BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst035k20 (1107 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001054066.1| Oryza sativa (japonica cultivar-group) Os02g... 254 7e-64 dbj|AK106548.1| Oryza sativa (japonica cultivar-group) cDNA clon... 254 7e-64 dbj|AK103830.1| Oryza sativa (japonica cultivar-group) cDNA clon... 254 7e-64 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 125 4e-25 dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic D... 125 4e-25 >ref|NM_001054066.1| Oryza sativa (japonica cultivar-group) Os02g0638000 (Os02g0638000) mRNA, complete cds Length = 1289 Score = 254 bits (128), Expect = 7e-64 Identities = 282/332 (84%), Gaps = 1/332 (0%) Strand = Plus / Plus Query: 48 cccaattcgccattgccctccctgatgcaggcgtccgcgcgcctctcctccgccgccgca 107 |||||| |||||||||| |||| |||||| |||||||||||||||| | ||||||||||| Sbjct: 83 cccaatccgccattgcc-tccccgatgcaagcgtccgcgcgcctctacaccgccgccgca 141 Query: 108 tccagaagggtgattgcgggcgtctctagcacgatcacacggtcgtgctaccggacattc 167 |||| ||||||||||||||||||||||||||||| | || |||||| ||||||| | | Sbjct: 142 tccaagcgggtgattgcgggcgtctctagcacgatctcgcgctcgtgccaccggacttgc 201 Query: 168 cgagggaaggcacatgcggcgccgctgtcggctcaggagccacccaaggagcagaagagg 227 ||| ||||| ||||||| ||||||||||| ||||||||| | ||||| | || |||||| Sbjct: 202 cgatggaagtcacatgccgcgccgctgtccgctcaggaggcgcccaaagggccaaagagg 261 Query: 228 attacaaaggaggagaggaggattaggatagaggaatttgttgacaagtataaggcatcg 287 || || ||| ||||||||||| ||| |||||| |||||||||| |||||||||||||| Sbjct: 262 atgaccaagcaggagaggagggttaaaatagagaaatttgttgaggagtataaggcatcg 321 Query: 288 aatgatggtaaatttccaactatcaaaactgtccgtcgacatgttggagggtcccactac 347 |||||||||||||| || || || | ||||| |||| ||||||||||||| |||||| Sbjct: 322 aatgatggtaaattccccacgatgacgactgttcgtcaacatgttggagggggtcactac 381 Query: 348 accgtgagggagatgcttcaagaactggagta 379 || ||||||||||| |||| ||||| ||||| Sbjct: 382 acggtgagggagatagttcaggaacttgagta 413 Score = 87.7 bits (44), Expect = 9e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 937 cgaagacaagtcttttagggagcttgaaatcttttgcttatgggatcaggaacttctgga 996 |||||||| ||||||| |||||| ||||||||||||||| ||||||||| || || |||| Sbjct: 977 cgaagacaggtctttttgggagcctgaaatcttttgcttctgggatcagaaatttttgga 1036 Query: 997 aaaaactgtaaatgtcttgttttggctggaag 1028 |||||||| ||| ||||||| || ||||||| Sbjct: 1037 gaaaactgtgaatttcttgttatgtctggaag 1068 >dbj|AK106548.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-F09, full insert sequence Length = 1289 Score = 254 bits (128), Expect = 7e-64 Identities = 282/332 (84%), Gaps = 1/332 (0%) Strand = Plus / Plus Query: 48 cccaattcgccattgccctccctgatgcaggcgtccgcgcgcctctcctccgccgccgca 107 |||||| |||||||||| |||| |||||| |||||||||||||||| | ||||||||||| Sbjct: 83 cccaatccgccattgcc-tccccgatgcaagcgtccgcgcgcctctacaccgccgccgca 141 Query: 108 tccagaagggtgattgcgggcgtctctagcacgatcacacggtcgtgctaccggacattc 167 |||| ||||||||||||||||||||||||||||| | || |||||| ||||||| | | Sbjct: 142 tccaagcgggtgattgcgggcgtctctagcacgatctcgcgctcgtgccaccggacttgc 201 Query: 168 cgagggaaggcacatgcggcgccgctgtcggctcaggagccacccaaggagcagaagagg 227 ||| ||||| ||||||| ||||||||||| ||||||||| | ||||| | || |||||| Sbjct: 