BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst037j20 (1238 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome... 262 3e-66 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 262 3e-66 emb|CT834418.1| Oryza sativa (indica cultivar-group) cDNA clone:... 260 1e-65 ref|NM_001070132.1| Oryza sativa (japonica cultivar-group) Os09g... 234 7e-58 dbj|AK073194.1| Oryza sativa (japonica cultivar-group) cDNA clon... 234 7e-58 >gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBb0004A05, complete sequence Length = 157913 Score = 262 bits (132), Expect = 3e-66 Identities = 192/212 (90%) Strand = Plus / Plus Query: 504 ttgaggcttgttggctgatcaaaccatgcaggttcttggcagaaagagggccattggttc 563 ||||||||||| ||||| |||||| |||||||||||||||||||||||| ||||||||| Sbjct: 146408 ttgaggcttgtcagctgaccaaaccgtgcaggttcttggcagaaagaggggcattggttc 146467 Query: 564 ttcttgatgatgaggaagaaacaataggaatggaggatatctatgaaaagattgctggag 623 |||||||| | |||| |||||||| ||||||||||| ||||| | |||||||||||||| Sbjct: 146468 ttcttgattacgagggtgaaacaattggaatggaggaaatctacggaaagattgctggag 146527 Query: 624 gaaattatgggtgctcctgggacgccttccaagcttacaagcacttgaagttgcttggat 683 | || ||||||||||||||||| |||||||||||||||||||||||||||||||| || | Sbjct: 146528 ggaaatatgggtgctcctgggatgccttccaagcttacaagcacttgaagttgctcggct 146587 Query: 684 atattattggacgatatggtgttccctagaca 715 ||||||||||||||||||| ||||||| |||| Sbjct: 146588 atattattggacgatatggcgttccctggaca 146619 Score = 115 bits (58), Expect = 4e-22 Identities = 123/142 (86%), Gaps = 2/142 (1%) Strand = Plus / Plus Query: 796 tggtgcctgcaatgacataaccaaattgctcaaagaaatgcacatagacgggatatatcc 855 |||||||| |||||||||||| ||||||||||| |||||| |||||| | || |||| Sbjct: 146706 tggtgcctccaatgacataactaaattgctcaaggaaatgtgcatagatgatatgcatcc 146765 Query: 856 atcctttgaagtgtatctaccaaacagcaaatttaa-aggtcatccccaggagtccctag 914 ||||||||||||||||||||| || ||||||||||| | | |||||||||||| |||||| Sbjct: 146766 atcctttgaagtgtatctaccgaatagcaaatttaagaagacatccccaggagaccctag 146825 Query: 915 -ttcctcctatgcctgttaagg 935 ||| |||||||||| |||||| Sbjct: 146826 tttcgtcctatgcctattaagg 146847 Score = 105 bits (53), Expect = 4e-19 Identities = 134/161 (83%) Strand = Plus / Plus Query: 173 caggaaggtggcgtcgcgtgtgcgttggatggagtaggtcggtgcagcggaggtggtgga 232 |||||||||||||||||| | | ||| ||||| ||| ||||| |||||||| ||||| Sbjct: 146095 caggaaggtggcgtcgcgcgcggtgtggctggaggaggctggtgcggcggaggttgtgga 146154 Query: 233 tagtaaacgaatgctctggttgaccaccagtgtcacccggagcggcaagctgtattacaa 292 || || | | ||||||| |||||||| |||||| |||| |||||||||||| ||||| Sbjct: 146155 cagcaagggcaagctctggctgaccaccggtgtcaaccgggacggcaagctgtactacaa 146214 Query: 293 