / Minus Query: 686 aggtgaaggaatttgtgaaatcctacaatgctctccacgagatgggcttcacgtccccaa 745 |||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| ||| Sbjct: 3059363 aggtgaaggagtttgtgaaatcctacaacgctctccacgagatgggcttcacatcctcaa 3059304 Query: 746 acgttcccgagttgctggcgatccacgataacgatcctgacaaagttatccaacacttgc 805 | |||||||| ||||||| |||||||| ||||| ||||||||||||||||| ||| || Sbjct: 3059303 atgttcccgaactgctggccatccacgacaacgaccctgacaaagttatccagcacctga 3059244 Query: 806 tcagcacatcatgagtccagaacgagaagcttctcatatccccccatgtacaggtccat 864 || ||||||||| |||||||||| | | || | ||||| |||||||||| |||||||| Sbjct: 3059243 tcggcacatcat-agtccagaacaaaactctccacatattcccccatgtataggtccat 3059186 Score = 159 bits (80), Expect = 3e-35 Identities = 98/104 (94%) Strand = Plus / Minus Query: 585 ggctacaccaggggatccagttgtggacaaatatatcgccatggggcttagacgtgaagc 644 |||||| ||||||||||||||||||||||| ||||| ||||||||||| |||||||||| Sbjct: 3059796 ggctactccaggggatccagttgtggacaagtatatatccatggggcttggacgtgaagc 3059737 Query: 645 tgtctcatttgctgtgttgaattatggagataatccagcgaagg 688 ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 3059736 tgtctcatttgctgtgttgaactatggagataatccagcgaagg 3059693