BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst035j08 (1341 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001057175.1| Oryza sativa (japonica cultivar-group) Os03g... 706 0.0 ref|NM_001073669.1| Oryza sativa (japonica cultivar-group) Os12g... 176 2e-40 dbj|AK110937.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 2e-40 gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genom... 174 6e-40 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 174 6e-40 >ref|NM_001057175.1| Oryza sativa (japonica cultivar-group) Os03g0607600 (Os03g0607600) mRNA, complete cds Length = 1122 Score = 706 bits (356), Expect = 0.0 Identities = 583/658 (88%), Gaps = 3/658 (0%) Strand = Plus / Plus Query: 391 cgtctccgacacgctctacctcaccgtctcctacatcgaccgattcctctccgccaacgc 450 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 465 cgtctccgacacgctctacctcaccgtctcctacatcgaccgcttcctctccgccaaatc 524 Query: 451 catcaaccgccagaagctccagctgctcgccgtctccgccatgctcattgcctccaagta 510 |||||||||||||||||| ||||| |||| |||||||||||||||||| ||||| ||||| Sbjct: 525 catcaaccgccagaagctgcagctcctcggcgtctccgccatgctcatcgcctcgaagta 584 Query: 511 tgaggagatcagccccccaaacgtggaggacttctgctacatcaccgacaacacctacat 570 ||||||||||||||||||||| |||||||| |||||||| || |||||||| ||||| || Sbjct: 585 tgaggagatcagccccccaaatgtggaggatttctgctatataaccgacaatacctatat 644 Query: 571 gaagcaggaggttgttaagatggagagtgatatactaaatcttctcaagtttgagatggg 630 ||| ||||||||||| ||||||||| | |||||||| ||| ||||||||||||||||||| Sbjct: 645 gaaacaggaggttgtcaagatggagcgcgatatactgaatgttctcaagtttgagatggg 704 Query: 631 caatcctaccaccaagacgttcctgaggatgttcattagatctagccaagaa---gataa 687 ||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 705 caatcctacaaccaagacgttcctgaggatgttcatcagatctagccaagaagacgataa 764 Query: 688 gtatcctagcctgtcgttagagtttatggggagctatcttgcggagctgagcctgttgga 747 |||||||||||| | || ||||| ||| | ||||||||||| |||||||||||| |||| Sbjct: 765 gtatcctagccttcccttggagttcatgtgtagctatcttgccgagctgagcctgctgga 824 Query: 748 gtacggttgtgttcggttcttgccatcagttgttgcagcttcagcagtgttcgttgcaag 807 |||||| ||||||||| |||||||||| ||||||||||| |||| ||||| |||||||| Sbjct: 825 gtacggctgtgttcggctcttgccatccgttgttgcagcctcagtggtgtttgttgcaag 884 Query: 808 gctgacccttgatccagacaccaacccatggagcaagaagttgcagacagtgacgggcta 867 ||| ||||||||| |||||||||| || ||||||||||||||||| ||||| ||||| Sbjct: 885 gctaacccttgattcagacaccaatccttggagcaagaagttgcaagaggtgaccggcta 944 Query: 868 tagggcatctgagttgaatgattgcattacttgcatacatgacttgcagctgaacaggaa 927 ||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||| Sbjct: 945 cagggcatctgagttgaaggattgcattacctgcatacatgacttgcagctaaacaggaa 1004 Query: 928 aggatcgccttttatggcgacccgggacaaatacaagcaacacaggtttaagggtgtatc 987 ||| || || | ||||| | ||||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 1005 agggtcatctctaatggctatccgggacaagtacaagcaacataggttcaagggcgtatc 1064 Query: 988 agcattgctacctccggttgacatccccgcatcgtatttcaaagacctaaaggagtag 1045 | ||||| |||| || ||||| ||||| ||||| || ||| |||||||||| |||||| Sbjct: 1065 aacattgttaccccctgttgagatccctgcatcatacttcgaagacctaaacgagtag 1122 Score = 172 