tgtcgaggagatcgggaacgccacttgttcgattaaatgcc 333 |||||||||||| ||| ||||||| |||||||| ||||||| Sbjct: 146215 tgtcgaggagattgggtacgccacctgttcgatgaaatgcc 146255 Score = 99.6 bits (50), Expect = 3e-17 Identities = 102/118 (86%), Gaps = 1/118 (0%) Strand = Plus / Plus Query: 972 gaaaacaagtttgaggacattcctctaaaattgtgtcatgttgataatggacgggtcagt 1031 |||||||||||||||| ||||||||| ||||| || |||||||| || ||||||||||| Sbjct: 147540 gaaaacaagtttgagggcattcctctgaaattttgccatgttgacaacggacgggtcagc 147599 Query: 1032 tttctctccgtcgacaaagctacacttcctagtttgccctgatg-gataggagcagga 1088 || |||||| | |||||||| | || ||||||||||||||||| ||||| ||||||| Sbjct: 147600 ttcctctcctccaacaaagctgctctccctagtttgccctgatgagatagcagcagga 147657 >dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 262 bits (132), Expect = 3e-66 Identities = 192/212 (90%) Strand = Plus / Plus Query: 504 ttgaggcttgttggctgatcaaaccatgcaggttcttggcagaaagagggccattggttc 563 ||||||||||| ||||| |||||| |||||||||||||||||||||||| ||||||||| Sbjct: 19212758 ttgaggcttgtcagctgaccaaaccgtgcaggttcttggcagaaagaggggcattggttc 19212817 Query: 564 ttcttgatgatgaggaagaaacaataggaatggaggatatctatgaaaagattgctggag 623 |||||||| | |||| |||||||| ||||||||||| ||||| | |||||||||||||| Sbjct: 19212818 ttcttgattacgagggtgaaacaattggaatggaggaaatctacggaaagattgctggag 19212877 Query: 624 gaaattatgggtgctcctgggacgccttccaagcttacaagcacttgaagttgcttggat 683 | || ||||||||||||||||| |||||||||||||||||||||||||||||||| || | Sbjct: 19212878 ggaaatatgggtgctcctgggatgccttccaagcttacaagcacttgaagttgctcggct 19212937 Query: 684 atattattggacgatatggtgttccctagaca 715 ||||||||||||||||||| ||||||| |||| Sbjct: 19212938 atattattggacgatatggcgttccctggaca 19212969 Score = 115 bits (58), Expect = 4e-22 Identities = 123/142 (86%), Gaps = 2/142 (1%) Strand = Plus / Plus Query: 796 tggtgcctgcaatgacataaccaaattgctcaaagaaatgcacatagacgggatatatcc 855 |||||||| |||||||||||| ||||||||||| |||||| |||||| | || |||| Sbjct: 19213056 tggtgcctccaatgacataactaaattgctcaaggaaatgtgcatagatgatatgcatcc 19213115 Query: 856 atcctttgaagtgtatctaccaaacagcaaatttaa-aggtcatccccaggagtccctag 914 ||||||||||||||||||||| || ||||||||||| | | |||||||||||| |||||| Sbjct: 19213116 atcctttgaagtgtatctaccgaatagcaaatttaagaagacatccccaggagaccctag 19213175 Query: 915 -ttcctcctatgcctgttaagg 935 ||| |||||||||| |||||| Sbjct: 19213176 tttcgtcctatgcctattaagg 19213197 Score = 105 bits (53), Expect = 4e-19 Identities = 134/161 (83%) Strand = Plus / Plus Query: 173 caggaaggtggcgtcgcgtgtgcgttggatggagtaggtcggtgcagcggaggtggtgga 232 |||||||||||||||||| | | ||| ||||| ||| ||||| |||||||| ||||| Sbjct: 19212445 caggaaggtggcgtcgcgcgcggtgtggctggaggaggctggtgcggcggaggttgtgga 19212504 Query: 233 