202 cgatggaagtcacatgccgcgccgctgtccgctcaggaggcgcccaaagggccaaagagg 261 Query: 228 attacaaaggaggagaggaggattaggatagaggaatttgttgacaagtataaggcatcg 287 || || ||| ||||||||||| ||| |||||| |||||||||| |||||||||||||| Sbjct: 262 atgaccaagcaggagaggagggttaaaatagagaaatttgttgaggagtataaggcatcg 321 Query: 288 aatgatggtaaatttccaactatcaaaactgtccgtcgacatgttggagggtcccactac 347 |||||||||||||| || || || | ||||| |||| ||||||||||||| |||||| Sbjct: 322 aatgatggtaaattccccacgatgacgactgttcgtcaacatgttggagggggtcactac 381 Query: 348 accgtgagggagatgcttcaagaactggagta 379 || ||||||||||| |||| ||||| ||||| Sbjct: 382 acggtgagggagatagttcaggaacttgagta 413 Score = 87.7 bits (44), Expect = 9e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 937 cgaagacaagtcttttagggagcttgaaatcttttgcttatgggatcaggaacttctgga 996 |||||||| ||||||| |||||| ||||||||||||||| ||||||||| || || |||| Sbjct: 977 cgaagacaggtctttttgggagcctgaaatcttttgcttctgggatcagaaatttttgga 1036 Query: 997 aaaaactgtaaatgtcttgttttggctggaag 1028 |||||||| ||| ||||||| || ||||||| Sbjct: 1037 gaaaactgtgaatttcttgttatgtctggaag 1068 >dbj|AK103830.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148A15, full insert sequence Length = 1279 Score = 254 bits (128), Expect = 7e-64 Identities = 282/332 (84%), Gaps = 1/332 (0%) Strand = Plus / Plus Query: 48 cccaattcgccattgccctccctgatgcaggcgtccgcgcgcctctcctccgccgccgca 107 |||||| |||||||||| |||| |||||| |||||||||||||||| | ||||||||||| Sbjct: 84 cccaatccgccattgcc-tccccgatgcaagcgtccgcgcgcctctacaccgccgccgca 142 Query: 108 tccagaagggtgattgcgggcgtctctagcacgatcacacggtcgtgctaccggacattc 167 |||| ||||||||||||||||||||||||||||| | || |||||| ||||||| | | Sbjct: 143 tccaagcgggtgattgcgggcgtctctagcacgatctcgcgctcgtgccaccggacttgc 202 Query: 168 cgagggaaggcacatgcggcgccgctgtcggctcaggagccacccaaggagcagaagagg 227 ||| ||||| ||||||| ||||||||||| ||||||||| | ||||| | || |||||| Sbjct: 203 cgatggaagtcacatgccgcgccgctgtccgctcaggaggcgcccaaagggccaaagagg 262 Query: 228 attacaaaggaggagaggaggattaggatagaggaatttgttgacaagtataaggcatcg 287 || || ||| ||||||||||| ||| |||||| |||||||||| |||||||||||||| Sbjct: 263 atgaccaagcaggagaggagggttaaaatagagaaatttgttgaggagtataaggcatcg 322 Query: 288 aatgatggtaaatttccaactatcaaaactgtccgtcgacatgttggagggtcccactac 347 |||||||||||||| || || || | ||||| |||| ||||||||||||| |||||| Sbjct: 323 aatgatggtaaattccccacgatgacgactgttcgtcaacatgttggagggggtcactac 382 Query: 348 accgtgagggagatgcttcaagaactggagta 379 || ||||||||||| |||| ||||| ||||| Sbjct: 383 acggtgagggagatagttcaggaacttgagta 414 Score = 87.7 bits (44), Expect = 9e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 937 cgaagacaagtcttttagggagcttgaaatcttttgcttatgggatcaggaacttctgga 996 |||||||| ||||||| |||||| ||||||||||||||| ||||||||| || || |||| Sbjct: 978 cgaagacaggtctttttgggagcctgaaatcttttgcttctgggatcagaaatttttgga 1037 Query: 997 aaaaactgtaaatgtcttgttttggctggaag 1028 |||||||| ||| ||||||| || ||||||| Sbjct: 1038 gaaaactgtgaatttcttgttatgtctggaag 1069 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 125 bits (63), Expect = 4e-25 Identities = 132/155 (85%) Strand = Plus / Minus Query: 117 gtgattgcgggcgtctctagcacgatcacacggtcgtgctaccggacattccgagggaag 