BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst037l11 (746 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001050120.1| Oryza sativa (japonica cultivar-group) Os01g... 355 2e-94 dbj|AK101407.1| Oryza sativa (japonica cultivar-group) cDNA clon... 355 2e-94 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 123 1e-24 dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic D... 123 1e-24 gb|AY112516.1| Zea mays CL66304_1 mRNA sequence 86 2e-13 >ref|NM_001050120.1| Oryza sativa (japonica cultivar-group) Os01g0617800 (Os01g0617800) mRNA, complete cds Length = 1059 Score = 355 bits (179), Expect = 2e-94 Identities = 394/466 (84%), Gaps = 6/466 (1%) Strand = Plus / Plus Query: 76 aaccgagcaaggcgctcctggacctcccctccgatcccaagccgccctctttcatcgagt 135 |||||||||||| ||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 157 aaccgagcaaggagctcctggacctcccctccgagcccaagccgccatccctcatcgagt 216 Query: 136 cgcttcttgcgggcag------agagcagcagcacaaggagggcaagcgcaaggcggggc 189 || |||| | ||| || | ||||||||||||||||||| |||||||||||||||| Sbjct: 217 cgattctcgtggggaggagagaacagcagcagcacaaggaggggaagcgcaaggcggggc 276 Query: 190 ctcccaccgatccactccccaagagccaagtgctcggaaaagtgaaggatttcttgggag 249 ||||||||||||||||||||||||||||||| || |||| |||||| ||||||||||||| Sbjct: 277 ctcccaccgatccactccccaagagccaagttctaggaagagtgaaagatttcttgggag 336 Query: 250 agattgcaaagtcgaatgagaaattgcagcttgatgcgcaaagtaagtctcctgaagagt 309 |||| |||||| |||| ||||||||||| || |||| ||| |||| ||||||||||| Sbjct: 337 agatggcaaaggcgaacgagaaattgcatctcgatgtaaaaaataagcgtcctgaagagt 396 Query: 310 atgatatagaagcgcttaccggaaacgaaaaagaatatattgagatggatttgcttctcg 369 ||||||| ||||||||||| || ||||| || |||||||||||||||||||||||||| | Sbjct: 397 atgatatcgaagcgcttacagggaacgagaaggaatatattgagatggatttgcttcttg 456 Query: 370 gctttgctgatcttcattccgagcaagctgtagaggcagctgaaatgacaatgagtggct 429 | | |||||| | ||||| ||| |||||||||| | ||||||| ||||||| |||| Sbjct: 457 gtgtagctgatttgcattcagagaaagctgtagaagtagctgaagcaacaatgaacggct 516 Query: 430 tcccaccttcaggaatgtcgttttctagcagctcatcagactcggatgatgatagcgatg 489 ||||||||||||||| ||| || || |||||||||| ||||| || |||||||| |||| Sbjct: 517 tcccaccttcaggaaggtcattcgcttgcagctcatctgactctgaagatgatagtgatg 576 Query: 490 acagtgatgaagctggtggtgatgaacgacacatgtctggcaaaga 535 ||||| |||| | ||||||||| | |||||||| ||||||| Sbjct: 577 gtagtgacgaagacagcggtgatgaaacaaacatgtctagcaaaga 622 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 541 gcaaagatccagatgaaccggaggctcatccagcgaaaggaaagaagtccaataaaagac 600 |||||||| | ||||||||||||||||| || | |||||||||||| |||||||| | | Sbjct: 616 gcaaagatgcggatgaaccggaggctcaagcatcaaaaggaaagaagcccaataaacggc 675 Query: 601 agaagattgttgttctcaattaggatccctgtcat 635 ||||||| |||||||| || |||||||| |||||| Sbjct: 676 agaagatcgttgttcttaactaggatccttgtcat 710 >dbj|AK101407.