BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst035a22
         (570 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...   198   2e-47
dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic D...   198   2e-47
ref|NM_001052852.1| Oryza sativa (japonica cultivar-group) Os02g...   196   7e-47
dbj|AK103901.1| Oryza sativa (japonica cultivar-group) cDNA clon...   196   7e-47
gb|AY224455.1| Oryza sativa (japonica cultivar-group) isolate 23...   167   6e-38

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score =  198 bits (100), Expect = 2e-47
 Identities = 139/152 (91%)
 Strand = Plus / Plus

                                                                           
Query: 178     aggtgttgcatgctggcagtggaaacaagaatgcattgaaggcactcattgcgactgaat 237
               |||| |||||||||||||||||||||||||||||||| ||||||||||||||  | || |
Sbjct: 6717300 aggtattgcatgctggcagtggaaacaagaatgcattcaaggcactcattgctgccgagt 6717359

                                                                           
Query: 238     acagtggtgccaaggttgagttggtgaagaacttccagatgggtgtctccgacaagactc 297
               ||  ||||| |||||||||||||||||||||||| ||||||||||||||| ||||||| |
Sbjct: 6717360 actctggtgtcaaggttgagttggtgaagaactttcagatgggtgtctccaacaagacac 6717419

                                               
Query: 298     ctgagtttctcaagatgaaccctattgggaag 329
               ||||||||||||||||||| ||||||||||||
Sbjct: 6717420 ctgagtttctcaagatgaatcctattgggaag 6717451



 Score =  153 bits (77), Expect = 9e-34
 Identities = 119/133 (89%)
 Strand = Plus / Plus

                                                                           
Query: 197     tggaaacaagaatgcattgaaggcactcattgcgactgaatacagtggtgccaaggttga 256
               |||||||||||||||||| ||||||||||||||  | || |||  ||||| |||||||||
Sbjct: 6722379 tggaaacaagaatgcattcaaggcactcattgctgccgagtactctggtgtcaaggttga 6722438

                                                                           
Query: 257     gttggtgaagaacttccagatgggtgtctccgacaagactcctgagtttctcaagatgaa 316
               |||||  |||||||| ||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 6722439 gttggcaaagaactttcagatgggtgtctccaacaagactcctgagtatctcaagatgaa 6722498

                            
Query: 317     ccctattgggaag 329
                ||||||||||||
Sbjct: 6722499 tcctattgggaag 6722511


>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1131G07
          Length = 133992

 Score =  198 bits (100), Expect = 2e-47
 Identities = 139/152 (91%)
 Strand = Plus / Plus

                                                                         
Query: 178   aggtgttgcatgctggcagtggaaacaagaatgcattgaaggcactcattgcgactgaat 237
             |||| |||||||||||||||||||||||||||||||| ||||||||||||||  | || |
Sbjct: 38353 aggtattgcatgctggcagtggaaacaagaatgcattcaaggcactcattgctgccgagt 38412

                                                                         
Query: 238   acagtggtgccaaggttgagttggtgaagaacttccagatgggtgtctccgacaagactc 297
             ||  ||||| |||||||||||||||||||||||| ||||||||||||||| ||||||| |
Sbjct: 38413 actctggtgtcaaggttgagttggtgaagaactttcagatgggtgtctccaacaagacac 38472

                                             
Query: 298   ctgagtttctcaagatgaaccctattgggaag 329
             ||||||||||||||||||| ||||||||||||
Sbjct: 38473 ctgagtttctcaagatgaatcctattgggaag 38504



 Score =  153 bits (77), Expect = 9e-34
 Identities = 119/133 (89%)
 Strand = Plus / Plus

                                                                         
Query: 197   tggaaacaagaatgcattgaaggcactcattgcgactgaatacagtggtgccaaggttga 256
             |||||||||||||||||| ||||||||||||||  | || |||  ||||| |||||||||
Sbjct: 43432 tggaaacaagaatgcattcaaggcactcattgctgccgagtactctggtgtcaaggttga 43491

                                                                         
Query: 257   gttggtgaagaacttccagatgggtgtctccgacaagactcctgagtttctcaagatgaa 316
             |||||  |||||||| ||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 43492 gttggcaaagaactttcagatgggtgtctccaacaagactcctgagtatctcaagatgaa 43551

                          
Query: 317   ccctattgggaag 329
              ||||||||||||
Sbjct: 43552 tcctattgggaag 43564


>ref|NM_001052852.1| Oryza sativa (japonica cultivar-group) Os02g0220500 (Os02g0220500)
           mRNA, complete cds
          Length = 1705

 Score =  196 bits (99), Expect = 7e-47
 Identities = 135/147 (91%)
 Strand = Plus / Plus

                                                                       
Query: 183 ttgcatgctggcagtggaaacaagaatgcattgaaggcactcattgcgactgaatacagt 242
           |||||||||||||||||||||||||||||||| ||||||||||||||  | || |||  |
Sbjct: 126 ttgcatgctggcagtggaaacaagaatgcattcaaggcactcattgctgccgagtactct 185

                                                                       
Query: 243 ggtgccaaggttgagttggtgaagaacttccagatgggtgtctccgacaagactcctgag 302
           |||| |||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||
Sbjct: 186 ggtgtcaaggttgagttggtgaagaactttcagatgggtgtctccaacaagacacctgag 245

                                      
Query: 303 tttctcaagatgaaccctattgggaag 329
           |||||||||||||| ||||||||||||
Sbjct: 246 tttctcaagatgaatcctattgggaag 272


>dbj|AK103901.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150K18, full
           insert sequence
          Length = 1708

 Score =  196 bits (99), Expect = 7e-47
 Identities = 135/147 (91%)
 Strand = Plus / Plus

                                                                       
Query: 183 ttgcatgctggcagtggaaacaagaatgcattgaaggcactcattgcgactgaatacagt 242
           |||||||||||||||||||||||||||||||| ||||||||||||||  | || |||  |
Sbjct: 127 ttgcatgctggcagtggaaacaagaatgcattcaaggcactcattgctgccgagtactct 186

                                                                       
Query: 243 ggtgccaaggttgagttggtgaagaacttccagatgggtgtctccgacaagactcctgag 302
           |||| |||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||
Sbjct: 187 ggtgtcaaggttgagttggtgaagaactttcagatgggtgtctccaacaagacacctgag 246

                                      
Query: 303 tttctcaagatgaaccctattgggaag 329
           |||||||||||||| ||||||||||||
Sbjct: 247 tttctcaagatgaatcctattgggaag 273


>gb|AY224455.1| Oryza sativa (japonica cultivar-group) isolate 23443 elongation
           factor 1 gamma-like protein mRNA, partial cds
          Length = 1230

 Score =  167 bits (84), Expect = 6e-38
 Identities = 120/132 (90%)
 Strand = Plus / Plus

                                                                       
Query: 198 ggaaacaagaatgcattgaaggcactcattgcgactgaatacagtggtgccaaggttgag 257
           ||||||||||||||||| ||||||||||||||  | || |||  ||||| ||||||||||
Sbjct: 1   ggaaacaagaatgcattcaaggcactcattgctgccgagtactctggtgtcaaggttgag 60

                                                                       
Query: 258 ttggtgaagaacttccagatgggtgtctccgacaagactcctgagtttctcaagatgaac 317
           |||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| 
Sbjct: 61  ttggtgaagaactttcagatgggtgtctccaacaagacacctgagtttctcaagatgaat 120

                       
Query: 318 cctattgggaag 329
           ||||||||||||
Sbjct: 121 cctattgggaag 132