BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst037i24 (1002 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001074575.1| Oryza sativa (japonica cultivar-group) Os11g... 228 3e-56 gb|AC108223.5| Oryza sativa (japonica cultivar-group) chromosome... 228 3e-56 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 228 3e-56 ref|NM_001073302.1| Oryza sativa (japonica cultivar-group) Os12g... 139 2e-29 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 139 2e-29 >ref|NM_001074575.1| Oryza sativa (japonica cultivar-group) Os11g0543300 (Os11g0543300) mRNA, complete cds Length = 1509 Score = 228 bits (115), Expect = 3e-56 Identities = 279/333 (83%), Gaps = 3/333 (0%) Strand = Plus / Minus Query: 310 cgccgccgcgccactcgccgccgaggtccaggtacgcgctctccagctgctccgccgcgt 369 ||||||||||||| ||||||||||||| ||||| ||| ||| || | || || || Sbjct: 379 cgccgccgcgccagccgccgccgaggtcgaggtaggcggcctcgaggcggtcggcgacgg 320 Query: 370 cctccacggcggcgacaaactcgtcgagcggccgccccgcgcggcggagcaggtgccgca 429 |||| ||||||||||| || ||| | ||||| ||| ||||||||||||| ||||| |||| Sbjct: 319 cctcgacggcggcgacgaagtcggccagcgggcgcgccgcgcggcggaggaggtggcgca 260 Query: 430 gcgcccggcgcttgtgctcctccatcggcagcaggctggggtcgccgtggtggaagggcc 489 | || |||||||||||||||||||| || ||| | ||||||||||||||||||||| | Sbjct: 259 gggcgcggcgcttgtgctcctccatgggggccagcccggggtcgccgtggtggaaggggc 200 Query: 490 ccagcgacaccacctgcggctggtacgccttgctgttgaggtccttgatgcacgccggca 549 | ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | Sbjct: 199 cgagcgacaccacctgcggctggtaggccttcggcttgaggtccttgatgcacgccggga 140 Query: 550 cgcggtagatgcagtgtcgctgccaccgcgacacctccaccgacgcgtcg---gcttcct 606 |||||||||||||||| || ||||||||||| ||||| ||| ||||||| || || | Sbjct: 139 cgcggtagatgcagtggggccgccaccgcgacgcctccgccgccgcgtcgggcgcgtcgt 80 Query: 607 tgagcgtcttctccacgtccaccacccacgtcc 639 |||||| ||||||| |||||||||||||||| Sbjct: 79 gcagcgtcctctccacctccaccacccacgtcc 47 Score = 123 bits (62), Expect = 1e-24 Identities = 74/78 (94%) Strand = Plus / Minus Query: 95 gagcctctcgagcacgagcagcggcagctggttctcgagcatgagcatgtctcgccggat 154 ||||||||| ||||| ||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 651 gagcctctccagcaccagcagcggcagctggttctcgagcatgagcatgtcgcggcggat 592 Query: 155 gtacggcaccatgtacag 172 |||||||||||||||||| Sbjct: 591 gtacggcaccatgtacag 574 Score = 81.8 bits (41), Expect = 5e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 258 aggaagcacccgtccacgatcatcatctccaggaaccgctccctggcctcggcgccg 314 ||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||||| Sbjct: 443 aggaagcacccgtccacgatcatcatctccaagaacctctccctcgcctcgccgccg 387 >gb|AC108223.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019A16, complete sequence Length = 175425 Score = 228 bits (115), Expect = 3e-56 Identities = 279/333 (83%), Gaps = 3/333 (0%) Strand = Plus / Minus Query: 310 cgccgccgcgccactcgccgccgaggtccaggtacgcgctctccagctgctccgccgcgt 369 ||||||||||||| ||||||||||||| ||||| ||| ||| || | || || || Sbjct: 114908 cgccgccgcgccagccgccgccgaggtcgaggtaggcggcctcgaggcggtcggcgacgg 114849 Query: 370 cctccacggcggcgacaaactcgtcgagcggccgccccgcgcggcggagcaggtgccgca 429 |||| ||||||||||| || ||| | ||||| ||| ||||||||||||| ||||| |||| Sbjct: 114848 cctcgacggcggcgacgaagtcggccagcgggcgcgccgcgcggcggaggaggtggcgca 114789 Query: 430 gcgcccggcgcttgtgctcctccatcggcagcaggctggggtcgccgtggtggaagggcc 489 | || |||||||||||||||||||| || ||| | ||||||||||||||||||||| | Sbjct: 114788 gggcgcggcgcttgtgctcctccatgggggccagcccggggtcgccgtggtggaaggggc 114729 Query: 490 ccagcgacaccacctgcggctggtacgccttgctgttgaggtccttgatgcacgccggca 549 | ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | Sbjct: 114728 cgagcgacaccacctgcggctggtaggccttcggcttgaggtccttgatgcacgccggga 114669 Query: 550 cgcggtagatgcagtgtcgctgccaccgcgacacctccaccgacgcgtcg---gcttcct 606 |||||||||||||||| || ||||||||||| ||||| ||| ||||||| || || | Sbjct: 114668 cgcggtagatgcagtggggccgccaccgcgacgcctccgccgccgcgtcgggcgcgtcgt 114609 Query: 607 tgagcgtcttctccacgtccaccacccacgtcc 639 |||||| ||||||| |||||||||||||||| Sbjct: 114608 gcagcgtcctctccacctccaccacccacgtcc 114576 Score = 123 bits (62), Expect = 1e-24 Identities = 74/78 (94%) Strand = Plus / Minus Query: 95 gagcctctcgagcacgagcagcggcagctggttctcgagcatgagcatgtctcgccggat 154 ||||||||| ||||| ||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 115180 gagcctctccagcaccagcagcggcagctggttctcgagcatgagcatgtcgcggcggat 115121 Query: 155 gtacggcaccatgtacag 172 |||||||||||||||||| Sbjct: 115120 gtacggcaccatgtacag 115103 Score = 81.8 bits (41), Expect = 5e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 258 aggaagcacccgtccacgatcatcatctccaggaaccgctccctggcctcggcgccg 314 ||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||||| Sbjct: 114972 aggaagcacccgtccacgatcatcatctccaagaacctctccctcgcctcgccgccg 114916 >dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 228 bits (115), Expect = 3e-56 Identities = 279/333 (83%), Gaps = 3/333 (0%) Strand = Plus / Minus Query: 310 cgccgccgcgccactcgccgccgaggtccaggtacgcgctctccagctgctccgccgcgt 369 ||||||||||||| ||||||||||||| ||||| ||| ||| || | || || || Sbjct: 19246120 cgccgccgcgccagccgccgccgaggtcgaggtaggcggcctcgaggcggtcggcgacgg 19246061 Query: 370 cctccacggcggcgacaaactcgtcgagcggccgccccgcgcggcggagcaggtgccgca 429 |||| ||||||||||| || ||| | ||||| ||| ||||||||||||| ||||| |||| Sbjct: 19246060 cctcgacggcggcgacgaagtcggccagcgggcgcgccgcgcggcggaggaggtggcgca 19246001 Query: 430 gcgcccggcgcttgtgctcctccatcggcagcaggctggggtcgccgtggtggaagggcc 489 | || |||||||||||||||||||| || ||| | ||||||||||||||||||||| | Sbjct: 19246000 gggcgcggcgcttgtgctcctccatgggggccagcccggggtcgccgtggtggaaggggc 19245941 Query: 490 ccagcgacaccacctgcggctggtacgccttgctgttgaggtccttgatgcacgccggca 549 | ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | Sbjct: 19245940 cgagcgacaccacctgcggctggtaggccttcggcttgaggtccttgatgcacgccggga 19245881 Query: 550 cgcggtagatgcagtgtcgctgccaccgcgacacctccaccgacgcgtcg---gcttcct 606 |||||||||||||||| || ||||||||||| ||||| ||| ||||||| || || | Sbjct: 19245880 cgcggtagatgcagtggggccgccaccgcgacgcctccgccgccgcgtcgggcgcgtcgt 19245821 Query: 607 tgagcgtcttctccacgtccaccacccacgtcc 639 |||||| ||||||| |||||||||||||||| Sbjct: 19245820 gcagcgtcctctccacctccaccacccacgtcc 19245788 Score = 123 bits (62), Expect = 1e-24 Identities = 74/78 (94%) Strand = Plus / Minus Query: 95 gagcctctcgagcacgagcagcggcagctggttctcgagcatgagcatgtctcgccggat 154 ||||||||| ||||| ||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 19246392 gagcctctccagcaccagcagcggcagctggttctcgagcatgagcatgtcgcggcggat 19246333 Query: 155 gtacggcaccatgtacag 172 |||||||||||||||||| Sbjct: 19246332 gtacggcaccatgtacag 19246315 Score = 81.8 bits (41), Expect = 5e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 