176 ||||||||||||||||||||||||||| | || |||||| ||||||| | |||| ||||| Sbjct: 25600333 gtgattgcgggcgtctctagcacgatctcgcgctcgtgccaccggacttgccgatggaag 25600274 Query: 177 gcacatgcggcgccgctgtcggctcaggagccacccaaggagcagaagaggattacaaag 236 ||||||| ||||||||||| ||||||||| | ||||| | || |||||||| || ||| Sbjct: 25600273 tcacatgccgcgccgctgtccgctcaggaggcgcccaaagggccaaagaggatgaccaag 25600214 Query: 237 gaggagaggaggattaggatagaggaatttgttga 271 ||||||||||| ||| |||||| |||||||||| Sbjct: 25600213 caggagaggagggttaaaatagagaaatttgttga 25600179 Score = 87.7 bits (44), Expect = 9e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 937 cgaagacaagtcttttagggagcttgaaatcttttgcttatgggatcaggaacttctgga 996 |||||||| ||||||| |||||| ||||||||||||||| ||||||||| || || |||| Sbjct: 25598260 cgaagacaggtctttttgggagcctgaaatcttttgcttctgggatcagaaatttttgga 25598201 Query: 997 aaaaactgtaaatgtcttgttttggctggaag 1028 |||||||| ||| ||||||| || ||||||| Sbjct: 25598200 gaaaactgtgaatttcttgttatgtctggaag 25598169 Score = 81.8 bits (41), Expect = 5e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 275 gtataaggcatcgaatgatggtaaatttccaactatcaaaactgtccgtcgacatgttgg 334 ||||||||||||||||||||||||||| || || || | ||||| |||| ||||||||| Sbjct: 25599753 gtataaggcatcgaatgatggtaaattccccacgatgacgactgttcgtcaacatgttgg 25599694 Query: 335 agggtcccactacaccgtgagggagatgcttcaagaactggagta 379 |||| |||||||| ||||||||||| |||| ||||| ||||| Sbjct: 25599693 agggggtcactacacggtgagggagatagttcaggaacttgagta 25599649 >dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014E22 Length = 157627 Score = 125 bits (63), Expect = 4e-25 Identities = 132/155 (85%) Strand = Plus / Minus Query: 117 gtgattgcgggcgtctctagcacgatcacacggtcgtgctaccggacattccgagggaag 176 ||||||||||||||||||||||||||| | || |||||| ||||||| | |||| ||||| Sbjct: 70380 gtgattgcgggcgtctctagcacgatctcgcgctcgtgccaccggacttgccgatggaag 70321 Query: 177 gcacatgcggcgccgctgtcggctcaggagccacccaaggagcagaagaggattacaaag 236 ||||||| ||||||||||| ||||||||| | ||||| | || |||||||| || ||| Sbjct: 70320 tcacatgccgcgccgctgtccgctcaggaggcgcccaaagggccaaagaggatgaccaag 70261 Query: 237 gaggagaggaggattaggatagaggaatttgttga 271 ||||||||||| ||| |||||| |||||||||| Sbjct: 70260 caggagaggagggttaaaatagagaaatttgttga 70226 Score = 87.7 bits (44), Expect = 9e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 937 cgaagacaagtcttttagggagcttgaaatcttttgcttatgggatcaggaacttctgga 996 |||||||| ||||||| |||||| ||||||||||||||| ||||||||| || || |||| Sbjct: 68307 cgaagacaggtctttttgggagcctgaaatcttttgcttctgggatcagaaatttttgga 68248 Query: 997 aaaaactgtaaatgtcttgttttggctggaag 1028 |||||||| ||| ||||||| || ||||||| Sbjct: 68247 gaaaactgtgaatttcttgttatgtctggaag 68216 Score = 81.8 bits (41), Expect = 5e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 275 gtataaggcatcgaatgatggtaaatttccaactatcaaaactgtccgtcgacatgttgg 334 ||||||||||||||||||||||||||| || || || | ||||| |||| ||||||||| Sbjct: 69800 gtataaggcatcgaatgatggtaaattccccacgatgacgactgttcgtcaacatgttgg 69741 Query: 335 agggtcccactacaccgtgagggagatgcttcaagaactggagta 379 |||| |||||||| ||||||||||| |||| ||||| ||||| Sbjct: 69740 agggggtcactacacggtgagggagatagttcaggaacttgagta 69696