bits (87), Expect = 2e-39 Identities = 128/141 (90%), Gaps = 3/141 (2%) Strand = Plus / Plus Query: 116 atggccgacaaggagaacgccgccgcggctc---cccgcctcacccgcgcagccgccaag 172 ||||||| ||||||||||||||| ||||| | |||||||||||||||| ||||||||| Sbjct: 1 atggccggcaaggagaacgccgcggcggcgcagccccgcctcacccgcgccgccgccaag 60 Query: 173 cgcgctgccgccgtcactgctgtggctatcgccgccaagcgcaagcgcgtcgcgctcagc 232 ||||| ||||||||||| || ||||| |||||||||||||||||||||||||||||||| Sbjct: 61 cgcgcggccgccgtcaccgccgtggccgtcgccgccaagcgcaagcgcgtcgcgctcagc 120 Query: 233 gagctccccacgctctccaac 253 |||||||||||||| |||||| Sbjct: 121 gagctccccacgctgtccaac 141 >ref|NM_001073669.1| Oryza sativa (japonica cultivar-group) Os12g0581800 (Os12g0581800) mRNA, complete cds Length = 1607 Score = 176 bits (89), Expect = 2e-40 Identities = 373/467 (79%), Gaps = 3/467 (0%) Strand = Plus / Plus Query: 391 cgtctccgacacgctctacctcaccgtctcctacatcgaccgattcctctccgccaacgc 450 |||| ||||||||||||||||| ||||||||||| ||||||| | |||||||||| || | Sbjct: 545 cgtcgccgacacgctctacctcgccgtctcctacctcgaccgctacctctccgcccaccc 604 Query: 451 catcaaccgccagaagctccagctgctcgccgtctccgccatgctcattgcctccaagta 510 ||| ||| | | ||| ||||| |||| |||| |||||||||||| || | ||||| Sbjct: 605 gctcaggcgcaacaggctgcagctcctcggcgtcggcgccatgctcatcgctgcgaagta 664 Query: 511 tgaggagatcagccccccaaacgtggaggacttctgctacatcaccgacaacacctacat 570 |||||||| ||||| || | |||||||| |||||||||||||| || || || |||| Sbjct: 665 cgaggagattagccctcctcatgtggaggatttctgctacatcactgataatacgtacac 724 Query: 571 gaagcaggaggttgttaagatggagagtgatatactaaatcttctcaagtttgagatggg 630 | |||||||||||| ||||||||||| || ||||| || |||||| |||| |||||||| Sbjct: 725 taggcaggaggttgtcaagatggagagcgacatactcaagcttctcgagttcgagatggg 784 Query: 631 caatcctaccaccaagacgttcctgaggatgttcattagatctagccaagaagataagta 690 ||||||||||| |||||| ||||| ||| ||||| |||||| |||| ||||| || | Sbjct: 785 caatcctaccatcaagacattcctcaggcggttcacgagatcttgccaggaagacaaaaa 844 Query: 691 tc---ctagcctgtcgttagagtttatggggagctatcttgcggagctgagcctgttgga 747 | | ||| ||| || ||||| |||||||| |||||||| ||||| || || | || Sbjct: 845 gcgctccagcttgttattggagttcatggggagttatcttgctgagcttagtctacttga 904 Query: 748 gtacggttgtgttcggttcttgccatcagttgttgcagcttcagcagtgttcgttgcaag 807 ||||| ||| | |||||||||||||| || ||||| || |||| ||||| ||||| | Sbjct: 905 ctacggctgtctccggttcttgccatcggtggttgctgcctcagtggtgtttgttgctaa 964 Query: 808 gctgacccttgatccagacaccaacccatggagcaagaagttgcaga 854 |||| | ||||||| ||||||| || |||||||||||| |||||| Sbjct: 965 actgaacattgatccgtacaccaatccttggagcaagaagatgcaga 1011 >dbj|AK110937.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-G05, full insert sequence Length = 1607 Score = 176 bits (89), Expect = 2e-40 Identities = 373/467 (79%), Gaps = 3/467 (0%) Strand = Plus / Plus Query: 391 cgtctccgacacgctctacctcaccgtctcctacatcgaccgattcctctccgccaacgc 450 |||| ||||||||||||||||| ||||||||||| ||||||| | |||||||||| || | Sbjct: 546 cgtcgccgacacgctctacctcgccgtctcctacctcgaccgctacctctccgcccaccc 605 Query: 451 catcaaccgccagaagctccagctgctcgccgtctccgccatgctcattgcctccaagta 510 ||| ||| | | ||| ||||| |||| |||| |||||||||||| || | ||||| Sbjct: 