258 aggaagcacccgtccacgatcatcatctccaggaaccgctccctggcctcggcgccg 314 ||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||||| Sbjct: 19246184 aggaagcacccgtccacgatcatcatctccaagaacctctccctcgcctcgccgccg 19246128 >ref|NM_001073302.1| Oryza sativa (japonica cultivar-group) Os12g0481000 (Os12g0481000) mRNA, complete cds Length = 1380 Score = 139 bits (70), Expect = 2e-29 Identities = 124/142 (87%) Strand = Plus / Minus Query: 435 cggcgcttgtgctcctccatcggcagcaggctggggtcgccgtggtggaagggccccagc 494 ||||||||||| |||||||| || || ||| | |||||||||||||||||||| || || Sbjct: 254 cggcgcttgtggtcctccatggggaggaggttcgggtcgccgtggtggaaggggccgagg 195 Query: 495 gacaccacctgcggctggtacgccttgctgttgaggtccttgatgcacgccggcacgcgg 554 |||||||||||||||||||| || || |||||||||||||||||||||||| |||||| Sbjct: 194 gacaccacctgcggctggtaggcgcggcggttgaggtccttgatgcacgccgggacgcgg 135 Query: 555 tagatgcagtgtcgctgccacc 576 |||||| |||| ||| |||||| Sbjct: 134 tagatggagtggcgccgccacc 113 Score = 97.6 bits (49), Expect = 8e-17 Identities = 115/137 (83%) Strand = Plus / Minus Query: 79 cgctctcgacggcgacgagcctctcgagcacgagcagcggcagctggttctcgagcatga 138 |||||||||||||||||||| | ||||| ||||| || |||||||||||||||| ||||| Sbjct: 625 cgctctcgacggcgacgagcttgtcgaggacgaggaggggcagctggttctcgatcatga 566 Query: 139 gcatgtctcgccggatgtacggcaccatgtacagtatcccgtgggggctgaagatggggt 198 |||||| || |||||||| ||||| |||| || | |||||||| |||||| | |||| Sbjct: 565 tcatgtcgcggcggatgtagggcacggtgtagagcagcccgtgggcgctgaacaccgggt 506 Query: 199 cgttgggggcgtagtcg 215 ||| | |||||||||| Sbjct: 505 cgtcgtcggcgtagtcg 489 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 139 bits (70), Expect = 2e-29 Identities = 124/142 (87%) Strand = Plus / Plus Query: 435 cggcgcttgtgctcctccatcggcagcaggctggggtcgccgtggtggaagggccccagc 494 ||||||||||| |||||||| || || ||| | |||||||||||||||||||| || || Sbjct: 17723303 cggcgcttgtggtcctccatggggaggaggttcgggtcgccgtggtggaaggggccgagg 17723362 Query: 495 gacaccacctgcggctggtacgccttgctgttgaggtccttgatgcacgccggcacgcgg 554 |||||||||||||||||||| || || |||||||||||||||||||||||| |||||| Sbjct: 17723363 gacaccacctgcggctggtaggcgcggcggttgaggtccttgatgcacgccgggacgcgg 17723422 Query: 555 tagatgcagtgtcgctgccacc 576 |||||| |||| ||| |||||| Sbjct: 17723423 tagatggagtggcgccgccacc 17723444 Score = 97.6 bits (49), Expect = 8e-17 Identities = 115/137 (83%) Strand = Plus / Plus Query: 79 cgctctcgacggcgacgagcctctcgagcacgagcagcggcagctggttctcgagcatga 138 |||||||||||||||||||| | ||||| ||||| || |||||||||||||||| ||||| Sbjct: 17722932 cgctctcgacggcgacgagcttgtcgaggacgaggaggggcagctggttctcgatcatga 17722991 Query: 139 gcatgtctcgccggatgtacggcaccatgtacagtatcccgtgggggctgaagatggggt 198 |||||| || |||||||| ||||| |||| || | |||||||| |||||| | |||| Sbjct: 17722992 tcatgtcgcggcggatgtagggcacggtgtagagcagcccgtgggcgctgaacaccgggt 17723051 Query: 199 cgttgggggcgtagtcg 215 ||| | |||||||||| Sbjct: 17723052 cgtcgtcggcgtagtcg 17723068 Score = 83.8 bits (42), Expect = 1e-12 Identities = 78/90 (86%) Strand = Plus / Minus Query: 82 tctcgacggcgacgagcctctcgagcacgagcagcggcagctggttctcgagcatgagca 141 ||||||||||||||||| ||| ||| | ||| || |||||||||||||| | ||||||| Sbjct: 17710054 tctcgacggcgacgagcttctggaggaggaggagaggcagctggttctccacgatgagca 17709995 Query: 142 tgtctcgccggatgtacggcaccatgtaca 171 |||| || |||| ||||||||||||||||| Sbjct: 17709994 tgtcgcggcggacgtacggcaccatgtaca 17709965