BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst037i11 (923 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 172 2e-39 dbj|AP003340.3| Oryza sativa (japonica cultivar-group) genomic D... 172 2e-39 dbj|AP003792.4| Oryza sativa (japonica cultivar-group) genomic D... 172 2e-39 dbj|AP003053.1| Oryza sativa (japonica cultivar-group) genomic D... 172 2e-39 gb|AY596612.1| Saccharum officinarum clone SCCCCL4009E01, comple... 96 3e-16 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 172 bits (87), Expect = 2e-39 Identities = 165/191 (86%) Strand = Plus / Minus Query: 624 actcacggtgattgaagaagaaattttggcaatgacactcggagtgaagctccgaacctt 683 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 26193809 actcacggtgattgtagaagaaattttggcaatgacactcggagtgaagctgcgaatctt 26193750 Query: 684 ctcaaagggaaccccagagaaaagaggtaggttgtaatcattgcccccaatttctccaac 743 || || ||||| || |||||||||||||||||||||||||||||||||||| || Sbjct: 26193749 tgtaatggacaccccgctgagaagaggtaggttgtaatcattgcccccaatttctccgac 26193690 Query: 744 caagaagagagtttggttcatcatgcccgtgcaagctgtgtaataaacagggttatgaat 803 || ||| |||| ||| ||||||||||| |||||| ||||| ||||| || ||| |||| Sbjct: 26193689 caggaaaagagattgattcatcatgcctgtgcaacctgtgcaataactagtgtttagaat 26193630 Query: 804 cagtatgtaaa 814 ||||||||||| Sbjct: 26193629 cagtatgtaaa 26193619 Score = 121 bits (61), Expect = 5e-24 Identities = 142/169 (84%) Strand = Plus / Minus Query: 624 actcacggtgattgaagaagaaattttggcaatgacactcggagtgaagctccgaacctt 683 |||||||||||||| |||||||||||||||||| ||||| ||||||||||| |||| ||| Sbjct: 26199641 actcacggtgattgtagaagaaattttggcaataacactaggagtgaagctgcgaatctt 26199582 Query: 684 ctcaaagggaaccccagagaaaagaggtaggttgtaatcattgcccccaatttctccaac 743 |||| ||| || || | |||||| ||||||||||||||| || |||||||| || Sbjct: 26199581 ttcaatgggcacgccgctcataagaggatagttgtaatcattgcctccgatttctccgac 26199522 Query: 744 caagaagagagtttggttcatcatgcccgtgcaagctgtgtaataaaca 792 ||| ||||||| ||| |||||||||||| ||||| ||||| ||||||| Sbjct: 26199521 caaaaagagagattgattcatcatgcccttgcaacctgtgccataaaca 26199473 Score = 113 bits (57), Expect = 1e-21 Identities = 141/169 (83%) Strand = Plus / Minus Query: 624 actcacggtgattgaagaagaaattttggcaatgacactcggagtgaagctccgaacctt 683 ||||||||||||| ||||||||||||||||||||||| ||||||||| | |||| ||| Sbjct: 26217253 actcacggtgattatggaagaaattttggcaatgacactaggagtgaagttgcgaatctt 26217194 Query: 684 ctcaaagggaaccccagagaaaagaggtaggttgtaatcattgcccccaatttctccaac 743 |||| || | || | |||||| ||||||||||||||||| || ||||||||||| Sbjct: 26217193 ttcaatggacatgccgctcataagaggaaggttgtaatcattgcctccgatttctccaac 26217134 Query: 744 caagaagagagtttggttcatcatgcccgtgcaagctgtgtaataaaca 792 |||||| |||| ||| |||||||||||| ||||| ||||| ||||||| Sbjct: 26217133 caagaaaagagattgattcatcatgcccttgcaacctgtgcgataaaca 26217085 Score = 111 bits (56), Expect = 5e-21 Identities = 148/176 (84%), Gaps = 2/176 (1%) Strand = Plus / Minus Query: 624 actcacggtgattgaagaagaaattttggcaatgacactcggagtgaagctccgaacctt 