BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst038j10 (713 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001071136.1| Oryza sativa (japonica cultivar-group) Os10g... 149 2e-32 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 149 2e-32 dbj|AK069676.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 2e-32 gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nb... 149 2e-32 emb|CT834530.1| Oryza sativa (indica cultivar-group) cDNA clone:... 137 7e-29 >ref|NM_001071136.1| Oryza sativa (japonica cultivar-group) Os10g0415400 (Os10g0415400) mRNA, complete cds Length = 1050 Score = 149 bits (75), Expect = 2e-32 Identities = 169/198 (85%), Gaps = 3/198 (1%) Strand = Plus / Plus Query: 384 tcccaggcctagccaccatgacctgcccatctatggccttccaggccaagccccagcgca 443 |||||||||| ||||||||| |||||||||||| ||| ||| |||||||||||| | Sbjct: 678 tcccaggcctcaccaccatgaattgcccatctatgccctcccaacccaagccccagctcg 737 Query: 444 atgacccctcataagacggggtc-tgattctgcacgtgcccatcgaccactcctgcaaac 502 | | ||||| ||||| ||| || | ||||||||||||||||||||||||||||||||| Sbjct: 738 gtaaaccctcgtaagaggggttccttgttctgcacgtgcccatcgaccactcctgcaaac 797 Query: 503 cgttctcctgccaaatgcggatgaactcatcggcg--cttctccttcctggaagagcact 560 ||||||||||||||| |||| |||||||||||| | || |||||| ||| | |||||| Sbjct: 798 cgttctcctgccaaacgcggttgaactcatcggtgtttttttccttcatgggatagcact 857 Query: 561 ggtgatacctaactatat 578 |||||||||||||||||| Sbjct: 858 ggtgatacctaactatat 875 >dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 149 bits (75), Expect = 2e-32 Identities = 169/198 (85%), Gaps = 3/198 (1%) Strand = Plus / Minus Query: 384 tcccaggcctagccaccatgacctgcccatctatggccttccaggccaagccccagcgca 443 |||||||||| ||||||||| |||||||||||| ||| ||| |||||||||||| | Sbjct: 13999472 tcccaggcctcaccaccatgaattgcccatctatgccctcccaacccaagccccagctcg 13999413 Query: 444 atgacccctcataagacggggtc-tgattctgcacgtgcccatcgaccactcctgcaaac 502 | | ||||| ||||| ||| || | ||||||||||||||||||||||||||||||||| Sbjct: 13999412 gtaaaccctcgtaagaggggttccttgttctgcacgtgcccatcgaccactcctgcaaac 13999353 Query: 503 cgttctcctgccaaatgcggatgaactcatcggcg--cttctccttcctggaagagcact 560 ||||||||||||||| |||| |||||||||||| | || |||||| ||| | |||||| Sbjct: 13999352 cgttctcctgccaaacgcggttgaactcatcggtgtttttttccttcatgggatagcact 13999293 Query: 561 ggtgatacctaactatat 578 |||||||||||||||||| Sbjct: 13999292 ggtgatacctaactatat 13999275 >dbj|AK069676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026F22, full insert sequence Length = 1060 Score = 149 bits (75), Expect = 2e-32 Identities = 169/198 (85%), Gaps = 3/198 (1%) Strand = Plus / Plus Query: 384 tcccaggcctagccaccatgacctgcccatctatggccttccaggccaagccccagcgca 443 |||||||||| ||||||||| |||||||||||| ||| ||| |||||||||||| | Sbjct: 688 tcccaggcctcaccaccatgaattgcccatctatgccctcccaacccaagccccagctcg 747 Query: 444 atgacccctcataagacggggtc-tgattctgcacgtgcccatcgaccactcctgcaaac 502 | | ||||| ||||| ||| || | ||||||||||||||||||||||||||||||||| Sbjct: 748 gtaaaccctcgtaagaggggttccttgttctgcacgtgcccatcgaccactcctgcaaac 807 Query: 503 cgttctcctgccaaatgcggatgaactcatcggcg--cttctccttcctggaagagcact 560 ||||||||||||||| |||| |||||||||||| | || |||||| ||| | |||||| Sbjct: 808 cgttctcctgccaaacgcggttgaactcatcggtgtttttttccttcatgggatagcact 867 Query: 561 ggtgatacctaactatat 578 |||||||||||||||||| Sbjct: 868 ggtgatacctaactatat 885 >gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 149 bits (75), Expect = 2e-32 Identities = 169/198 (85%), Gaps = 3/198 (1%) Strand = Plus / Minus Query: 384 tcccaggcctagccaccatgacctgcccatctatggccttccaggccaagccccagcgca 443 |||||||||| ||||||||| |||||||||||| ||| ||| |||||||||||| | Sbjct: 15601 tcccaggcctcaccaccatgaattgcccatctatgccctcccaacccaagccccagctcg 15542 Query: 444 atgacccctcataagacggggtc-tgattctgcacgtgcccatcgaccactcctgcaaac 502 | | ||||| ||||| ||| || | ||||||||||||||||||||||||||||||||| Sbjct: 15541 gtaaaccctcgtaagaggggttccttgttctgcacgtgcccatcgaccactcctgcaaac 15482 Query: 503 cgttctcctgccaaatgcggatgaactcatcggcg--cttctccttcctggaagagcact 560 ||||||||||||||| |||| |||||||||||| | || |||||| ||| | |||||| Sbjct: 15481 cgttctcctgccaaacgcggttgaactcatcggtgtttttttccttcatgggatagcact 15422 Query: 561 ggtgatacctaactatat 578 |||||||||||||||||| Sbjct: 15421 ggtgatacctaactatat 15404 >emb|CT834530.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109C09, full insert sequence Length = 1044 Score = 137 bits (69), Expect = 7e-29 Identities = 168/199 (84%), Gaps = 4/199 (2%) Strand = Plus / Plus Query: 384 tcccaggcctagccaccatgacctgcccatctatggccttccaggccaagccccagcgca 443 |||||||||| ||||||||| |||||||||||| ||| ||| |||||||||||| | Sbjct: 670 tcccaggcctcaccaccatgaattgcccatctatgtcctcccaacccaagccccagctcg 729 Query: 444 atgacccctcataagacggggtc-tgattctgcacgtgcccatcgaccactcctgcaaac 502 | | ||||| ||||| ||| || | ||||||||||||||||||||||||||||||||| Sbjct: 730 gtaaaccctcgtaagaggggttccttgttctgcacgtgcccatcgaccactcctgcaaac 789 Query: 503 cgttctcctgccaaatgcggatgaactcatcggcg---cttctccttcctggaagagcac 559 ||||||||||||||| || | |||||||||||| | || |||||| ||| | ||||| Sbjct: 790 cgttctcctgccaaacgcagttgaactcatcggtgttttttttccttcatgggatagcac 849 Query: 560 tggtgatacctaactatat 578 ||||||||||||||||||| Sbjct: 850 tggtgatacctaactatat 868