606 gctcaggcgcaacaggctgcagctcctcggcgtcggcgccatgctcatcgctgcgaagta 665 Query: 511 tgaggagatcagccccccaaacgtggaggacttctgctacatcaccgacaacacctacat 570 |||||||| ||||| || | |||||||| |||||||||||||| || || || |||| Sbjct: 666 cgaggagattagccctcctcatgtggaggatttctgctacatcactgataatacgtacac 725 Query: 571 gaagcaggaggttgttaagatggagagtgatatactaaatcttctcaagtttgagatggg 630 | |||||||||||| ||||||||||| || ||||| || |||||| |||| |||||||| Sbjct: 726 taggcaggaggttgtcaagatggagagcgacatactcaagcttctcgagttcgagatggg 785 Query: 631 caatcctaccaccaagacgttcctgaggatgttcattagatctagccaagaagataagta 690 ||||||||||| |||||| ||||| ||| ||||| |||||| |||| ||||| || | Sbjct: 786 caatcctaccatcaagacattcctcaggcggttcacgagatcttgccaggaagacaaaaa 845 Query: 691 tc---ctagcctgtcgttagagtttatggggagctatcttgcggagctgagcctgttgga 747 | | ||| ||| || ||||| |||||||| |||||||| ||||| || || | || Sbjct: 846 gcgctccagcttgttattggagttcatggggagttatcttgctgagcttagtctacttga 905 Query: 748 gtacggttgtgttcggttcttgccatcagttgttgcagcttcagcagtgttcgttgcaag 807 ||||| ||| | |||||||||||||| || ||||| || |||| ||||| ||||| | Sbjct: 906 ctacggctgtctccggttcttgccatcggtggttgctgcctcagtggtgtttgttgctaa 965 Query: 808 gctgacccttgatccagacaccaacccatggagcaagaagttgcaga 854 |||| | ||||||| ||||||| || |||||||||||| |||||| Sbjct: 966 actgaacattgatccgtacaccaatccttggagcaagaagatgcaga 1012 >gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete sequence Length = 157397 Score = 174 bits (88), Expect = 6e-40 Identities = 129/142 (90%), Gaps = 3/142 (2%) Strand = Plus / Minus Query: 115 gatggccgacaaggagaacgccgccgcggctc---cccgcctcacccgcgcagccgccaa 171 |||||||| ||||||||||||||| ||||| | |||||||||||||||| |||||||| Sbjct: 14760 gatggccggcaaggagaacgccgcggcggcgcagccccgcctcacccgcgccgccgccaa 14701 Query: 172 gcgcgctgccgccgtcactgctgtggctatcgccgccaagcgcaagcgcgtcgcgctcag 231 |||||| ||||||||||| || ||||| ||||||||||||||||||||||||||||||| Sbjct: 14700 gcgcgcggccgccgtcaccgccgtggccgtcgccgccaagcgcaagcgcgtcgcgctcag 14641 Query: 232 cgagctccccacgctctccaac 253 ||||||||||||||| |||||| Sbjct: 14640 cgagctccccacgctgtccaac 14619 Score = 170 bits (86), Expect = 9e-39 Identities = 107/114 (93%) Strand = Plus / Minus Query: 391 cgtctccgacacgctctacctcaccgtctcctacatcgaccgattcctctccgccaacgc 450 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 14198 cgtctccgacacgctctacctcaccgtctcctacatcgaccgcttcctctccgccaaatc 14139 Query: 451 catcaaccgccagaagctccagctgctcgccgtctccgccatgctcattgcctc 504 |||||||||||||||||| ||||| |||| |||||||||||||||||| ||||| Sbjct: 14138 catcaaccgccagaagctgcagctcctcggcgtctccgccatgctcatcgcctc 14085 Score = 145 bits (73), Expect = 5e-31 Identities = 127/145 (87%) Strand = Plus / Minus Query: 687 agtatcctagcctgtcgttagagtttatggggagctatcttgcggagctgagcctgttgg 746 ||||||||||||| | || ||||| ||| | ||||||||||| |||||||||||| ||| Sbjct: 13478 agtatcctagccttcccttggagttcatgtgtagctatcttgccgagctgagcctgctgg 13419 Query: 747 agtacggttgtgttcggttcttgccatcagttgttgcagcttcagcagtgttcgttgcaa 806 ||||||| ||||||||| |||||||||| ||||||||||| |||| ||||| ||||||| Sbjct: 13418 agtacggctgtgttcggctcttgccatccgttgttgcagcctcagtggtgtttgttgcaa 13359 