683 |||||| ||||||| ||||||||||||||||||| ||||||||||||||| |||| ||| Sbjct: 26265545 actcacagtgattgtggaagaaattttggcaatgatactcggagtgaagctgcgaatctt 26265486 Query: 684 ctcaaaggga-accccagagaaaagaggtaggttgtaatcattgcccccaatttctccaa 742 || || ||| ||||| | |||||| |||||||||||||||| ||||||||||| | Sbjct: 26265485 -tctaatggataccccgcccataagaggatggttgtaatcattgccaccaatttctccga 26265427 Query: 743 ccaagaagagagtttggttcatcatgcccgtgcaagctgtgtaataaacagggtta 798 | |||||||||| ||| ||||||||| | ||||| ||||| |||||||| ||||| Sbjct: 26265426 ctaagaagagagattgattcatcatgtcgttgcaatctgtgaaataaacatggtta 26265371 Score = 105 bits (53), Expect = 3e-19 Identities = 142/169 (84%), Gaps = 2/169 (1%) Strand = Plus / Minus Query: 631 gtgattgaagaagaaattttggcaatgacactcggagtgaagctccgaaccttctcaaag 690 ||||||| |||||||||| |||||||||||||||||||||||| |||| ||| || || Sbjct: 26228220 gtgattgtggaagaaatttcggcaatgacactcggagtgaagctgcgaatctt-tctaat 26228162 Query: 691 gga-accccagagaaaagaggtaggttgtaatcattgcccccaatttctccaaccaagaa 749 ||| |||||| ||| |||||| |||||||||| ||||| ||||||||||| || ||||| Sbjct: 26228161 ggataccccacagataagaggatggttgtaatcgttgccaccaatttctccgactaagaa 26228102 Query: 750 gagagtttggttcatcatgcccgtgcaagctgtgtaataaacagggtta 798 |||| ||| ||||||||| | ||||| ||||| ||||||| ||||| Sbjct: 26228101 cagagattgattcatcatgtcgttgcaatctgtgatataaacatggtta 26228053 >dbj|AP003340.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1316_H05 Length = 105346 Score = 172 bits (87), Expect = 2e-39 Identities = 165/191 (86%) Strand = Plus / Minus Query: 624 actcacggtgattgaagaagaaattttggcaatgacactcggagtgaagctccgaacctt 683 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 99226 actcacggtgattgtagaagaaattttggcaatgacactcggagtgaagctgcgaatctt 99167 Query: 684 ctcaaagggaaccccagagaaaagaggtaggttgtaatcattgcccccaatttctccaac 743 || || ||||| || |||||||||||||||||||||||||||||||||||| || Sbjct: 99166 tgtaatggacaccccgctgagaagaggtaggttgtaatcattgcccccaatttctccgac 99107 Query: 744 caagaagagagtttggttcatcatgcccgtgcaagctgtgtaataaacagggttatgaat 803 || ||| |||| ||| ||||||||||| |||||| ||||| ||||| || ||| |||| Sbjct: 99106 caggaaaagagattgattcatcatgcctgtgcaacctgtgcaataactagtgtttagaat 99047 Query: 804 cagtatgtaaa 814 ||||||||||| Sbjct: 99046 cagtatgtaaa 99036 Score = 121 bits (61), Expect = 5e-24 Identities = 142/169 (84%) Strand = Plus / Minus Query: 624 actcacggtgattgaagaagaaattttggcaatgacactcggagtgaagctccgaacctt 683 |||||||||||||| |||||||||||||||||| ||||| ||||||||||| |||| ||| Sbjct: 105058 actcacggtgattgtagaagaaattttggcaataacactaggagtgaagctgcgaatctt 104999 Query: 684 ctcaaagggaaccccagagaaaagaggtaggttgtaatcattgcccccaatttctccaac 743 |||| ||| || || | |||||| ||||||||||||||| || |||||||| || Sbjct: 104998 ttcaatgggcacgccgctcataagaggatagttgtaatcattgcctccgatttctccgac 104939 Query: 744 caagaagagagtttggttcatcatgcccgtgcaagctgtgtaataaaca 792 ||| ||||||| ||| |||||||||||| ||||| ||||| ||||||| Sbjct: 104938 caaaaagagagattgattcatcatgcccttgcaacctgtgccataaaca 104890 >dbj|AP003792.