BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst038f05 (1245 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001049062.1| Oryza sativa (japonica cultivar-group) Os01g... 490 e-135 dbj|AK065569.1| Oryza sativa (japonica cultivar-group) cDNA clon... 490 e-135 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 484 e-133 dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic D... 484 e-133 >ref|NM_001049062.1| Oryza sativa (japonica cultivar-group) Os01g0236000 (Os01g0236000) mRNA, complete cds Length = 1216 Score = 490 bits (247), Expect = e-135 Identities = 492/572 (86%), Gaps = 15/572 (2%) Strand = Plus / Plus Query: 222 cccggcgctcgccgccgccctggccgcagcggcgccggcgaaccaccagtacgtcaccca 281 ||||||| |||| ||||| || | ||| | |||||| ||| |||||| | |||||||||| Sbjct: 284 cccggcggtcgcggccgcgctcgtcgccggggcgcccgcgcaccaccggcacgtcaccca 343 Query: 282 ctccgcggcggggcgggcgcacgcgctgctcctcgcaccgccgctcgcgctctcggcggt 341 | | ||| ||||||||||||||||| |||||||||| |||||||||| |||| ||||||| Sbjct: 344 cacggcgtcggggcgggcgcacgcggtgctcctcgcgccgccgctcgtgctcgcggcggt 403 Query: 342 ctcgctcgcgccgcagcttccggcgtcccacctcctgctcttcctccgccggctgcgatg 401 ||||| || |||||||| || |||| ||||| |||||||||||||| ||||| ||||| Sbjct: 404 ctcgcgggccccgcagctgccctcgtcgcacctgctgctcttcctccggcggctccgatg 463 Query: 402 cctccccgagcccaggatgcgcgacgagatgccgcggctggcgctccgcctgcccttccc 461 ||| |||| | | ||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 464 cctacccgggaaccggatgcgggacgagatgccgcggctggcgctgcgcctgccgttccc 523 Query: 462 cgacgaggaggcgctcgcgcgcgaggccggggaggtcgccgccgccgaggccgaggcaga 521 ||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| || Sbjct: 524 cgacgaggaggcgctcgcgcgggaggccggggaggtggccgcagcggaggccgaggccga 583 Query: 522 ggaggcggcacggagggagggtgagctcgcgcggaggacgcccaagcgggagcgcgg--- 578 |||||||| |||||||| ||||||||||||||||||||||||||| |||||||| | Sbjct: 584 ggaggcggagcggagggaaggtgagctcgcgcggaggacgcccaagagggagcgccgcgc 643 Query: 579 ------cggcggcgccgggtggacgtggaggcgccagctctggttggtcgtcctcgcgga 632 ||||||||||||||||||||||||||| |||| ||| | ||||||||||||| Sbjct: 644 ccgcagcggcggcgccgggtggacgtggaggcggaagctgtggctcatcgtcctcgcgga 703 Query: 633 tctcgtgctcctctgcgtgctcttcgccgcctggctcgccgtgtgcaggggattcagctg 692 |||||||||||||| ||| |||||||| ||||||||||| ||||||| |||||||||||| Sbjct: 704 tctcgtgctcctcttcgtcctcttcgctgcctggctcgcagtgtgcaagggattcagctg 763 Query: 693 cattggccggtaaataggtaaaaaaggctgctcaagtttcaagcgaaaa----tctggag 748 ||||||||||||||||||| ||||||| |||| | |||||||| |||| | ||||| Sbjct: 764 cattggccggtaaataggt-aaaaagggtgct-aggtttcaagacaaaaaaagtgtggag 821 Query: 749 gttatttatgcagttgtttctcctgatgcatg 780 ||||||||||||| ||||||||| ||||||| Sbjct: 822 attatttatgcagtagtttctccttatgcatg 853 Score = 196 bits (99), Expect = 2e-46 Identities = 182/205 (88%), Gaps = 6/205 (2%) Strand = Plus / Plus Query: 897 tctttgaaaagcgaagcccaatggtcttgc-tagacttcataagtttgaatttgttggtt 955 |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 972 