BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst038f17
         (720 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...   202   1e-48
dbj|AP004688.3| Oryza sativa (japonica cultivar-group) genomic D...   202   1e-48
emb|CT835423.1| Oryza sativa (indica cultivar-group) cDNA clone:...    90   1e-14
ref|NM_001054431.1| Oryza sativa (japonica cultivar-group) Os02g...    90   1e-14
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...    90   1e-14

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score =  202 bits (102), Expect = 1e-48
 Identities = 173/196 (88%), Gaps = 3/196 (1%)
 Strand = Plus / Plus

                                                                            
Query: 256      agcgcgactgccagctcatggggctgacgtggctgctccagcggaacgcaacgcggcacc 315
                |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| 
Sbjct: 17219770 agcgcgactgccagctcatggggctgacgtggctgctccaccggaacgccacgcggcacg 17219829

                                                                            
Query: 316      gtgcggccgccacggcggtgatccaggccctgatggcggccgacgaggcccgcaccggcc 375
                | || || |||||||||||||||||||| || ||||| |||||||| ||   ||||||||
Sbjct: 17219830 gcgccgcggccacggcggtgatccaggcgctcatggccgccgacgacgc---caccggcc 17219886

                                                                            
Query: 376      agccctcctcgtgctcgctccccgtcgacgacctgccgcttgccgtcgcctcgtcggaga 435
                 |||| || | ||||||||||||  ||||||||||||| | |||||||||||||||||||
Sbjct: 17219887 ggcccgccccttgctcgctcccctccgacgacctgccggtcgccgtcgcctcgtcggaga 17219946

                                
Query: 436      tcaatggcgctgccgc 451
                |||| ||||| |||||
Sbjct: 17219947 tcaacggcgccgccgc 17219962



 Score = 77.8 bits (39), Expect = 6e-11
 Identities = 42/43 (97%)
 Strand = Plus / Plus

                                                           
Query: 142      cgcggccggggctcgccggctgctccaggtgcctccgggcgct 184
                ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 17216675 cgcggccggggctcgccggctgctccaggtgtctccgggcgct 17216717


>dbj|AP004688.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0036C11
          Length = 137995

 Score =  202 bits (102), Expect = 1e-48
 Identities = 173/196 (88%), Gaps = 3/196 (1%)
 Strand = Plus / Plus

                                                                         
Query: 256   agcgcgactgccagctcatggggctgacgtggctgctccagcggaacgcaacgcggcacc 315
             |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| 
Sbjct: 68497 agcgcgactgccagctcatggggctgacgtggctgctccaccggaacgccacgcggcacg 68556

                                                                         
Query: 316   gtgcggccgccacggcggtgatccaggccctgatggcggccgacgaggcccgcaccggcc 375
             | || || |||||||||||||||||||| || ||||| |||||||| ||   ||||||||
Sbjct: 68557 gcgccgcggccacggcggtgatccaggcgctcatggccgccgacgacgc---caccggcc 68613

                                                                         
Query: 376   agccctcctcgtgctcgctccccgtcgacgacctgccgcttgccgtcgcctcgtcggaga 435
              |||| || | ||||||||||||  ||||||||||||| | |||||||||||||||||||
Sbjct: 68614 ggcccgccccttgctcgctcccctccgacgacctgccggtcgccgtcgcctcgtcggaga 68673

                             
Query: 436   tcaatggcgctgccgc 451
             |||| ||||| |||||
Sbjct: 68674 tcaacggcgccgccgc 68689



 Score = 77.8 bits (39), Expect = 6e-11
 Identities = 42/43 (97%)
 Strand = Plus / Plus

                                                        
Query: 142   cgcggccggggctcgccggctgctccaggtgcctccgggcgct 184
             ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 65402 cgcggccggggctcgccggctgctccaggtgtctccgggcgct 65444


>emb|CT835423.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA006N06, full
            insert sequence
          Length = 1292

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 87/101 (86%)
 Strand = Plus / Plus

                                                                        
Query: 264  tgccagctcatggggctgacgtggctgctccagcggaacgcaacgcggcaccgtgcggcc 323
            |||||||| |||||| | | ||||||||| ||||||||||| |||||| || | ||||| 
Sbjct: 903  tgccagctgatggggatcatgtggctgctgcagcggaacgccacgcggtacggcgcggcg 962

                                                     
Query: 324  gccacggcggtgatccaggccctgatggcggccgacgaggc 364
            ||||| || ||||||||||| |||||||| |||||||||||
Sbjct: 963  gccaccgccgtgatccaggcgctgatggccgccgacgaggc 1003


>ref|NM_001054431.1| Oryza sativa (japonica cultivar-group) Os02g0710700 (Os02g0710700)
           mRNA, complete cds
          Length = 1056

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 87/101 (86%)
 Strand = Plus / Plus

                                                                       
Query: 264 tgccagctcatggggctgacgtggctgctccagcggaacgcaacgcggcaccgtgcggcc 323
           |||||||| |||||| | | ||||||||| ||||||||||| |||||| || | ||||| 
Sbjct: 772 tgccagctgatggggatcatgtggctgctgcagcggaacgccacgcggtacggcgcggcg 831

                                                    
Query: 324 gccacggcggtgatccaggccctgatggcggccgacgaggc 364
           ||||| || ||||||||||| |||||||| |||||||||||
Sbjct: 832 gccaccgccgtgatccaggcgctgatggccgccgacgaggc 872


>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 87/101 (86%)
 Strand = Plus / Plus

                                                                            
Query: 264      tgccagctcatggggctgacgtggctgctccagcggaacgcaacgcggcaccgtgcggcc 323
                |||||||| |||||| | | ||||||||| ||||||||||| |||||| || | ||||| 
Sbjct: 29458867 tgccagctgatggggatcatgtggctgctgcagcggaacgccacgcggtacggcgcggcg 29458926

                                                         
Query: 324      gccacggcggtgatccaggccctgatggcggccgacgaggc 364
                ||||| || ||||||||||| |||||||| |||||||||||
Sbjct: 29458927 gccaccgccgtgatccaggcgctgatggccgccgacgaggc 29458967