Query: 807 ggctgacccttgatccagacaccaa 831 |||| ||||||||| |||||||||| Sbjct: 13358 ggctaacccttgattcagacaccaa 13334 Score = 127 bits (64), Expect = 1e-25 Identities = 115/132 (87%) Strand = Plus / Minus Query: 838 gagcaagaagttgcagacagtgacgggctatagggcatctgagttgaatgattgcattac 897 ||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 13241 gagcaagaagttgcaagaggtgaccggctacagggcatctgagttgaaggattgcattac 13182 Query: 898 ttgcatacatgacttgcagctgaacaggaaaggatcgccttttatggcgacccgggacaa 957 |||||||||||||||||||| ||||||||||| || || | ||||| | ||||||||| Sbjct: 13181 ctgcatacatgacttgcagctaaacaggaaagggtcatctctaatggctatccgggacaa 13122 Query: 958 atacaagcaaca 969 ||||||||||| Sbjct: 13121 gtacaagcaaca 13110 Score = 111 bits (56), Expect = 7e-21 Identities = 74/80 (92%) Strand = Plus / Minus Query: 579 aggttgttaagatggagagtgatatactaaatcttctcaagtttgagatgggcaatccta 638 ||||||| ||||||||| | |||||||| ||| ||||||||||||||||||||||||||| Sbjct: 13794 aggttgtcaagatggagcgcgatatactgaatgttctcaagtttgagatgggcaatccta 13735 Query: 639 ccaccaagacgttcctgagg 658 | |||||||||||||||||| Sbjct: 13734 caaccaagacgttcctgagg 13715 Score = 97.6 bits (49), Expect = 1e-16 Identities = 70/77 (90%) Strand = Plus / Minus Query: 506 aagtatgaggagatcagccccccaaacgtggaggacttctgctacatcaccgacaacacc 565 |||||||||||||||||||||||||| |||||||| |||||||| || |||||||| ||| Sbjct: 13990 aagtatgaggagatcagccccccaaatgtggaggatttctgctatataaccgacaatacc 13931 Query: 566 tacatgaagcaggaggt 582 || ||||| |||||||| Sbjct: 13930 tatatgaaacaggaggt 13914 Score = 91.7 bits (46), Expect = 7e-15 Identities = 121/145 (83%), Gaps = 2/145 (1%) Strand = Plus / Minus Query: 977 aagggtgtatcagcattgctacctccggttgacatccccgcatcgtatttcaaagaccta 1036 ||||| |||||| ||||| |||| || ||||| ||||| ||||| || ||| |||||||| Sbjct: 13016 aagggcgtatcaacattgttaccccctgttgagatccctgcatcatacttcgaagaccta 12957 Query: 1037 aaggagtagatgttcctgcatgatgctgtagtaagattaacactttgagatttcctcaag 1096 || ||||||||||| ||| |||||| ||| || ||||||| | ||||| |||||||||| Sbjct: 12956 aacgagtagatgttactggatgatgatgtggtgagattaaga--ttgagctttcctcaag 12899 Query: 1097 cgagatacatgatgactgaagttga 1121 |||| |||| ||||||||||||| Sbjct: 12898 atagatccatggtgactgaagttga 12874 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 174 bits (88), Expect = 6e-40 Identities = 129/142 (90%), Gaps = 3/142 (2%) Strand = Plus / Plus Query: 115 gatggccgacaaggagaacgccgccgcggctc---cccgcctcacccgcgcagccgccaa 171 |||||||| ||||||||||||||| ||||| | |||||||||||||||| |||||||| Sbjct: 22646415 gatggccggcaaggagaacgccgcggcggcgcagccccgcctcacccgcgccgccgccaa 22646474 Query: 172 gcgcgctgccgccgtcactgctgtggctatcgccgccaagcgcaagcgcgtcgcgctcag 231 |||||| ||||||||||| || ||||| ||||||||||||||||||||||||||||||| Sbjct: 22646475 gcgcgcggccgccgtcaccgccgtggccgtcgccgccaagcgcaagcgcgtcgcgctcag 22646534 Query: 232 cgagctccccacgctctccaac 253 ||||||||||||||| |||||| Sbjct: 22646535 cgagctccccacgctgtccaac 22646556 Score = 170 bits (86), Expect = 9e-39 Identities = 107/114 (93%) Strand = Plus / Plus Query: 391 cgtctccgacacgctctacctcaccgtctcctacatcgaccgattcctctccgccaacgc 450 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 