tctttgaaaaatgaagcccaatggtcttgcctagacttcataagtttgaatttgttggtt 1031 Query: 956 tgattgaggacatctgtaaaccctgtagtgtaatttttttttgttcattttctatacaaa 1015 || |||||||||||||||||||| ||||||||| |||||| |||||||| |||||| || Sbjct: 1032 tggttgaggacatctgtaaacccagtagtgtaa--ttttttcgttcatttactatac-aa 1088 Query: 1016 agaaaatgttgaaattttgccccattggtcttgttttcccc--attctggcaaggacaga 1073 || |||||||||||||||||| ||||| |||||||| |||| || || |||||||| Sbjct: 1089 agcaaatgttgaaattttgcctcattgatcttgtttcccccctatgttgttcaggacaga 1148 Query: 1074 ctcagatatatctgaatcttactgt 1098 | |||||||||||||||| |||||| Sbjct: 1149 cccagatatatctgaatcctactgt 1173 Score = 131 bits (66), Expect = 7e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 114 gctgcctcggatgctcccggcctcgcacccgctgctctacgcctgcgtcttccacgacag 173 ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| Sbjct: 158 gctgcctcggatgctcccggcctcgcacccgctgctctacgcctgcgcctaccgggacag 217 Query: 174 caccctcgtcgccgagctcgcccacgcccc 203 | ||||||||||||| |||||||||||||| Sbjct: 218 cgccctcgtcgccgacctcgcccacgcccc 247 >dbj|AK065569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026L08, full insert sequence Length = 1217 Score = 490 bits (247), Expect = e-135 Identities = 492/572 (86%), Gaps = 15/572 (2%) Strand = Plus / Plus Query: 222 cccggcgctcgccgccgccctggccgcagcggcgccggcgaaccaccagtacgtcaccca 281 ||||||| |||| ||||| || | ||| | |||||| ||| |||||| | |||||||||| Sbjct: 285 cccggcggtcgcggccgcgctcgtcgccggggcgcccgcgcaccaccggcacgtcaccca 344 Query: 282 ctccgcggcggggcgggcgcacgcgctgctcctcgcaccgccgctcgcgctctcggcggt 341 | | ||| ||||||||||||||||| |||||||||| |||||||||| |||| ||||||| Sbjct: 345 cacggcgtcggggcgggcgcacgcggtgctcctcgcgccgccgctcgtgctcgcggcggt 404 Query: 342 ctcgctcgcgccgcagcttccggcgtcccacctcctgctcttcctccgccggctgcgatg 401 ||||| || |||||||| || |||| ||||| |||||||||||||| ||||| ||||| Sbjct: 405 ctcgcgggccccgcagctgccctcgtcgcacctgctgctcttcctccggcggctccgatg 464 Query: 402 cctccccgagcccaggatgcgcgacgagatgccgcggctggcgctccgcctgcccttccc 461 ||| |||| | | ||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 465 cctacccgggaaccggatgcgggacgagatgccgcggctggcgctgcgcctgccgttccc 524 Query: 462 cgacgaggaggcgctcgcgcgcgaggccggggaggtcgccgccgccgaggccgaggcaga 521 ||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| || Sbjct: 525 cgacgaggaggcgctcgcgcgggaggccggggaggtggccgcagcggaggccgaggccga 584 Query: 522 ggaggcggcacggagggagggtgagctcgcgcggaggacgcccaagcgggagcgcgg--- 578 |||||||| |||||||| ||||||||||||||||||||||||||| |||||||| | Sbjct: 585 ggaggcggagcggagggaaggtgagctcgcgcggaggacgcccaagagggagcgccgcgc 644 Query: 579 ------cggcggcgccgggtggacgtggaggcgccagctctggttggtcgtcctcgcgga 632 ||||||||||||||||||||||||||| |||| ||| | ||||||||||||| Sbjct: 645 ccacagcggcggcgccgggtggacgtggaggcggaagctgtggctcatcgtcctcgcgga 704 Query: 633 tctcgtgctcctctgcgtgctcttcgccgcctggctcgccgtgtgcaggggattcagctg 692 |||||||||||||| ||| |||||||| ||||||||||| ||||||| |||||||||||| Sbjct: 705 tctcgtgctcctcttcgtcctcttcgctgcctggctcgcagtgtgcaagggattcagctg 764 Query: 693 