BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst036f11 (1211 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001048798.1| Oryza sativa (japonica cultivar-group) Os01g... 170 8e-39 dbj|AK100314.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 8e-39 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 163 2e-36 dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic D... 163 2e-36 ref|NM_001061368.1| Oryza sativa (japonica cultivar-group) Os05g... 101 6e-18 >ref|NM_001048798.1| Oryza sativa (japonica cultivar-group) Os01g0190300 (Os01g0190300) mRNA, complete cds Length = 1790 Score = 170 bits (86), Expect = 8e-39 Identities = 122/134 (91%) Strand = Plus / Plus Query: 524 gagaagggcatgttcgtcaagatcaacatggacggcgtcccaatcgggaggaaagtagac 583 ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || ||| Sbjct: 975 gagaagggcatgttcgtgaagatcaacatggacggcgtcccgatcgggaggaaggtcgac 1034 Query: 584 ctcaaggcgtacggtggctacgccgagctctccgccgccgtcgacaatctcttccgcgcc 643 ||| ||||||||| ||||||||| |||||||||||||||||||||| |||||||||| | Sbjct: 1035 ctcgcggcgtacggcggctacgcccagctctccgccgccgtcgacaagctcttccgcggc 1094 Query: 644 ctgctcgccgctca 657 || || |||||||| Sbjct: 1095 ctcctagccgctca 1108 Score = 151 bits (76), Expect = 8e-33 Identities = 115/128 (89%) Strand = Plus / Plus Query: 707 atggacggcagcagcgagtacactctggtctacgaggacgacgagggcgacaggatgctg 766 |||| |||| || |||||||||| || |||||||||||||||||||||||| ||||||| Sbjct: 1155 atggtcggcggcggcgagtacacgctcgtctacgaggacgacgagggcgaccggatgctc 1214 Query: 767 gtcggagacgtcccatgggagatgttcatcgccaccgcgaagaggctgcgagtgctcaag 826 ||||| ||||| || ||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1215 gtcggcgacgttccctggcagatgttcatcgccaccgcgaagaggctgcgcgtgctcaag 1274 Query: 827 agttccga 834 || ||||| Sbjct: 1275 agctccga 1282 Score = 85.7 bits (43), Expect = 4e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 238 ggcggcaggggagagcggcctcgagctcagccttggcctccccgcatacttctcc 292 |||||| ||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 674 ggcggcgggggagagcggcctcgagctctgccttggcctccccgcctacttctcc 728 >dbj|AK100314.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078N13, full insert sequence Length = 1795 Score = 170 bits (86), Expect = 8e-39 Identities = 122/134 (91%) Strand = Plus / Plus Query: 524 gagaagggcatgttcgtcaagatcaacatggacggcgtcccaatcgggaggaaagtagac 583 ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || ||| Sbjct: 978 gagaagggcatgttcgtgaagatcaacatggacggcgtcccgatcgggaggaaggtcgac 1037 Query: 584 ctcaaggcgtacggtggctacgccgagctctccgccgccgtcgacaatctcttccgcgcc 643 ||| ||||||||| ||||||||| |||||||||||||||||||||| |||||||||| | Sbjct: 1038 ctcgcggcgtacggcggctacgcccagctctccgccgccgtcgacaagctcttccgcggc 1097 Query: 644 ctgctcgccgctca 657 || || |||||||| Sbjct: 1098 ctcctagccgctca 1111 Score = 151 bits (76), Expect = 8e-33 Identities = 115/128 (89%) Strand = Plus / Plus Query: 707 atggacggcagcagcgagtacactctggtctacgaggacgacgagggcgacaggatgctg 766 |||| |||| || |||||||||| || |||||||||||||||||||||||| ||||||| Sbjct: 1158 atggtcggcggcggcgagtacacgctcgtctacgaggacgacgagggcgaccggatgctc 1217 Query: 767 gtcggagacgtcccatgggagatgttcatcgccaccgcgaagaggctgcgagtgctcaag 826 ||||| ||||| || ||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1218 gtcggcgacgttccctggcagatgttcatcgccaccgcgaagaggctgcgcgtgctcaag 1277 Query: 827 agttccga 834 || ||||| Sbjct: 1278 agctccga 1285 Score = 85.7 bits (43), Expect = 4e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 238 ggcggcaggggagagcggcctcgagctcagccttggcctccccgcatacttctcc 292 |||||| ||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 677 ggcggcgggggagagcggcctcgagctctgccttggcctccccgcctacttctcc 731 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 163 bits (82), Expect = 2e-36 Identities = 109/118 (92%) Strand = Plus / Plus Query: 524 gagaagggcatgttcgtcaagatcaacatggacggcgtcccaatcgggaggaaagtagac 583 ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || ||| Sbjct: 4816894 gagaagggcatgttcgtgaagatcaacatggacggcgtcccgatcgggaggaaggtcgac 