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1159_D09 Length = 147770 Score = 172 bits (87), Expect = 2e-39 Identities = 165/191 (86%) Strand = Plus / Minus Query: 624 actcacggtgattgaagaagaaattttggcaatgacactcggagtgaagctccgaacctt 683 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 6040 actcacggtgattgtagaagaaattttggcaatgacactcggagtgaagctgcgaatctt 5981 Query: 684 ctcaaagggaaccccagagaaaagaggtaggttgtaatcattgcccccaatttctccaac 743 || || ||||| || |||||||||||||||||||||||||||||||||||| || Sbjct: 5980 tgtaatggacaccccgctgagaagaggtaggttgtaatcattgcccccaatttctccgac 5921 Query: 744 caagaagagagtttggttcatcatgcccgtgcaagctgtgtaataaacagggttatgaat 803 || ||| |||| ||| ||||||||||| |||||| ||||| ||||| || ||| |||| Sbjct: 5920 caggaaaagagattgattcatcatgcctgtgcaacctgtgcaataactagtgtttagaat 5861 Query: 804 cagtatgtaaa 814 ||||||||||| Sbjct: 5860 cagtatgtaaa 5850 Score = 121 bits (61), Expect = 5e-24 Identities = 142/169 (84%) Strand = Plus / Minus Query: 624 actcacggtgattgaagaagaaattttggcaatgacactcggagtgaagctccgaacctt 683 |||||||||||||| |||||||||||||||||| ||||| ||||||||||| |||| ||| Sbjct: 11872 actcacggtgattgtagaagaaattttggcaataacactaggagtgaagctgcgaatctt 11813 Query: 684 ctcaaagggaaccccagagaaaagaggtaggttgtaatcattgcccccaatttctccaac 743 |||| ||| || || | |||||| ||||||||||||||| || |||||||| || Sbjct: 11812 ttcaatgggcacgccgctcataagaggatagttgtaatcattgcctccgatttctccgac 11753 Query: 744 caagaagagagtttggttcatcatgcccgtgcaagctgtgtaataaaca 792 ||| ||||||| ||| |||||||||||| ||||| ||||| ||||||| Sbjct: 11752 caaaaagagagattgattcatcatgcccttgcaacctgtgccataaaca 11704 Score = 113 bits (57), Expect = 1e-21 Identities = 141/169 (83%) Strand = Plus / Minus Query: 624 actcacggtgattgaagaagaaattttggcaatgacactcggagtgaagctccgaacctt 683 ||||||||||||| ||||||||||||||||||||||| ||||||||| | |||| ||| Sbjct: 29934 actcacggtgattatggaagaaattttggcaatgacactaggagtgaagttgcgaatctt 29875 Query: 684 ctcaaagggaaccccagagaaaagaggtaggttgtaatcattgcccccaatttctccaac 743 |||| || | || | |||||| ||||||||||||||||| || ||||||||||| Sbjct: 29874 ttcaatggacatgccgctcataagaggaaggttgtaatcattgcctccgatttctccaac 29815 Query: 744 caagaagagagtttggttcatcatgcccgtgcaagctgtgtaataaaca 792 |||||| |||| ||| |||||||||||| ||||| ||||| ||||||| Sbjct: 29814 caagaaaagagattgattcatcatgcccttgcaacctgtgcgataaaca 29766 Score = 111 bits (56), Expect = 5e-21 Identities = 148/176 (84%), Gaps = 2/176 (1%) Strand = Plus / Minus Query: 624 actcacggtgattgaagaagaaattttggcaatgacactcggagtgaagctccgaacctt 683 |||||| ||||||| ||||||||||||||||||| ||||||||||||||| |||| ||| Sbjct: 78226 actcacagtgattgtggaagaaattttggcaatgatactcggagtgaagctgcgaatctt 78167 Query: 684 ctcaaaggga-accccagagaaaagaggtaggttgtaatcattgcccccaatttctccaa 742 || || ||| ||||| | |||||| |||||||||||||||| ||||||||||| | Sbjct: 78166 -tctaatggataccccgcccataagaggatggttgtaatcattgccaccaatttctccga 78108 Query: 743 ccaagaagagagtttggttcatcatgcccgtgcaagctgtgtaataaacagggtta 