cattggccggtaaataggtaaaaaaggctgctcaagtttcaagcgaaaa----tctggag 748 ||||||||||||||||||| ||||||| |||| | |||||||| |||| | ||||| Sbjct: 765 cattggccggtaaataggt-aaaaagggtgct-aggtttcaagacaaaaaaagtgtggag 822 Query: 749 gttatttatgcagttgtttctcctgatgcatg 780 ||||||||||||| ||||||||| ||||||| Sbjct: 823 attatttatgcagtagtttctccttatgcatg 854 Score = 188 bits (95), Expect = 4e-44 Identities = 181/205 (88%), Gaps = 6/205 (2%) Strand = Plus / Plus Query: 897 tctttgaaaagcgaagcccaatggtcttgc-tagacttcataagtttgaatttgttggtt 955 |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 973 tctttgaaaaatgaagcccaatggtcttgcctagacttcataagtttgaatttgttggtt 1032 Query: 956 tgattgaggacatctgtaaaccctgtagtgtaatttttttttgttcattttctatacaaa 1015 || |||||||||||||||||||| ||||||||| |||||| |||||||| |||||| || Sbjct: 1033 tggttgaggacatctgtaaacccagtagtgtaa--ttttttcgttcatttactatac-aa 1089 Query: 1016 agaaaatgttgaaattttgccccattggtcttgttttcccc--attctggcaaggacaga 1073 || || ||||||||||||||| ||||| |||||||| |||| || || |||||||| Sbjct: 1090 agcaattgttgaaattttgcctcattgatcttgtttcccccctatgttgttcaggacaga 1149 Query: 1074 ctcagatatatctgaatcttactgt 1098 | |||||||||||||||| |||||| Sbjct: 1150 cccagatatatctgaatcctactgt 1174 Score = 131 bits (66), Expect = 7e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 114 gctgcctcggatgctcccggcctcgcacccgctgctctacgcctgcgtcttccacgacag 173 ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| Sbjct: 159 gctgcctcggatgctcccggcctcgcacccgctgctctacgcctgcgcctaccgggacag 218 Query: 174 caccctcgtcgccgagctcgcccacgcccc 203 | ||||||||||||| |||||||||||||| Sbjct: 219 cgccctcgtcgccgacctcgcccacgcccc 248 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 484 bits (244), Expect = e-133 Identities = 438/504 (86%), Gaps = 9/504 (1%) Strand = Plus / Plus Query: 222 cccggcgctcgccgccgccctggccgcagcggcgccggcgaaccaccagtacgtcaccca 281 ||||||| |||| ||||| || | ||| | |||||| ||| |||||| | |||||||||| Sbjct: 7518900 cccggcggtcgcggccgcgctcgtcgccggggcgcccgcgcaccaccggcacgtcaccca 7518959 Query: 282 ctccgcggcggggcgggcgcacgcgctgctcctcgcaccgccgctcgcgctctcggcggt 341 | | ||| ||||||||||||||||| |||||||||| |||||||||| |||| ||||||| Sbjct: 7518960 cacggcgtcggggcgggcgcacgcggtgctcctcgcgccgccgctcgtgctcgcggcggt 7519019 Query: 342 ctcgctcgcgccgcagcttccggcgtcccacctcctgctcttcctccgccggctgcgatg 401 ||||| || |||||||| || |||| ||||| |||||||||||||| ||||| ||||| Sbjct: 7519020 ctcgcgggccccgcagctgccctcgtcgcacctgctgctcttcctccggcggctccgatg 7519079 Query: 402 cctccccgagcccaggatgcgcgacgagatgccgcggctggcgctccgcctgcccttccc 461 ||| |||| | | ||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 7519080 cctacccgggaaccggatgcgggacgagatgccgcggctggcgctgcgcctgccgttccc 7519139 Query: 462 cgacgaggaggcgctcgcgcgcgaggccggggaggtcgccgccgccgaggccgaggcaga 521 ||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| || Sbjct: 7519140 cgacgaggaggcgctcgcgcgggaggccggggaggtggccgcagcggaggccgaggccga 7519199 Query: 522 ggaggcggcacggagggagggtgagctcgcgcggaggacgcccaagcgggagcgcgg--- 578 |||||||| |||||||| ||||||||||||||||||||||||||| |||||||| | Sbjct: 