BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst038i02 (834 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT836221.1| Oryza sativa (indica cultivar-group) cDNA clone:... 609 e-171 gb|AY106978.1| Zea mays PCO148074 mRNA sequence 426 e-116 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 293 6e-76 dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic D... 293 6e-76 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 113 1e-21 >emb|CT836221.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA333Z87, full insert sequence Length = 808 Score = 609 bits (307), Expect = e-171 Identities = 558/639 (87%), Gaps = 2/639 (0%) Strand = Plus / Plus Query: 69 gagcatggtgagacctcaaaggcgcccctgagcaggggggtcagtaaaggagtgtccatc 128 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 71 gagcatggtgagacctcaaaggcacccctgagcaggggggtcagtaaaggagtgtctata 130 Query: 129 cttgacctcatacttcgcttcattgcgatcatcggcacacttgcaagtgccatttctatg 188 || || | ||||||||||| | |||||||| ||||| || || ||||||||| | ||| Sbjct: 131 ctcgatgttatacttcgctttgtcgcgatcattggcaccctcgcgagtgccattgccatg 190 Query: 189 ggcaccaccaaccaaacgctgcctttcttcacgcagttcatccggttcaaggcgcagtac 248 ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 191 ggcaccaccaatcagacgctgcctttcttcacccagttcatccggttcaaggcgcaatac 250 Query: 249 agtgatctcccgactctcacgttctttgtggtggcaaattctgtcgtatgcgcctatctc 308 || |||||||| ||||||||||| |||||||||||||| ||| | || | ||||||||| Sbjct: 251 agcgatctcccaactctcacgttttttgtggtggcaaactctattgtctctgcctatctc 310 Query: 309 atcctttcgctcccattgtcaattgtgcacataattaggagcagggcaaaattcagcagg 368 |||||||| |||||| |||||||||||||| | |||||||||||||| || | |||||| Sbjct: 311 atcctttcactcccactgtcaattgtgcacgtcattaggagcagggctaagtatagcagg 370 Query: 369 ctgatcttgatcttctttgacgcggcaatgctatctctggtgaccgcaggggcatctgca 428 || ||||||||||| || || |||||||||||| ||||||||||||| ||||||||||| Sbjct: 371 ctcatcttgatctttttcgatgcggcaatgctagctctggtgaccgcgggggcatctgct 430 Query: 429 gcagcagctattgtgtacttagcacacaagggtaatgtcagggcaaactggcttgctatt 488 |||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||| Sbjct: 431 gcagcagctattgtgtacttagcacacaagggaaatgccagagcaaactggcttgctatt 490 Query: 489 tgccagcagttcgactcattctgcgagcgtatctctggctccctgattggctcgtttgca 548 ||||||||||| || || ||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 491 tgccagcagtttgattccttctgtgagcgcatctctggctccctgattggctcatttgca 550 Query: 549 gccatggttgtgctgatactgctcatattcctctctgccattgccctggcgaggcgctag 608 ||||||||||||||| ||||||||||||||||||| || ||||| | || ||||| ||| Sbjct: 551 gccatggttgtgctggtactgctcatattcctctcggctattgcattagccaggcgatag 610 Query: 609 accaaattgtgcatcgttcgctccctgcagtatgaagtgtgata-catggtgtggttctt 667 ||||||||| | ||| ||| |||| ||| |||||| | ||| |||| | ||||||| Sbjct: 611 accaaattgccaactgtttgcttcctgtagtgtgaagtatcatattatggcgaggttctt 670 Query: 668 gtacttgcttgcttaatgtaataatctgtgagcctattt 706 | |||| ||||| | ||||||||||||||| |||||||| Sbjct: 671 gcacttacttgcct-atgtaataatctgtgtgcctattt 708 >gb|AY106978.1| Zea mays PCO148074 mRNA sequence Length = 722 Score = 426 bits (215), Expect = e-116 Identities = 465/547 (85%), Gaps = 6/547 (1%) Strand = Plus / Plus Query: 68 cgagcatggtgagacctcaaag---gcgcccctg---agcaggggggtcagtaaaggagt 121 ||||||||| |||||||| ||| ||||||||| |||||||| ||||| |||||||| Sbjct: 98 cgagcatggcgagacctcgaagcaggcgcccctgggcagcaggggtgtcagcaaaggagt 157 Query: 122 gtccatccttgacctcatacttcgcttcattgcgatcatcggcacacttgcaagtgccat 181 |||| | ||||| || ||||||||||||||||| ||||||||||| || || || ||||| Sbjct: 158 gtccgtgcttgatctaatacttcgcttcattgccatcatcggcaccctcgctagcgccat 217 Query: 182 ttctatgggcaccaccaaccaaacgctgcctttcttcacgcagttcatccggttcaaggc 241 | | ||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 218 tgcaatgggcaccaccaacgagacgctgcctttcttcacgcagttcatccggttcaaggc 277 Query: 242 gcagtacagtgatctcccgactctcacgttctttgtggtggcaaattctgtcgtatgcgc 301 ||||||||| |||||||| |||||||||||||| || ||||| ||||| | || ||||| Sbjct: 278 gcagtacagcgatctccctactctcacgttcttcgtcgtggcgaattccattgtctgcgc 337 Query: 302 ctatctcatcctttcgctcccattgtcaattgtgcacataattaggagcagggcaaaatt 361 ||||||| ||| ||||||||| | || || |||||||| |||||||||||||| |||| Sbjct: 338 ttatctcaccctgtcgctcccactatctatagtgcacatcattaggagcagggctaaata 397 Query: 362 cagcaggctgatcttgatcttctttgacgcggcaatgctatctctggtgaccgcaggggc 421 |||||||||| ||||| || | ||||||||||||||||| | ||||||| || || || Sbjct: 398 cagcaggctgctcttggtcgttcttgacgcggcaatgctagcattggtgactgcgggagc 457 Query: 422 atctgcagcagcagctattgtgtacttagcacacaagggtaatgtcagggcaaactggct 481 |||||| ||||| || |||||||||||||| ||||| || || ||||| ||||||||||| Sbjct: 458 atctgcggcagcggccattgtgtacttagcgcacaaaggcaacgtcagagcaaactggct 517 Query: 482 tgctatttgccagcagttcgactcattctgcgagcgtatctctggctccctgattggctc 541 ||| |||||||||||||| ||||| |||||||||||||||||||| ||||| |||| || Sbjct: 518 tgccatttgccagcagtttgactcgttctgcgagcgtatctctggatccctcgttggttc 577 Query: 542 gtttgcagccatggttgtgctgatactgctcatattcctctctgccattgccctggcgag 601 ||| | ||||||||| |||| ||||||| || | ||||| |||||||| || || || Sbjct: 578 gttcggagccatggtcatgctcgtactgctgctactactctccgccattgctctagccag 637 Query: 602 gcgctag 608 ||||||| Sbjct: 638 gcgctag 644 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 293 bits (148), Expect = 6e-76 Identities = 276/316 (87%), Gaps = 2/316 (0%) Strand = Plus / Plus Query: 392 ggcaatgctatctctggtgaccgcaggggcatctgcagcagcagctattgtgtacttagc 451 |||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 6800451 ggcaatgctagctctggtgaccgcgggggcatctgctgcagcagctattgtgtacttagc 6800510 Query: 452 acacaagggtaatgtcagggcaaactggcttgctatttgccagcagttcgactcattctg 511 ||||||||| |||| ||| ||||||||||||||||||||||||||||| || || ||||| Sbjct: 6800511 acacaagggaaatgccagagcaaactggcttgctatttgccagcagtttgattccttctg 6800570 Query: 512 cgagcgtatctctggctccctgattggctcgtttgcagccatggttgtgctgatactgct 571 ||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 6800571 tgagcgcatctctggctccctgattggctcatttgcagccatggttgtgctggtactgct 6800630 Query: 572 catattcctctctgccattgccctggcgaggcgctagaccaaattgtgcatcgttcgctc 631 |||||||||||| || ||||| | || ||||| |||||||||||| | ||| ||| Sbjct: 6800631 catattcctctcggctattgcattagccaggcgatagaccaaattgccaactgtttgctt 6800690 Query: 632 cctgcagtatgaagtgtgata-catggtgtggttcttgtacttgcttgcttaatgtaata 690 |||| ||| |||||| | ||| |||| | |||||||| |||| ||||| | |||||||| Sbjct: 6800691 cctgtagtgtgaagtatcatattatggcgaggttcttgcacttacttgcct-atgtaata 6800749 Query: 691 atctgtgagcctattt 706 ||||||| |||||||| Sbjct: 6800750 atctgtgtgcctattt 6800765 Score = 226 bits (114), Expect = 1e-55 Identities = 180/202 (89%) Strand = Plus / Plus Query: 69 gagcatggtgagacctcaaaggcgcccctgagcaggggggtcagtaaaggagtgtccatc 128 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 6799872 gagcatggtgagacctcaaaggcacccctgagcaggggggtcagtaaaggagtgtctata 6799931 Query: 129 cttgacctcatacttcgcttcattgcgatcatcggcacacttgcaagtgccatttctatg 188 || || | ||||||||||| | |||||||| ||||| || || ||||||||| | ||| Sbjct: 6799932 ctcgatgttatacttcgctttgtcgcgatcattggcaccctcgcgagtgccattgccatg 6799991 Query: 189 ggcaccaccaaccaaacgctgcctttcttcacgcagttcatccggttcaaggcgcagtac 248 ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 6799992 ggcaccaccaatcagacgctgcctttcttcacccagttcatccggttcaaggcgcaatac 6800051 Query: 249 agtgatctcccgactctcacgt 270 || |||||||| |||||||||| Sbjct: 6800052 agcgatctcccaactctcacgt 6800073 Score = 99.6 bits (50), Expect = 2e-17 Identities = 95/110 (86%) Strand = Plus / Plus Query: 273 tttgtggtggcaaattctgtcgtatgcgcctatctcatcctttcgctcccattgtcaatt 332 |||||||||||||| ||| | || | ||||||||||||||||| |||||| |||||||| Sbjct: 6800172 tttgtggtggcaaactctattgtctctgcctatctcatcctttcactcccactgtcaatt 6800231 Query: 333 gtgcacataattaggagcagggcaaaattcagcaggctgatcttgatctt 382 |||||| | |||||||||||||| || | |||||||| ||||||||||| Sbjct: 6800232 gtgcacgtcattaggagcagggctaagtatagcaggctcatcttgatctt 6800281 >dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0525F01 Length = 151668 Score = 293 bits (148), Expect = 6e-76 Identities = 276/316 (87%), Gaps = 2/316 (0%) Strand = Plus / Plus Query: 392 ggcaatgctatctctggtgaccgcaggggcatctgcagcagcagctattgtgtacttagc 451 |||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 130130 ggcaatgctagctctggtgaccgcgggggcatctgctgcagcagctattgtgtacttagc 130189 Query: 452 acacaagggtaatgtcagggcaaactggcttgctatttgccagcagttcgactcattctg 511 ||||||||| |||| ||| ||||||||||||||||||||||||||||| || || ||||| Sbjct: 130190 acacaagggaaatgccagagcaaactggcttgctatttgccagcagtttgattccttctg 130249 Query: 512 cgagcgtatctctggctccctgattggctcgtttgcagccatggttgtgctgatactgct 571 ||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 130250 tgagcgcatctctggctccctgattggctcatttgcagccatggttgtgctggtactgct 130309 Query: 572 catattcctctctgccattgccctggcgaggcgctagaccaaattgtgcatcgttcgctc 631 |||||||||||| || ||||| | || ||||| |||||||||||| | ||| ||| Sbjct: 130310 catattcctctcggctattgcattagccaggcgatagaccaaattgccaactgtttgctt 130369 Query: 632 cctgcagtatgaagtgtgata-catggtgtggttcttgtacttgcttgcttaatgtaata 690 |||| ||| |||||| | ||| |||| | |||||||| |||| ||||| | |||||||| Sbjct: 130370 cctgtagtgtgaagtatcatattatggcgaggttcttgcacttacttgcct-atgtaata 130428 Query: 691 atctgtgagcctattt 706 ||||||| |||||||| Sbjct: 130429 atctgtgtgcctattt 130444 Score = 226 bits (114), Expect = 1e-55 Identities = 180/202 (89%) Strand = Plus / Plus Query: 69 gagcatggtgagacctcaaaggcgcccctgagcaggggggtcagtaaaggagtgtccatc 128 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 129551 gagcatggtgagacctcaaaggcacccctgagcaggggggtcagtaaaggagtgtctata 129610 Query: 129 cttgacctcatacttcgcttcattgcgatcatcggcacacttgcaagtgccatttctatg 188 || || | ||||||||||| | |||||||| ||||| || || ||||||||| | ||| Sbjct: 129611 ctcgatgttatacttcgctttgtcgcgatcattggcaccctcgcgagtgccattgccatg 129670 Query: 189 ggcaccaccaaccaaacgctgcctttcttcacgcagttcatccggttcaaggcgcagtac 248 ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 129671 ggcaccaccaatcagacgctgcctttcttcacccagttcatccggttcaaggcgcaatac 129730 Query: 249 agtgatctcccgactctcacgt 270 || |||||||| |||||||||| Sbjct: 129731 agcgatctcccaactctcacgt 129752 Score = 99.6 bits (50), Expect = 2e-17 Identities = 95/110 (86%) Strand = Plus / Plus Query: 273 tttgtggtggcaaattctgtcgtatgcgcctatctcatcctttcgctcccattgtcaatt 332 |||||||||||||| ||| | || | ||||||||||||||||| |||||| |||||||| Sbjct: 129851 tttgtggtggcaaactctattgtctctgcctatctcatcctttcactcccactgtcaatt 129910 Query: 333 gtgcacataattaggagcagggcaaaattcagcaggctgatcttgatctt 382 |||||| | |||||||||||||| || | |||||||| ||||||||||| Sbjct: 129911 gtgcacgtcattaggagcagggctaagtatagcaggctcatcttgatctt 129960 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 113 bits (57), Expect = 1e-21 Identities = 72/77 (93%) Strand = Plus / Minus Query: 186 atgggcaccaccaaccaaacgctgcctttcttcacgcagttcatccggttcaaggcgcag 245 ||||||||||||||||| ||||| || ||||||||||||||| ||||||||||||||||| Sbjct: 31218094 atgggcaccaccaaccagacgctcccgttcttcacgcagttcctccggttcaaggcgcag 31218035 Query: 246 tacagtgatctcccgac 262 |||||||| |||||||| Sbjct: 31218034 tacagtgacctcccgac 31218018