22646977 cgtctccgacacgctctacctcaccgtctcctacatcgaccgcttcctctccgccaaatc 22647036 Query: 451 catcaaccgccagaagctccagctgctcgccgtctccgccatgctcattgcctc 504 |||||||||||||||||| ||||| |||| |||||||||||||||||| ||||| Sbjct: 22647037 catcaaccgccagaagctgcagctcctcggcgtctccgccatgctcatcgcctc 22647090 Score = 145 bits (73), Expect = 5e-31 Identities = 127/145 (87%) Strand = Plus / Plus Query: 687 agtatcctagcctgtcgttagagtttatggggagctatcttgcggagctgagcctgttgg 746 ||||||||||||| | || ||||| ||| | ||||||||||| |||||||||||| ||| Sbjct: 22647697 agtatcctagccttcccttggagttcatgtgtagctatcttgccgagctgagcctgctgg 22647756 Query: 747 agtacggttgtgttcggttcttgccatcagttgttgcagcttcagcagtgttcgttgcaa 806 ||||||| ||||||||| |||||||||| ||||||||||| |||| ||||| ||||||| Sbjct: 22647757 agtacggctgtgttcggctcttgccatccgttgttgcagcctcagtggtgtttgttgcaa 22647816 Query: 807 ggctgacccttgatccagacaccaa 831 |||| ||||||||| |||||||||| Sbjct: 22647817 ggctaacccttgattcagacaccaa 22647841 Score = 127 bits (64), Expect = 1e-25 Identities = 115/132 (87%) Strand = Plus / Plus Query: 838 gagcaagaagttgcagacagtgacgggctatagggcatctgagttgaatgattgcattac 897 ||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 22647934 gagcaagaagttgcaagaggtgaccggctacagggcatctgagttgaaggattgcattac 22647993 Query: 898 ttgcatacatgacttgcagctgaacaggaaaggatcgccttttatggcgacccgggacaa 957 |||||||||||||||||||| ||||||||||| || || | ||||| | ||||||||| Sbjct: 22647994 ctgcatacatgacttgcagctaaacaggaaagggtcatctctaatggctatccgggacaa 22648053 Query: 958 atacaagcaaca 969 ||||||||||| Sbjct: 22648054 gtacaagcaaca 22648065 Score = 111 bits (56), Expect = 7e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 579 aggttgttaagatggagagtgatatactaaatcttctcaagtttgagatgggcaatccta 638 ||||||| ||||||||| | |||||||| ||| ||||||||||||||||||||||||||| Sbjct: 22647381 aggttgtcaagatggagcgcgatatactgaatgttctcaagtttgagatgggcaatccta 22647440 Query: 639 ccaccaagacgttcctgagg 658 | |||||||||||||||||| Sbjct: 22647441 caaccaagacgttcctgagg 22647460 Score = 97.6 bits (49), Expect = 1e-16 Identities = 70/77 (90%) Strand = Plus / Plus Query: 506 aagtatgaggagatcagccccccaaacgtggaggacttctgctacatcaccgacaacacc 565 |||||||||||||||||||||||||| |||||||| |||||||| || |||||||| ||| Sbjct: 22647185 aagtatgaggagatcagccccccaaatgtggaggatttctgctatataaccgacaatacc 22647244 Query: 566 tacatgaagcaggaggt 582 || ||||| |||||||| Sbjct: 22647245 tatatgaaacaggaggt 22647261 Score = 91.7 bits (46), Expect = 7e-15 Identities = 121/145 (83%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 977 aagggtgtatcagcattgctacctccggttgacatccccgcatcgtatttcaaagaccta 1036 ||||| |||||| ||||| |||| || ||||| ||||| ||||| || ||| |||||||| Sbjct: 22648159 aagggcgtatcaacattgttaccccctgttgagatccctgcatcatacttcgaagaccta 22648218 Query: 1037 aaggagtagatgttcctgcatgatgctgtagtaagattaacactttgagatttcctcaag 1096 || ||||||||||| ||| |||||| ||| || ||||||| | ||||| |||||||||| Sbjct: 22648219 aacgagtagatgttactggatgatgatgtggtgagattaaga--ttgagctttcctcaag 22648276 Query: 1097 cgagatacatgatgactgaagttga 1121 |||| |||| ||||||||||||| Sbjct: 22648277 atagatccatggtgactgaagttga 22648301