tagtaaacgaatgctctggttgaccaccagtgtcacccggagcggcaagctgtattacaa 292 || || | | ||||||| |||||||| |||||| |||| |||||||||||| ||||| Sbjct: 19212505 cagcaagggcaagctctggctgaccaccggtgtcaaccgggacggcaagctgtactacaa 19212564 Query: 293 tgtcgaggagatcgggaacgccacttgttcgattaaatgcc 333 |||||||||||| ||| ||||||| |||||||| ||||||| Sbjct: 19212565 tgtcgaggagattgggtacgccacctgttcgatgaaatgcc 19212605 Score = 99.6 bits (50), Expect = 3e-17 Identities = 102/118 (86%), Gaps = 1/118 (0%) Strand = Plus / Plus Query: 972 gaaaacaagtttgaggacattcctctaaaattgtgtcatgttgataatggacgggtcagt 1031 |||||||||||||||| ||||||||| ||||| || |||||||| || ||||||||||| Sbjct: 19213890 gaaaacaagtttgagggcattcctctgaaattttgccatgttgacaacggacgggtcagc 19213949 Query: 1032 tttctctccgtcgacaaagctacacttcctagtttgccctgatg-gataggagcagga 1088 || |||||| | |||||||| | || ||||||||||||||||| ||||| ||||||| Sbjct: 19213950 ttcctctcctccaacaaagctgctctccctagtttgccctgatgagatagcagcagga 19214007 >emb|CT834418.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA111M19, full insert sequence Length = 1078 Score = 260 bits (131), Expect = 1e-65 Identities = 188/207 (90%) Strand = Plus / Minus Query: 504 ttgaggcttgttggctgatcaaaccatgcaggttcttggcagaaagagggccattggttc 563 ||||||||||| ||||| ||| || |||||||||||||||||||||||| ||||||||| Sbjct: 256 ttgaggcttgtcagctgaccaacccgtgcaggttcttggcagaaagaggggcattggttc 197 Query: 564 ttcttgatgatgaggaagaaacaataggaatggaggatatctatgaaaagattgctggag 623 |||||||| |||||| |||||||| ||||||||||| ||||| | |||||||||||||| Sbjct: 196 ttcttgattatgagggtgaaacaattggaatggaggaaatctacggaaagattgctggag 137 Query: 624 gaaattatgggtgctcctgggacgccttccaagcttacaagcacttgaagttgcttggat 683 | || ||||||||||||||||| |||||||||||||||||||||||||||||||| || | Sbjct: 136 ggaagtatgggtgctcctgggatgccttccaagcttacaagcacttgaagttgctcggct 77 Query: 684 atattattggacgatatggtgttccct 710 ||||||||||||||||||| ||||||| Sbjct: 76 atattattggacgatatggcgttccct 50 Score = 103 bits (52), Expect = 2e-18 Identities = 133/160 (83%) Strand = Plus / Minus Query: 173 caggaaggtggcgtcgcgtgtgcgttggatggagtaggtcggtgcagcggaggtggtgga 232 |||||||||||||||||| | | ||| ||||| ||| ||||| |||||||| ||||| Sbjct: 567 caggaaggtggcgtcgcgcgcggtgtgggtggaggaggctggtgcggcggaggttgtgga 508 Query: 233 tagtaaacgaatgctctggttgaccaccagtgtcacccggagcggcaagctgtattacaa 292 || || | | ||||||| |||||||| |||||| |||| |||||||||||| ||||| Sbjct: 507 cagcaagggcaagctctggctgaccaccggtgtcaaccgggacggcaagctgtactacaa 448 Query: 293 tgtcgaggagatcgggaacgccacttgttcgattaaatgc 332 |||||||||||| ||| ||||||| |||||||| |||||| Sbjct: 447 tgtcgaggagattgggtacgccacctgttcgatgaaatgc 408 >ref|NM_001070132.1| Oryza sativa (japonica cultivar-group) Os09g0504800 (Os09g0504800) mRNA, complete