BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst035g23 (1106 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|DQ683568.1| Oryza sativa (japonica cultivar-group) response r... 452 e-123 dbj|AB249657.1| Oryza sativa (japonica cultivar-group) OsRR7 mRN... 335 2e-88 emb|AJ938076.1| Oryza sativa (indica cultivar-group) mRNA for Ty... 335 2e-88 dbj|AB042260.1| Zea mays ZmRR3 mRNA for response regulator, comp... 188 3e-44 ref|NM_001059883.1| Oryza sativa (japonica cultivar-group) Os04g... 186 1e-43 >gb|DQ683568.1| Oryza sativa (japonica cultivar-group) response regulator (RR) mRNA, complete cds Length = 633 Score = 452 bits (228), Expect = e-123 Identities = 315/344 (91%) Strand = Plus / Plus Query: 484 gccgtacgtggtggcggtggatgacagctccgtcgaccgcgccgtcatcaccgcgctgct 543 |||||||||| |||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 270 gccgtacgtgatggccgtcgatgacagctccgtcgaccgcgccgtcatcacggcgctgct 329 Query: 544 ccggcgatccaagtaccgagttactgctgtggacagtgggaagcgggccctggagatatt 603 |||||||||||||||||| || ||||| || ||||||||||| |||| ||||||||||| Sbjct: 330 ccggcgatccaagtaccgcgtcactgccgtagacagtgggaaaagggcgctggagatatt 389 Query: 604 gggctcggagcctaatgtgagcatgatcatcacggactactggatgcccgagatgaccgg 663 ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 390 gggctcggaacctaatgtgagcatgatcatcacggactactggatgccggagatgaccgg 449 Query: 664 gtatgacctgctcaagaaggtcaaggactcgtcagagctcaagcagatccccgtggtgat 723 ||| ||||||||||||||| ||||||| ||||| ||||| ||||||||||| |||||||| Sbjct: 450 gtacgacctgctcaagaagatcaaggaatcgtctgagctgaagcagatcccggtggtgat 509 Query: 724 aatgtcctcagagaacgtgcccacgaggatcaccagatgcttggaagaaggtgcagagga 783 |||||| ||||||||||||||||| ||||||| |||||||||||||||||| || ||||| Sbjct: 510 aatgtcgtcagagaacgtgcccacaaggatcagcagatgcttggaagaaggcgcggagga 569 Query: 784 cttccttctcaagcccgtcaggccgtcggacatctcgcgcataa 827 |||||| |||||||||||| | ||| |||||||||| ||||||| Sbjct: 570 cttcctgctcaagcccgtccgaccggcggacatctcccgcataa 613 >dbj|AB249657.1| Oryza sativa (japonica cultivar-group) OsRR7 mRNA for typeA response regulator 7, complete cds Length = 621 Score = 335 bits (169), Expect = 2e-88 Identities = 232/253 (91%) Strand = Plus / Plus Query: 575 gacagtgggaagcgggccctggagatattgggctcggagcctaatgtgagcatgatcatc 634 ||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 349 gacagtgggaaaagggcgctggagatattgggctcggaacctaatgtgagcatgatcatc 408 Query: 635 acggactactggatgcccgagatgaccgggtatgacctgctcaagaaggtcaaggactcg 694 ||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||| ||| Sbjct: 409 acggactactggatgccggagatgaccgggtacgacctgctcaagaagatcaaggaatcg 468 Query: 695 tcagagctcaagcagatccccgtggtgataatgtcctcagagaacgtgcccacgaggatc 754 || ||||| ||||||||||| |||||||||||||| ||||||||||||||||| |||||| Sbjct: 469 tctgagctgaagcagatcccggtggtgataatgtcgtcagagaacgtgcccacaaggatc 528 Query: 755 accagatgcttggaagaaggtgcagaggacttccttctcaagcccgtcaggccgtcggac 814 | |||||||||||||||||| || ||||||||||| |||||||||||| | ||| ||||| Sbjct: 529 agcagatgcttggaagaaggcgcggaggacttcctgctcaagcccgtccgaccggcggac 588 Query: 815 atctcgcgcataa 827 ||||| ||||||| Sbjct: 589 atctcccgcataa 601 Score = 123 bits (62), Expect = 2e-24 Identities = 74/78 (94%) Strand = Plus / Plus Query: 484 gccgtacgtggtggcggtggatgacagctccgtcgaccgcgccgtcatcaccgcgctgct 543 |||||||||| |||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 270 gccgtacgtgatggccgtcgatgacagctccgtcgaccgcgccgtcatcacggcgctgct 329 Query: 544 ccggcgatccaagtaccg 561 |||||||||||||||||| Sbjct: 330 ccggcgatccaagtaccg 347 >emb|AJ938076.