4816953 Query: 584 ctcaaggcgtacggtggctacgccgagctctccgccgccgtcgacaatctcttccgcg 641 ||| ||||||||| ||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 4816954 ctcgcggcgtacggcggctacgcccagctctccgccgccgtcgacaagctcttccgcg 4817011 Score = 85.7 bits (43), Expect = 4e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 238 ggcggcaggggagagcggcctcgagctcagccttggcctccccgcatacttctcc 292 |||||| ||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 4816504 ggcggcgggggagagcggcctcgagctctgccttggcctccccgcctacttctcc 4816558 Score = 79.8 bits (40), Expect = 2e-11 Identities = 46/48 (95%) Strand = Plus / Plus Query: 787 gatgttcatcgccaccgcgaagaggctgcgagtgctcaagagttccga 834 |||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 4817331 gatgttcatcgccaccgcgaagaggctgcgcgtgctcaagagctccga 4817378 Score = 79.8 bits (40), Expect = 2e-11 Identities = 46/48 (95%) Strand = Plus / Plus Query: 245 ggggagagcggcctcgagctcagccttggcctccccgcatacttctcc 292 |||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 6368884 ggggagagtggcctcgagctcagccttggcctccccgcctacttctcc 6368931 Score = 77.8 bits (39), Expect = 9e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 707 atggacggcagcagcgagtacactctggtctacgaggacgacgagggcgacaggatgctg 766 |||| |||| || |||||||||| || |||||||||||||||||||||||| ||||||| Sbjct: 4817171 atggtcggcggcggcgagtacacgctcgtctacgaggacgacgagggcgaccggatgctc 4817230 Query: 767 gtcggagacgt 777 ||||| ||||| Sbjct: 4817231 gtcggcgacgt 4817241 >dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 163 bits (82), Expect = 2e-36 Identities = 109/118 (92%) Strand = Plus / Plus Query: 524 gagaagggcatgttcgtcaagatcaacatggacggcgtcccaatcgggaggaaagtagac 583 ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || ||| Sbjct: 61543 gagaagggcatgttcgtgaagatcaacatggacggcgtcccgatcgggaggaaggtcgac 61602 Query: 584 ctcaaggcgtacggtggctacgccgagctctccgccgccgtcgacaatctcttccgcg 641 ||| ||||||||| ||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 61603 ctcgcggcgtacggcggctacgcccagctctccgccgccgtcgacaagctcttccgcg 61660 Score = 85.7 bits (43), Expect = 4e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 238 ggcggcaggggagagcggcctcgagctcagccttggcctccccgcatacttctcc 292 |||||| ||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 61153 ggcggcgggggagagcggcctcgagctctgccttggcctccccgcctacttctcc 61207 Score = 79.8 bits (40), Expect = 2e-11 Identities = 46/48 (95%) Strand = Plus / Plus Query: 787 gatgttcatcgccaccgcgaagaggctgcgagtgctcaagagttccga 834 |||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 61980 gatgttcatcgccaccgcgaagaggctgcgcgtgctcaagagctccga 62027 Score = 77.8 bits (39), Expect = 9e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 707 atggacggcagcagcgagtacactctggtctacgaggacgacgagggcgacaggatgctg 766 |||| |||| || |||||||||| || |||||||||||||||||||||||| ||||||| Sbjct: 61820 atggtcggcggcggcgagtacacgctcgtctacgaggacgacgagggcgaccggatgctc 61879 Query: 767 gtcggagacgt 777 ||||| ||||| Sbjct: 61880 gtcggcgacgt 61890 >ref|NM_001061368.1| Oryza sativa (japonica cultivar-group) Os05g0186900 (Os05g0186900) mRNA, partial cds Length = 1494 Score = 101 bits (51), Expect = 6e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 535 gttcgtcaagatcaacatggacggcgtcccaatcgggaggaaagtagacctcaaggcgta 594 |||||||||| | ||||||||||||||||| ||||| |||| || ||||| |||| | Sbjct: 583 gttcgtcaaggtgaacatggacggcgtcccgatcggccggaaggtcgacctggcggcgca 642 Query: 595 cggtggctacgccgagctctccgccgccgtcgacaatctcttccgcgccctgctcgccg 653 ||| ||||||| |||||||||||||||||||||| ||||||||||| ||| ||||||| Sbjct: 643 cggcggctacggcgagctctccgccgccgtcgaccgtctcttccgcggcctcctcgccg 701 Score = 81.8 bits (41), Expect = 6e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 712 cggcagcagcgagtacactctggtctacgaggacgacgagggcgacaggatgctggtcgg 771 ||||||| |||||||||| || |||||||||||||||||||||||| |||||| ||||| Sbjct: 895 cggcagcggcgagtacacgctcgtctacgaggacgacgagggcgaccagatgctcgtcgg 954 Query: 772 agacgtcccatgg 784 ||||| |||||| Sbjct: 955 cgacgtgccatgg 967