cds Length = 1028 Score = 234 bits (118), Expect = 7e-58 Identities = 166/182 (91%) Strand = Plus / Plus Query: 534 ggttcttggcagaaagagggccattggttcttcttgatgatgaggaagaaacaataggaa 593 |||||||||||||||||||| ||||||||||||||||| | |||| |||||||| |||| Sbjct: 315 ggttcttggcagaaagaggggcattggttcttcttgattacgagggtgaaacaattggaa 374 Query: 594 tggaggatatctatgaaaagattgctggaggaaattatgggtgctcctgggacgccttcc 653 ||||||| ||||| | ||||||||||||||| || ||||||||||||||||| ||||||| Sbjct: 375 tggaggaaatctacggaaagattgctggagggaaatatgggtgctcctgggatgccttcc 434 Query: 654 aagcttacaagcacttgaagttgcttggatatattattggacgatatggtgttccctaga 713 ||||||||||||||||||||||||| || |||||||||||||||||||| ||||||| || Sbjct: 435 aagcttacaagcacttgaagttgctcggctatattattggacgatatggcgttccctgga 494 Query: 714 ca 715 || Sbjct: 495 ca 496 Score = 190 bits (96), Expect = 9e-45 Identities = 249/296 (84%), Gaps = 3/296 (1%) Strand = Plus / Plus Query: 796 tggtgcctgcaatgacataaccaaattgctcaaagaaatgcacatagacgggatatatcc 855 |||||||| |||||||||||| ||||||||||| |||||| |||||| | || |||| Sbjct: 583 tggtgcctccaatgacataactaaattgctcaaggaaatgtgcatagatgatatgcatcc 642 Query: 856 atcctttgaagtgtatctaccaaacagcaaatttaa-aggtcatccccaggagtccctag 914 ||||||||||||||||||||| || ||||||||||| | | |||||||||||| |||||| Sbjct: 643 atcctttgaagtgtatctaccgaatagcaaatttaagaagacatccccaggagaccctag 702 Query: 915 ttcc-tcctatgcctgttaagggataagccgccctcaagggatgaattggaaacaataga 973 || | |||||||||| ||||| | || || || |||||||| ||| | ||||| | || Sbjct: 703 tttcgtcctatgcctattaagcaacaaaccaccatcaagggaagaactagaaaccgttga 762 Query: 974 aaacaagtttgaggacattcctctaaaattgtgtcatgttgataatggacgggtcagttt 1033 |||||||||||||| ||||||||| ||||| || |||||||| || ||||||||||| || Sbjct: 763 aaacaagtttgagggcattcctctgaaattttgccatgttgacaacggacgggtcagctt 822 Query: 1034 tctctccgtcgacaaagctacacttcctagtttgccctgatg-gataggagcagga 1088 |||||| | |||||||| | || ||||||||||||||||| ||||| ||||||| Sbjct: 823 cctctcctccaacaaagctgctctccctagtttgccctgatgagatagcagcagga 878 Score = 107 bits (54), Expect = 1e-19 Identities = 123/146 (84%) Strand = Plus / Plus Query: 159 tcgagagtccagttcaggaaggtggcgtcgcgtgtgcgttggatggagtaggtcggtgca 218 |||||||||||||||||||||||||||||||| | | ||| ||||| ||| ||||| Sbjct: 167 tcgagagtccagttcaggaaggtggcgtcgcgcgcggtgtggctggaggaggctggtgcg 226 Query: 219 gcggaggtggtggatagtaaacgaatgctctggttgaccaccagtgtcacccggagcggc 278 |||||||| ||||| || || | | ||||||| |||||||| |||||| |||| |||| Sbjct: 227 gcggaggttgtggacagcaagggcaagctctggctgaccaccggtgtcaaccgggacggc 286 Query: 279 aagctgtattacaatgtcgaggagat 304 |||||||| ||||||||||||||||| Sbjct: 287 aagctgtactacaatgtcgaggagat 312 >dbj|AK073194.