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 7 (rr7 gene) Length = 621 Score = 335 bits (169), Expect = 2e-88 Identities = 232/253 (91%) Strand = Plus / Plus Query: 575 gacagtgggaagcgggccctggagatattgggctcggagcctaatgtgagcatgatcatc 634 ||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 349 gacagtgggaaaagggcgctggagatattgggctcggaacctaatgtgagcatgatcatc 408 Query: 635 acggactactggatgcccgagatgaccgggtatgacctgctcaagaaggtcaaggactcg 694 ||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||| ||| Sbjct: 409 acggactactggatgccggagatgaccgggtacgacctgctcaagaagatcaaggaatcg 468 Query: 695 tcagagctcaagcagatccccgtggtgataatgtcctcagagaacgtgcccacgaggatc 754 || ||||| ||||||||||| |||||||||||||| ||||||||||||||||| |||||| Sbjct: 469 tctgagctgaagcagatcccggtggtgataatgtcgtcagagaacgtgcccacaaggatc 528 Query: 755 accagatgcttggaagaaggtgcagaggacttccttctcaagcccgtcaggccgtcggac 814 | |||||||||||||||||| || ||||||||||| |||||||||||| | ||| ||||| Sbjct: 529 agcagatgcttggaagaaggcgcggaggacttcctgctcaagcccgtccgaccggcggac 588 Query: 815 atctcgcgcataa 827 ||||| ||||||| Sbjct: 589 atctcccgcataa 601 Score = 123 bits (62), Expect = 2e-24 Identities = 74/78 (94%) Strand = Plus / Plus Query: 484 gccgtacgtggtggcggtggatgacagctccgtcgaccgcgccgtcatcaccgcgctgct 543 |||||||||| |||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 270 gccgtacgtgatggccgtcgatgacagctccgtcgaccgcgccgtcatcacggcgctgct 329 Query: 544 ccggcgatccaagtaccg 561 |||||||||||||||||| Sbjct: 330 ccggcgatccaagtaccg 347 >dbj|AB042260.1| Zea mays ZmRR3 mRNA for response regulator, complete cds Length = 545 Score = 188 bits (95), Expect = 3e-44 Identities = 269/327 (82%) Strand = Plus / Plus Query: 497 gcggtggatgacagctccgtcgaccgcgccgtcatcaccgcgctgctccggcgatccaag 556 |||||||| |||||||| |||||||||||||||||| ||| | ||| || | || || Sbjct: 102 gcggtggacgacagctcggtcgaccgcgccgtcatcgccggcatcctcaggagctcacag 161 Query: 557 taccgagttactgctgtggacagtgggaagcgggccctggagatattgggctcggagcct 616 | ||| || || || |||||||| |||||| |||| |||||| | ||||| | ||||| Sbjct: 162 ttccgcgtgacggccgtggacagcgggaagagggcactggagctgctgggcaccgagccc 221 Query: 617 aatgtgagcatgatcatcacggactactggatgcccgagatgaccgggtatgacctgctc 676 || |||||||||||||| || ||||||||||||||||||||||| || || || || ||| Sbjct: 222 aacgtgagcatgatcattaccgactactggatgcccgagatgactggatacgagctcctc 281 Query: 677 aagaaggtcaaggactcgtcagagctcaagcagatccccgtggtgataatgtcctcagag 736 |||||| ||||||| ||||| ||| ||| |||||||||||||||| |||||||||||| Sbjct: 282 aagaagatcaaggagtcgtccaggctgaaggagatccccgtggtgatcatgtcctcagag 341 Query: 737 aacgtgcccacgaggatcaccagatgcttggaagaaggtgcagaggacttccttctcaag 796 |||||||| || ||||||| ||| ||| |||| ||||| || ||||| ||||| || ||| Sbjct: 342 aacgtgccgacaaggatcaacaggtgcctggaggaaggcgccgaggatttcctgctgaag 401 Query: 797 cccgtcaggccgtcggacatctcgcgc 823 |||||| | ||||| ||| | |||||| Sbjct: 402 cccgtccgcccgtccgacgtgtcgcgc 428 >ref|NM_001059883.1| Oryza sativa (japonica cultivar-group) Os04g0524300 (Os04g0524300) mRNA, complete cds Length = 841 Score = 186 bits (94), Expect = 1e-43 Identities = 262/318 (82%) Strand = Plus / Plus Query: 497 gcggtggatgacagctccgtcgaccgcgccgtcatcaccgcgctgctccggcgatccaag 556 |||||||| ||||||||||| ||||||||||||||| ||| | |||||| | || || Sbjct: 130 gcggtggacgacagctccgtggaccgcgccgtcatctccggcatcctccggagctctcag 189 Query: 557 taccgagttactgctgtggacagtgggaagcgggccctggagatattgggctcggagcct 616 | ||| || || ||||||||||| |||||| |||| ||||| | | |||||||| || Sbjct: 190 ttccgcgtgacggctgtggacagcgggaagagggcattggagctgctaggctcggaaccg 249 Query: 617 aatgtgagcatgatcatcacggactactggatgcccgagatgaccgggtatgacctgctc 676 |||||||||||||| ||||| |||||||||||||| ||||||||||||||||| || || Sbjct: 250 aatgtgagcatgattatcactgactactggatgccggagatgaccgggtatgaactcctg 309 Query: 677 aagaaggtcaaggactcgtcagagctcaagcagatccccgtggtgataatgtcctcagag 736 |||||||||||||| ||||| ||| ||| ||||||| |||||||| |||||||| ||| Sbjct: 310 aagaaggtcaaggagtcgtccaggctgaaggagatccctgtggtgatcatgtcctcggag 369 Query: 737 aacgtgcccacgaggatcaccagatgcttggaagaaggtgcagaggacttccttctcaag 796 ||||| | || ||||||| ||| |||||||| ||||| || ||||| ||| | || ||| Sbjct: 370 aacgtctctacaaggatcaacaggtgcttggaggaaggagcggaggatttcttgctgaag 429 Query: 797 cccgtcaggccgtcggac 814 ||||| |||||||||| Sbjct: 430 cccgtgcagccgtcggac 447