7519200 ggaggcggagcggagggaaggtgagctcgcgcggaggacgcccaagagggagcgccgcgc 7519259 Query: 579 ------cggcggcgccgggtggacgtggaggcgccagctctggttggtcgtcctcgcgga 632 ||||||||||||||||||||||||||| |||| ||| | ||||||||||||| Sbjct: 7519260 ccgcagcggcggcgccgggtggacgtggaggcggaagctgtggctcatcgtcctcgcgga 7519319 Query: 633 tctcgtgctcctctgcgtgctcttcgccgcctggctcgccgtgtgcaggggattcagctg 692 |||||||||||||| ||| |||||||| ||||||||||| ||||||| |||||||||||| Sbjct: 7519320 tctcgtgctcctcttcgtcctcttcgctgcctggctcgcagtgtgcaagggattcagctg 7519379 Query: 693 cattggccggtaaataggtaaaaa 716 |||||||||||||||||||||||| Sbjct: 7519380 cattggccggtaaataggtaaaaa 7519403 Score = 196 bits (99), Expect = 2e-46 Identities = 182/205 (88%), Gaps = 6/205 (2%) Strand = Plus / Plus Query: 897 tctttgaaaagcgaagcccaatggtcttgc-tagacttcataagtttgaatttgttggtt 955 |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 7523189 tctttgaaaaatgaagcccaatggtcttgcctagacttcataagtttgaatttgttggtt 7523248 Query: 956 tgattgaggacatctgtaaaccctgtagtgtaatttttttttgttcattttctatacaaa 1015 || |||||||||||||||||||| ||||||||| |||||| |||||||| |||||| || Sbjct: 7523249 tggttgaggacatctgtaaacccagtagtgtaa--ttttttcgttcatttactatac-aa 7523305 Query: 1016 agaaaatgttgaaattttgccccattggtcttgttttcccc--attctggcaaggacaga 1073 || |||||||||||||||||| ||||| |||||||| |||| || || |||||||| Sbjct: 7523306 agcaaatgttgaaattttgcctcattgatcttgtttcccccctatgttgttcaggacaga 7523365 Query: 1074 ctcagatatatctgaatcttactgt 1098 | |||||||||||||||| |||||| Sbjct: 7523366 cccagatatatctgaatcctactgt 7523390 Score = 131 bits (66), Expect = 7e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 114 gctgcctcggatgctcccggcctcgcacccgctgctctacgcctgcgtcttccacgacag 173 ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| Sbjct: 7518774 gctgcctcggatgctcccggcctcgcacccgctgctctacgcctgcgcctaccgggacag 7518833 Query: 174 caccctcgtcgccgagctcgcccacgcccc 203 | ||||||||||||| |||||||||||||| Sbjct: 7518834 cgccctcgtcgccgacctcgcccacgcccc 7518863 Score = 79.8 bits (40), Expect = 2e-11 Identities = 56/60 (93%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 647 gcgtgctcttcgccgcctggctcgcc-gtgtgcaggggattcagctgcattggccggtaa 705 |||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 7527752 gcgtcctcttcgttgcctggctcgcccgtgtgcaggggattcagctgcattggccggtaa 7527811 >dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0708G02 Length = 168976 Score = 484 bits (244), Expect = e-133 Identities = 438/504 (86%), Gaps = 9/504 (1%) Strand = Plus / Plus Query: 222 cccggcgctcgccgccgccctggccgcagcggcgccggcgaaccaccagtacgtcaccca 281 ||||||| |||| ||||| || | ||| | |||||| ||| |||||| | |||||||||| Sbjct: 67692 cccggcggtcgcggccgcgctcgtcgccggggcgcccgcgcaccaccggcacgtcaccca 67751 Query: 282 ctccgcggcggggcgggcgcacgcgctgctcctcgcaccgccgctcgcgctctcggcggt 341 | | ||| ||||||||||||||||| |||||||||| |||||||||| |||| ||||||| Sbjct: 67752 cacggcgtcggggcgggcgcacgcggtgctcctcgcgccgccgctcgtgctcgcggcggt 67811 Query: 342 ctcgctcgcgccgcagcttccggcgtcccacctcctgctcttcctccgccggctgcgatg 