BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst038k23 (636 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001067599.1| Oryza sativa (japonica cultivar-group) Os08g... 196 8e-47 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 196 8e-47 dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic D... 196 8e-47 gb|BT017826.1| Zea mays clone EL01N0508D09.c mRNA sequence 129 1e-26 >ref|NM_001067599.1| Oryza sativa (japonica cultivar-group) Os08g0163300 (Os08g0163300) mRNA, complete cds Length = 456 Score = 196 bits (99), Expect = 8e-47 Identities = 165/187 (88%), Gaps = 10/187 (5%) Strand = Plus / Plus Query: 281 ggaggaggaggaggaccgggggagggcggctcgggagttcgacatggacatgcgctacgg 340 |||||||||||||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct: 270 ggaggaggaggaggggcgggagaggatggctcgggagttcgacatggacatgcggtacgg 329 Query: 341 gccctgcctcagcctcacccgcgcccagcgctggcgccgcgccgaggcgctcggcctcgc 400 |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 330 gccctgcctcggcctcacccgcgcccagcgctggcgccgcgccgccgcgctcggcctcgc 389 Query: 401 cccgccgcccgccct---------ctgctccgacgcccagccatgcctct-ggagggccg 450 ||||||||||||| | ||||||||||| |||||| ||||||| ||||||||| Sbjct: 390 cccgccgcccgccgtcatcgccgtctgctccgacgaccagccgtgcctctgggagggccg 449 Query: 451 cgtctag 457 ||||||| Sbjct: 450 cgtctag 456 >dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 196 bits (99), Expect = 8e-47 Identities = 165/187 (88%), Gaps = 10/187 (5%) Strand = Plus / Minus Query: 281 ggaggaggaggaggaccgggggagggcggctcgggagttcgacatggacatgcgctacgg 340 |||||||||||||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct: 3722153 ggaggaggaggaggggcgggagaggatggctcgggagttcgacatggacatgcggtacgg 3722094 Query: 341 gccctgcctcagcctcacccgcgcccagcgctggcgccgcgccgaggcgctcggcctcgc 400 |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 3722093 gccctgcctcggcctcacccgcgcccagcgctggcgccgcgccgccgcgctcggcctcgc 3722034 Query: 401 cccgccgcccgccct---------ctgctccgacgcccagccatgcctct-ggagggccg 450 ||||||||||||| | ||||||||||| |||||| ||||||| ||||||||| Sbjct: 3722033 cccgccgcccgccgtcatcgccgtctgctccgacgaccagccgtgcctctgggagggccg 3721974 Query: 451 cgtctag 457 ||||||| Sbjct: 3721973 cgtctag 3721967 Score = 83.8 bits (42), Expect = 8e-13 Identities = 51/54 (94%) Strand = Plus / Minus Query: 49 cggagccatgaggagcggcggcgacatgaagtccttcttccggcagcagaaggc 102 ||||||||||||||||||||||||| | | |||||||||||||||||||||||| Sbjct: 3722429 cggagccatgaggagcggcggcgacgtcaggtccttcttccggcagcagaaggc 3722376 >dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ9990_A01 Length = 101684 Score = 196 bits (99), Expect = 8e-47 Identities = 165/187 (88%), Gaps = 10/187 (5%) Strand = Plus / Minus Query: 281 ggaggaggaggaggaccgggggagggcggctcgggagttcgacatggacatgcgctacgg 340 |||||||||||||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct: 45650 ggaggaggaggaggggcgggagaggatggctcgggagttcgacatggacatgcggtacgg 45591 Query: 341 gccctgcctcagcctcacccgcgcccagcgctggcgccgcgccgaggcgctcggcctcgc 400 |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 45590 gccctgcctcggcctcacccgcgcccagcgctggcgccgcgccgccgcgctcggcctcgc 45531 Query: 401 cccgccgcccgccct---------ctgctccgacgcccagccatgcctct-ggagggccg 450 ||||||||||||| | ||||||||||| |||||| ||||||| ||||||||| Sbjct: 45530 cccgccgcccgccgtcatcgccgtctgctccgacgaccagccgtgcctctgggagggccg 45471 Query: 451 cgtctag 457 ||||||| Sbjct: 45470 cgtctag 45464 Score = 83.8 bits (42), Expect = 8e-13 Identities = 51/54 (94%) Strand = Plus / Minus Query: 49 cggagccatgaggagcggcggcgacatgaagtccttcttccggcagcagaaggc 102 ||||||||||||||||||||||||| | | |||||||||||||||||||||||| Sbjct: 45926 cggagccatgaggagcggcggcgacgtcaggtccttcttccggcagcagaaggc 45873 >gb|BT017826.1| Zea mays clone EL01N0508D09.c mRNA sequence Length = 682 Score = 129 bits (65), Expect = 1e-26 Identities = 155/185 (83%), Gaps = 10/185 (5%) Strand = Plus / Plus Query: 284 ggaggaggaggaccgggggagggcggctcgggagttcgacatggacatgcgctacgggcc 343 ||||| |||| | |||| |||||||| || |||||||||||||||| |||||||||||| Sbjct: 59 ggaggcggagcagcgggagagggcgggccgcgagttcgacatggacacgcgctacgggcc 118 Query: 344 ctgcctcagcctcacccgcgcccagcgctggcgccgcgccgaggcgctcggcctcgcccc 403 |||||| || |||||||| ||||||| ||||||||||||| |||||||||||||| || Sbjct: 119 atgcctcggcgtcacccgcccccagcggtggcgccgcgccgccgcgctcggcctcgcacc 178 Query: 404 gccgcc---------cgccctctgctccgacgcccagccatgcctct-ggagggccgcgt 453 |||||| |||||||||| |||||| ||||| ||||||| |||||||||||| Sbjct: 179 gccgccggcgctcctcgccctctgcgccgacgaacagccctgcctctgggagggccgcgt 238 Query: 454 ctagg 458 ||||| Sbjct: 239 ctagg 243