BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst034o11
         (1136 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 geno...   248   4e-62
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...   248   4e-62
ref|NM_001064207.1| Oryza sativa (japonica cultivar-group) Os06g...   161   8e-36
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...   161   8e-36
dbj|AP004728.3| Oryza sativa (japonica cultivar-group) genomic D...   161   8e-36

>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete
              sequence
          Length = 163712

 Score =  248 bits (125), Expect = 4e-62
 Identities = 203/229 (88%)
 Strand = Plus / Minus

                                                                          
Query: 424    ctgtggcgcgcgtccttcgcgccgcgggtgcgcgggtacccgttccggcgggtccccaag 483
              |||||||||||||| |||| ||||||||| | ||| ||||||| |||||| || ||||||
Sbjct: 135523 ctgtggcgcgcgtcgttcgtgccgcgggtccccggctacccgtaccggcgcgtgcccaag 135464

                                                                          
Query: 484    gtggcgttcatgttcctcacgcgcggaccgctgccgctggcgccgctctgggagtgcttc 543
              ||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||| |||||
Sbjct: 135463 gtggccttcatgttcctcacccgcggcccgctcccgctggcgccgctctgggagcgcttc 135404

                                                                          
Query: 544    ttccgggggcacgagggccgctactccatctacgtccacacgctgccgtcctaccaagcc 603
              ||||| || ||||| || | ||||||| ||||||||||| |||||||||||||||  |||
Sbjct: 135403 ttccgcggccacgacgggctctactccgtctacgtccacgcgctgccgtcctaccgcgcc 135344

                                                               
Query: 604    aacttcacctccaactccatcttctaccgccgccaaatccccagtaagg 652
              ||||||||| || ||||| |||||||||||||||||||||| |||||||
Sbjct: 135343 aacttcaccaccgactccgtcttctaccgccgccaaatcccgagtaagg 135295



 Score =  151 bits (76), Expect = 7e-33
 Identities = 124/140 (88%)
 Strand = Plus / Minus

                                                                          
Query: 193    agggtgttcccgacggggatgctcaaggtgttcctggggttcctgctgctcggcgtgggc 252
              ||||||||||||||||||||||||||||||||||| || ||||| || ||||||||  ||
Sbjct: 135772 agggtgttcccgacggggatgctcaaggtgttcctcggcttcctcctcctcggcgtctgc 135713

                                                                          
Query: 253    ctgtccgccttcggcatgtacatggcgcggcacacgctggcggcgtccgcgcccgcgctg 312
              || |||||   ||| |||||||||||||| ||||||||||||||  ||||||||||||||
Sbjct: 135712 ctctccgcggccgggatgtacatggcgcgccacacgctggcggccgccgcgcccgcgctg 135653

                                  
Query: 313    tttcggccgtgcctgggggc 332
              || || ||||||||||||||
Sbjct: 135652 ttccgcccgtgcctgggggc 135633


>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  248 bits (125), Expect = 4e-62
 Identities = 203/229 (88%)
 Strand = Plus / Plus

                                                                            
Query: 424      ctgtggcgcgcgtccttcgcgccgcgggtgcgcgggtacccgttccggcgggtccccaag 483
                |||||||||||||| |||| ||||||||| | ||| ||||||| |||||| || ||||||
Sbjct: 29727276 ctgtggcgcgcgtcgttcgtgccgcgggtccccggctacccgtaccggcgcgtgcccaag 29727335

                                                                            
Query: 484      gtggcgttcatgttcctcacgcgcggaccgctgccgctggcgccgctctgggagtgcttc 543
                ||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||| |||||
Sbjct: 29727336 gtggccttcatgttcctcacccgcggcccgctcccgctggcgccgctctgggagcgcttc 29727395

                                                                            
Query: 544      ttccgggggcacgagggccgctactccatctacgtccacacgctgccgtcctaccaagcc 603
                ||||| || ||||| || | ||||||| ||||||||||| |||||||||||||||  |||
Sbjct: 29727396 ttccgcggccacgacgggctctactccgtctacgtccacgcgctgccgtcctaccgcgcc 29727455

                                                                 
Query: 604      aacttcacctccaactccatcttctaccgccgccaaatccccagtaagg 652
                ||||||||| || ||||| |||||||||||||||||||||| |||||||
Sbjct: 29727456 aacttcaccaccgactccgtcttctaccgccgccaaatcccgagtaagg 29727504