798 | |||||||||| ||| ||||||||| | ||||| ||||| |||||||| ||||| Sbjct: 78107 ctaagaagagagattgattcatcatgtcgttgcaatctgtgaaataaacatggtta 78052 Score = 105 bits (53), Expect = 3e-19 Identities = 142/169 (84%), Gaps = 2/169 (1%) Strand = Plus / Minus Query: 631 gtgattgaagaagaaattttggcaatgacactcggagtgaagctccgaaccttctcaaag 690 ||||||| |||||||||| |||||||||||||||||||||||| |||| ||| || || Sbjct: 40901 gtgattgtggaagaaatttcggcaatgacactcggagtgaagctgcgaatctt-tctaat 40843 Query: 691 gga-accccagagaaaagaggtaggttgtaatcattgcccccaatttctccaaccaagaa 749 ||| |||||| ||| |||||| |||||||||| ||||| ||||||||||| || ||||| Sbjct: 40842 ggataccccacagataagaggatggttgtaatcgttgccaccaatttctccgactaagaa 40783 Query: 750 gagagtttggttcatcatgcccgtgcaagctgtgtaataaacagggtta 798 |||| ||| ||||||||| | ||||| ||||| ||||||| ||||| Sbjct: 40782 cagagattgattcatcatgtcgttgcaatctgtgatataaacatggtta 40734 >dbj|AP003053.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0047B08 Length = 57846 Score = 172 bits (87), Expect = 2e-39 Identities = 165/191 (86%) Strand = Plus / Minus Query: 624 actcacggtgattgaagaagaaattttggcaatgacactcggagtgaagctccgaacctt 683 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 34939 actcacggtgattgtagaagaaattttggcaatgacactcggagtgaagctgcgaatctt 34880 Query: 684 ctcaaagggaaccccagagaaaagaggtaggttgtaatcattgcccccaatttctccaac 743 || || ||||| || |||||||||||||||||||||||||||||||||||| || Sbjct: 34879 tgtaatggacaccccgctgagaagaggtaggttgtaatcattgcccccaatttctccgac 34820 Query: 744 caagaagagagtttggttcatcatgcccgtgcaagctgtgtaataaacagggttatgaat 803 || ||| |||| ||| ||||||||||| |||||| ||||| ||||| || ||| |||| Sbjct: 34819 caggaaaagagattgattcatcatgcctgtgcaacctgtgcaataactagtgtttagaat 34760 Query: 804 cagtatgtaaa 814 ||||||||||| Sbjct: 34759 cagtatgtaaa 34749 Score = 121 bits (61), Expect = 5e-24 Identities = 142/169 (84%) Strand = Plus / Minus Query: 624 actcacggtgattgaagaagaaattttggcaatgacactcggagtgaagctccgaacctt 683 |||||||||||||| |||||||||||||||||| ||||| ||||||||||| |||| ||| Sbjct: 40771 actcacggtgattgtagaagaaattttggcaataacactaggagtgaagctgcgaatctt 40712 Query: 684 ctcaaagggaaccccagagaaaagaggtaggttgtaatcattgcccccaatttctccaac 743 |||| ||| || || | |||||| ||||||||||||||| || |||||||| || Sbjct: 40711 ttcaatgggcacgccgctcataagaggatagttgtaatcattgcctccgatttctccgac 40652 Query: 744 caagaagagagtttggttcatcatgcccgtgcaagctgtgtaataaaca 792 ||| ||||||| ||| |||||||||||| ||||| ||||| ||||||| Sbjct: 40651 caaaaagagagattgattcatcatgcccttgcaacctgtgccataaaca 40603 >gb|AY596612.1| Saccharum officinarum clone SCCCCL4009E01, complete sequence Length = 2352 Score = 95.6 bits (48), Expect = 3e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 507 gatatcagagggggtgaatcacatgaaggacttaattgagttcggccacaagaacaagct 566 |||||| |||| ||||||||||||||||||||| ||||||||| ||||||||||||| || Sbjct: 1350 gatatcggaggtggtgaatcacatgaaggacttgattgagttcagccacaagaacaatct 1291 Query: 567 tggtccta 574 |||||||| Sbjct: 1290 tggtccta 1283