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023G15, full insert sequence Length = 1030 Score = 234 bits (118), Expect = 7e-58 Identities = 166/182 (91%) Strand = Plus / Plus Query: 534 ggttcttggcagaaagagggccattggttcttcttgatgatgaggaagaaacaataggaa 593 |||||||||||||||||||| ||||||||||||||||| | |||| |||||||| |||| Sbjct: 317 ggttcttggcagaaagaggggcattggttcttcttgattacgagggtgaaacaattggaa 376 Query: 594 tggaggatatctatgaaaagattgctggaggaaattatgggtgctcctgggacgccttcc 653 ||||||| ||||| | ||||||||||||||| || ||||||||||||||||| ||||||| Sbjct: 377 tggaggaaatctacggaaagattgctggagggaaatatgggtgctcctgggatgccttcc 436 Query: 654 aagcttacaagcacttgaagttgcttggatatattattggacgatatggtgttccctaga 713 ||||||||||||||||||||||||| || |||||||||||||||||||| ||||||| || Sbjct: 437 aagcttacaagcacttgaagttgctcggctatattattggacgatatggcgttccctgga 496 Query: 714 ca 715 || Sbjct: 497 ca 498 Score = 190 bits (96), Expect = 9e-45 Identities = 249/296 (84%), Gaps = 3/296 (1%) Strand = Plus / Plus Query: 796 tggtgcctgcaatgacataaccaaattgctcaaagaaatgcacatagacgggatatatcc 855 |||||||| |||||||||||| ||||||||||| |||||| |||||| | || |||| Sbjct: 585 tggtgcctccaatgacataactaaattgctcaaggaaatgtgcatagatgatatgcatcc 644 Query: 856 atcctttgaagtgtatctaccaaacagcaaatttaa-aggtcatccccaggagtccctag 914 ||||||||||||||||||||| || ||||||||||| | | |||||||||||| |||||| Sbjct: 645 atcctttgaagtgtatctaccgaatagcaaatttaagaagacatccccaggagaccctag 704 Query: 915 ttcc-tcctatgcctgttaagggataagccgccctcaagggatgaattggaaacaataga 973 || | |||||||||| ||||| | || || || |||||||| ||| | ||||| | || Sbjct: 705 tttcgtcctatgcctattaagcaacaaaccaccatcaagggaagaactagaaaccgttga 764 Query: 974 aaacaagtttgaggacattcctctaaaattgtgtcatgttgataatggacgggtcagttt 1033 |||||||||||||| ||||||||| ||||| || |||||||| || ||||||||||| || Sbjct: 765 aaacaagtttgagggcattcctctgaaattttgccatgttgacaacggacgggtcagctt 824 Query: 1034 tctctccgtcgacaaagctacacttcctagtttgccctgatg-gataggagcagga 1088 |||||| | |||||||| | || ||||||||||||||||| ||||| ||||||| Sbjct: 825 cctctcctccaacaaagctgctctccctagtttgccctgatgagatagcagcagga 880 Score = 107 bits (54), Expect = 1e-19 Identities = 123/146 (84%) Strand = Plus / Plus Query: 159 tcgagagtccagttcaggaaggtggcgtcgcgtgtgcgttggatggagtaggtcggtgca 218 |||||||||||||||||||||||||||||||| | | ||| ||||| ||| ||||| Sbjct: 169 tcgagagtccagttcaggaaggtggcgtcgcgcgcggtgtggctggaggaggctggtgcg 228 Query: 219 gcggaggtggtggatagtaaacgaatgctctggttgaccaccagtgtcacccggagcggc 278 |||||||| ||||| || || | | ||||||| |||||||| |||||| |||| |||| Sbjct: 229 gcggaggttgtggacagcaagggcaagctctggctgaccaccggtgtcaaccgggacggc 288 Query: 279 aagctgtattacaatgtcgaggagat 304 |||||||| ||||||||||||||||| Sbjct: 289 aagctgtactacaatgtcgaggagat 314