 Score =  151 bits (76), Expect = 7e-33
 Identities = 124/140 (88%)
 Strand = Plus / Plus

                                                                            
Query: 193      agggtgttcccgacggggatgctcaaggtgttcctggggttcctgctgctcggcgtgggc 252
                ||||||||||||||||||||||||||||||||||| || ||||| || ||||||||  ||
Sbjct: 29727027 agggtgttcccgacggggatgctcaaggtgttcctcggcttcctcctcctcggcgtctgc 29727086

                                                                            
Query: 253      ctgtccgccttcggcatgtacatggcgcggcacacgctggcggcgtccgcgcccgcgctg 312
                || |||||   ||| |||||||||||||| ||||||||||||||  ||||||||||||||
Sbjct: 29727087 ctctccgcggccgggatgtacatggcgcgccacacgctggcggccgccgcgcccgcgctg 29727146

                                    
Query: 313      tttcggccgtgcctgggggc 332
                || || ||||||||||||||
Sbjct: 29727147 ttccgcccgtgcctgggggc 29727166


>ref|NM_001064207.1| Oryza sativa (japonica cultivar-group) Os06g0489200 (Os06g0489200)
           mRNA, complete cds
          Length = 3562

 Score =  161 bits (81), Expect = 8e-36
 Identities = 126/141 (89%)
 Strand = Plus / Plus

                                                                       
Query: 702 ccatggcgttcgatgacgacaaggaggatctcgtggtctacgggacgccaatcgagcgag 761
           |||||| |||||| |||||| | ||||||||||| |||||||||||||| |||||||| |
Sbjct: 126 ccatggggttcgacgacgacgacgaggatctcgtcgtctacgggacgccgatcgagcggg 185

                                                                       
Query: 762 aggaggacacctccgcctgcaagcgtcgggctgtcgccgacgcaggccagctccgcgccc 821
           ||||||||||||||||  ||||||| ||||| |||||||| || ||||||||||||||||
Sbjct: 186 aggaggacacctccgcacgcaagcgccgggccgtcgccgaggccggccagctccgcgccc 245

                                
Query: 822 tccccacatggaagcaggagg 842
           ||||| | |||||||||||||
Sbjct: 246 tccccgcctggaagcaggagg 266


>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score =  161 bits (81), Expect = 8e-36
 Identities = 126/141 (89%)
 Strand = Plus / Minus

                                                                            
Query: 702      ccatggcgttcgatgacgacaaggaggatctcgtggtctacgggacgccaatcgagcgag 761
                |||||| |||||| |||||| | ||||||||||| |||||||||||||| |||||||| |
Sbjct: 16617924 ccatggggttcgacgacgacgacgaggatctcgtcgtctacgggacgccgatcgagcggg 16617865

                                                                            
Query: 762      aggaggacacctccgcctgcaagcgtcgggctgtcgccgacgcaggccagctccgcgccc 821
                ||||||||||||||||  ||||||| ||||| |||||||| || ||||||||||||||||
Sbjct: 16617864 aggaggacacctccgcacgcaagcgccgggccgtcgccgaggccggccagctccgcgccc 16617805

                                     
Query: 822      tccccacatggaagcaggagg 842
                ||||| | |||||||||||||
Sbjct: 16617804 tccccgcctggaagcaggagg 16617784


>dbj|AP004728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0583E12
          Length = 152449

 Score =  161 bits (81), Expect = 8e-36
 Identities = 126/141 (89%)
 Strand = Plus / Minus

                                                                          
Query: 702    ccatggcgttcgatgacgacaaggaggatctcgtggtctacgggacgccaatcgagcgag 761
              |||||| |||||| |||||| | ||||||||||| |||||||||||||| |||||||| |
Sbjct: 113904 ccatggggttcgacgacgacgacgaggatctcgtcgtctacgggacgccgatcgagcggg 113845

                                                                          
Query: 762    aggaggacacctccgcctgcaagcgtcgggctgtcgccgacgcaggccagctccgcgccc 821
              ||||||||||||||||  ||||||| ||||| |||||||| || ||||||||||||||||
Sbjct: 113844 aggaggacacctccgcacgcaagcgccgggccgtcgccgaggccggccagctccgcgccc 113785

                                   
Query: 822    tccccacatggaagcaggagg 842
              ||||| | |||||||||||||
Sbjct: 113784 tccccgcctggaagcaggagg 113764