401 ||||| || |||||||| || |||| ||||| |||||||||||||| ||||| ||||| Sbjct: 67812 ctcgcgggccccgcagctgccctcgtcgcacctgctgctcttcctccggcggctccgatg 67871 Query: 402 cctccccgagcccaggatgcgcgacgagatgccgcggctggcgctccgcctgcccttccc 461 ||| |||| | | ||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 67872 cctacccgggaaccggatgcgggacgagatgccgcggctggcgctgcgcctgccgttccc 67931 Query: 462 cgacgaggaggcgctcgcgcgcgaggccggggaggtcgccgccgccgaggccgaggcaga 521 ||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| || Sbjct: 67932 cgacgaggaggcgctcgcgcgggaggccggggaggtggccgcagcggaggccgaggccga 67991 Query: 522 ggaggcggcacggagggagggtgagctcgcgcggaggacgcccaagcgggagcgcgg--- 578 |||||||| |||||||| ||||||||||||||||||||||||||| |||||||| | Sbjct: 67992 ggaggcggagcggagggaaggtgagctcgcgcggaggacgcccaagagggagcgccgcgc 68051 Query: 579 ------cggcggcgccgggtggacgtggaggcgccagctctggttggtcgtcctcgcgga 632 ||||||||||||||||||||||||||| |||| ||| | ||||||||||||| Sbjct: 68052 ccgcagcggcggcgccgggtggacgtggaggcggaagctgtggctcatcgtcctcgcgga 68111 Query: 633 tctcgtgctcctctgcgtgctcttcgccgcctggctcgccgtgtgcaggggattcagctg 692 |||||||||||||| ||| |||||||| ||||||||||| ||||||| |||||||||||| Sbjct: 68112 tctcgtgctcctcttcgtcctcttcgctgcctggctcgcagtgtgcaagggattcagctg 68171 Query: 693 cattggccggtaaataggtaaaaa 716 |||||||||||||||||||||||| Sbjct: 68172 cattggccggtaaataggtaaaaa 68195 Score = 196 bits (99), Expect = 2e-46 Identities = 182/205 (88%), Gaps = 6/205 (2%) Strand = Plus / Plus Query: 897 tctttgaaaagcgaagcccaatggtcttgc-tagacttcataagtttgaatttgttggtt 955 |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 71981 tctttgaaaaatgaagcccaatggtcttgcctagacttcataagtttgaatttgttggtt 72040 Query: 956 tgattgaggacatctgtaaaccctgtagtgtaatttttttttgttcattttctatacaaa 1015 || |||||||||||||||||||| ||||||||| |||||| |||||||| |||||| || Sbjct: 72041 tggttgaggacatctgtaaacccagtagtgtaa--ttttttcgttcatttactatac-aa 72097 Query: 1016 agaaaatgttgaaattttgccccattggtcttgttttcccc--attctggcaaggacaga 1073 || |||||||||||||||||| ||||| |||||||| |||| || || |||||||| Sbjct: 72098 agcaaatgttgaaattttgcctcattgatcttgtttcccccctatgttgttcaggacaga 72157 Query: 1074 ctcagatatatctgaatcttactgt 1098 | |||||||||||||||| |||||| Sbjct: 72158 cccagatatatctgaatcctactgt 72182 Score = 131 bits (66), Expect = 7e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 114 gctgcctcggatgctcccggcctcgcacccgctgctctacgcctgcgtcttccacgacag 173 ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| Sbjct: 67566 gctgcctcggatgctcccggcctcgcacccgctgctctacgcctgcgcctaccgggacag 67625 Query: 174 caccctcgtcgccgagctcgcccacgcccc 203 | ||||||||||||| |||||||||||||| Sbjct: 67626 cgccctcgtcgccgacctcgcccacgcccc 67655 Score = 79.8 bits (40), Expect = 2e-11 Identities = 56/60 (93%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 647 gcgtgctcttcgccgcctggctcgcc-gtgtgcaggggattcagctgcattggccggtaa 705 |||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76544 gcgtcctcttcgttgcctggctcgcccgtgtgcaggggattcagctgcattggccggtaa 76603