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037H17, full insert sequence Length = 1060 Score = 355 bits (179), Expect = 2e-94 Identities = 394/466 (84%), Gaps = 6/466 (1%) Strand = Plus / Plus Query: 76 aaccgagcaaggcgctcctggacctcccctccgatcccaagccgccctctttcatcgagt 135 |||||||||||| ||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 158 aaccgagcaaggagctcctggacctcccctccgagcccaagccgccatccctcatcgagt 217 Query: 136 cgcttcttgcgggcag------agagcagcagcacaaggagggcaagcgcaaggcggggc 189 || |||| | ||| || | ||||||||||||||||||| |||||||||||||||| Sbjct: 218 cgattctcgtggggaggagagaacagcagcagcacaaggaggggaagcgcaaggcggggc 277 Query: 190 ctcccaccgatccactccccaagagccaagtgctcggaaaagtgaaggatttcttgggag 249 ||||||||||||||||||||||||||||||| || |||| |||||| ||||||||||||| Sbjct: 278 ctcccaccgatccactccccaagagccaagttctaggaagagtgaaagatttcttgggag 337 Query: 250 agattgcaaagtcgaatgagaaattgcagcttgatgcgcaaagtaagtctcctgaagagt 309 |||| |||||| |||| ||||||||||| || |||| ||| |||| ||||||||||| Sbjct: 338 agatggcaaaggcgaacgagaaattgcatctcgatgtaaaaaataagcgtcctgaagagt 397 Query: 310 atgatatagaagcgcttaccggaaacgaaaaagaatatattgagatggatttgcttctcg 369 ||||||| ||||||||||| || ||||| || |||||||||||||||||||||||||| | Sbjct: 398 atgatatcgaagcgcttacagggaacgagaaggaatatattgagatggatttgcttcttg 457 Query: 370 gctttgctgatcttcattccgagcaagctgtagaggcagctgaaatgacaatgagtggct 429 | | |||||| | ||||| ||| |||||||||| | ||||||| ||||||| |||| Sbjct: 458 gtgtagctgatttgcattcagagaaagctgtagaagtagctgaagcaacaatgaacggct 517 Query: 430 tcccaccttcaggaatgtcgttttctagcagctcatcagactcggatgatgatagcgatg 489 ||||||||||||||| ||| || || |||||||||| ||||| || |||||||| |||| Sbjct: 518 tcccaccttcaggaaggtcattcgcttgcagctcatctgactctgaagatgatagtgatg 577 Query: 490 acagtgatgaagctggtggtgatgaacgacacatgtctggcaaaga 535 ||||| |||| | ||||||||| | |||||||| ||||||| Sbjct: 578 gtagtgacgaagacagcggtgatgaaacaaacatgtctagcaaaga 623 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 541 gcaaagatccagatgaaccggaggctcatccagcgaaaggaaagaagtccaataaaagac 600 |||||||| | ||||||||||||||||| || | |||||||||||| |||||||| | | Sbjct: 617 gcaaagatgcggatgaaccggaggctcaagcatcaaaaggaaagaagcccaataaacggc 676 Query: 601 agaagattgttgttctcaattaggatccctgtcat 635 ||||||| |||||||| || |||||||| |||||| Sbjct: 677 agaagatcgttgttcttaactaggatccttgtcat 711 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 123 bits (62), Expect = 1e-24 Identities = 65/66 (98%) Strand = Plus / Minus Query: 154 agcagcagcacaaggagggcaagcgcaaggcggggcctcccaccgatccactccccaaga 213 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 24567324 agcagcagcacaaggaggggaagcgcaaggcggggcctcccaccgatccactccccaaga 24567265 Query: 214 gccaag 219 |||||| Sbjct: 24567264 gccaag 24567259 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 541 gcaaagatccagatgaaccggaggctcatccagcgaaaggaaagaagtccaataaaagac 600 |||||||| | ||||||||||||||||| || | |||||||||||| |||||||| | | Sbjct: 24565555 gcaaagatgcggatgaaccggaggctcaagcatcaaaaggaaagaagcccaataaacggc 24565496 Query: 601 agaagattgttgttctcaattaggatccctgtcat 635 ||||||| |||||||| || |||||||| |||||| Sbjct: 24565495 agaagatcgttgttcttaactaggatccttgtcat 24565461 Score = 79.8 bits (40), Expect = 1e-11 Identities = 145/180 (80%) Strand = Plus / Minus Query: 356 ggatttgcttctcggctttgctgatcttcattccgagcaagctgtagaggcagctgaaat 415 |||||||||||| || | |||||| | ||||| ||| |||||||||| | ||||||| Sbjct: 24565728 ggatttgcttcttggtgtagctgatttgcattcagagaaagctgtagaagtagctgaagc 24565669 Query: 416 gacaatgagtggcttcccaccttcaggaatgtcgttttctagcagctcatcagactcgga 475 ||||||| ||||||||||||||||||| ||| || || |||||||||| ||||| || Sbjct: 24565668 aacaatgaacggcttcccaccttcaggaaggtcattcgcttgcagctcatctgactctga 24565609 Query: 476 tgatgatagcgatgacagtgatgaagctggtggtgatgaacgacacatgtctggcaaaga 535 |||||||| |||| ||||| |||| | ||||||||| | |||||||| ||||||| Sbjct: 24565608 agatgatagtgatggtagtgacgaagacagcggtgatgaaacaaacatgtctagcaaaga 24565549 Score = 77.8 bits (39), Expect = 6e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 299 tcctgaagagtatgatatagaagcgcttaccggaaacgaaaaagaatatattgagatgg 357 |||||||||||||||||| ||||||||||| || ||||| || |||||||||||||||| Sbjct: 24565873 tcctgaagagtatgatatcgaagcgcttacagggaacgagaaggaatatattgagatgg 24565815 >dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0686E09 Length = 156425 Score = 123 bits (62), Expect = 1e-24 Identities = 65/66 (98%) Strand = Plus / Minus Query: 154 agcagcagcacaaggagggcaagcgcaaggcggggcctcccaccgatccactccccaaga 213 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 147708 agcagcagcacaaggaggggaagcgcaaggcggggcctcccaccgatccactccccaaga 147649 Query: 214 gccaag 219 |||||| Sbjct: 147648 gccaag 147643 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 541 gcaaagatccagatgaaccggaggctcatccagcgaaaggaaagaagtccaataaaagac 600 |||||||| | ||||||||||||||||| || | |||||||||||| |||||||| | | Sbjct: 145939 gcaaagatgcggatgaaccggaggctcaagcatcaaaaggaaagaagcccaataaacggc 145880 Query: 601 agaagattgttgttctcaattaggatccctgtcat 635 ||||||| |||||||| || |||||||| |||||| Sbjct: 145879 agaagatcgttgttcttaactaggatccttgtcat 145845 Score = 79.8 bits (40), Expect = 1e-11 Identities = 145/180 (80%) Strand = Plus / Minus Query: 356 ggatttgcttctcggctttgctgatcttcattccgagcaagctgtagaggcagctgaaat 415 |||||||||||| || | |||||| | ||||| ||| |||||||||| | ||||||| Sbjct: 146112 ggatttgcttcttggtgtagctgatttgcattcagagaaagctgtagaagtagctgaagc 146053 Query: 416 gacaatgagtggcttcccaccttcaggaatgtcgttttctagcagctcatcagactcgga 475 ||||||| ||||||||||||||||||| ||| || || |||||||||| ||||| || Sbjct: 146052 aacaatgaacggcttcccaccttcaggaaggtcattcgcttgcagctcatctgactctga 145993 Query: 476 tgatgatagcgatgacagtgatgaagctggtggtgatgaacgacacatgtctggcaaaga 535 |||||||| |||| ||||| |||| | ||||||||| | |||||||| ||||||| Sbjct: 145992 agatgatagtgatggtagtgacgaagacagcggtgatgaaacaaacatgtctagcaaaga 145933 Score = 77.8 bits (39), Expect = 6e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 299 tcctgaagagtatgatatagaagcgcttaccggaaacgaaaaagaatatattgagatgg 357 |||||||||||||||||| ||||||||||| || ||||| || |||||||||||||||| Sbjct: 146257 tcctgaagagtatgatatcgaagcgcttacagggaacgagaaggaatatattgagatgg 146199 >gb|AY112516.1| Zea mays CL66304_1 mRNA sequence Length = 481 Score = 85.7 bits (43), Expect = 2e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 569 tccagcgaaaggaaagaagtccaataaaagacagaagattgttgttctcaa 619 ||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 256 tccagcgaaaggaaagaagcccaataaaagacagaaaattgttgttctcaa 206