BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst034l15 (1098 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001052395.1| Oryza sativa (japonica cultivar-group) Os02g... 440 e-120 dbj|AK099428.1| Oryza sativa (japonica cultivar-group) cDNA clon... 432 e-117 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 196 1e-46 dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic D... 196 1e-46 dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic D... 123 2e-24 >ref|NM_001052395.1| Oryza sativa (japonica cultivar-group) Os02g0141500 (Os02g0141500) mRNA, complete cds Length = 1207 Score = 440 bits (222), Expect = e-120 Identities = 480/566 (84%) Strand = Plus / Plus Query: 193 cggatgatggtggggttcatggggaagaggaaggagctggatcaggttgttgacgacctc 252 ||||||||||||||||||||||||||||||||||||||||| ||||| || |||| |||| Sbjct: 179 cggatgatggtggggttcatggggaagaggaaggagctggaccaggtggtggacggcctc 238 Query: 253 tccgacttctccctctccggccccgccgccaagagccgcagattggacccggggctgcca 312 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 239 tccgacttctccctctccggccccgccgccaagagccgcagattggatattgggcttcca 298 Query: 313 cctattatggaagaagaaccaccagctccttccatctcatttcaccatgagttgctggga 372 ||||||||||||||||| | |||| ||||||||| ||||| |||||| |||| ||| Sbjct: 299 cctattatggaagaagagacgccaggtccttccatgccatttggacatgagatgctagga 358 Query: 373 gaggaaatcaacagtggtgttagcatgcccagtgtggaagacatgatggaaggtgccatg 432 ||||||||| |||||| |||||||||||||| | | ||||||||| ||| |||||||||| Sbjct: 359 gaggaaatccacagtgttgttagcatgcccattatagaagacatgctgggaggtgccatg 418 Query: 433 ccatctcatctgtctagcgaggacagggcacttgttttatacaagccagtagataaccct 492 |||||||| || || ||||||| ||||||||||||||||||| ||||||||||| || Sbjct: 419 gaatctcatccatcaagtgaggacaaggcacttgttttatacaagtcagtagataacact 478 Query: 493 gtactctttggtcctggtatctcaaaccattcaatcgtagtcagttcagacttgatacgt 552 | | | |||||||||| | ||| |||| ||||||| || ||||| |||||||||||||| Sbjct: 479 gcatgcattggtcctgggacctcgaacccttcaatcataatcagtccagacttgatacgt 538 Query: 553 ggtctaaagaatcaagctttcgatcaagggaactatcatgggctggacgacaattctcct 612 ||||||||||||| ||||| ||| |||||| ||| |||||||| ||||| |||||| Sbjct: 539 agtctaaagaatcaggcttttatgcaaaggaactttcacgggctggaggacaaatctcct 598 Query: 613 gggcgtagcaattgcttggctttagttccttgggtgccaccacatatcgctatgacatct 672 ||| | ||||| | ||||||||||||||||||| |||||||| || || | | |||| Sbjct: 599 gggtgcagcaacttcttggctttagttccttggacaccaccacaaattgccacggtatct 658 Query: 673 aattggtctgctacccaaccagaaaacacagaaacttttgaagtgccaatggaggctgat 732 |||||||||||| | | ||||||| | |||| || ||||||||||||||| ||||| Sbjct: 659 aattggtctgcttcagattcagaaaagagagaattcttcgaagtgccaatggagtctgat 718 Query: 733 gagacagaagttgtttcgatggacgt 758 ||||||||||| | ||| |||||||| Sbjct: 719 gagacagaagtcgattctatggacgt 744 >dbj|AK099428.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013011N11, full insert sequence Length = 1207 Score = 432 bits (218), Expect = e-117 Identities = 480/566 (84%), Gaps = 1/566 (0%) Strand = Plus / Plus Query: 193 cggatgatggtggggttcatggggaagaggaaggagctggatcaggttgttgacgacctc 252 ||||||||||||||||||||||||||||||||||||||||| ||||| || |||| |||| Sbjct: 180 cggatgatggtggggttcatggggaagaggaaggagctggaccaggtggtggacggcctc 239 Query: 253 tccgacttctccctctccggccccgccgccaagagccgcagattggacccggggctgcca 312 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 240 tccgacttctccctctccggccccgccgccaagagccgcagattggatattgggcttcca 299 Query: 313 cctattatggaagaagaaccaccagctccttccatctcatttcaccatgagttgctggga 372 ||||||||||||||||| | |||| ||||||||| ||||| |||||| |||| ||| Sbjct: 300 cctattatggaagaagagacgccaggtccttccatgccatttggacatgagatgctagga 359 Query: 373 gaggaaatcaacagtggtgttagcatgcccagtgtggaagacatgatggaaggtgccatg 432 ||||||||| |||||| |||||||||||||| | | ||||||||| ||| |||||||||| Sbjct: 360 gaggaaatccacagtgttgttagcatgcccattatagaagacatgctgggaggtgccatg 419 Query: 433 ccatctcatctgtctagcgaggacagggcacttgttttatacaagccagtagataaccct 492 |||||||| || || ||||||| ||||||||||||||||||| ||||||||||| || Sbjct: 420 gaatctcatccatcaagtgaggaca-ggcacttgttttatacaagtcagtagataacact 478 Query: 493 gtactctttggtcctggtatctcaaaccattcaatcgtagtcagttcagacttgatacgt 552 | | | |||||||||| | ||| |||| ||||||| || ||||| |||||||||||||| Sbjct: 479 gcatgcattggtcctgggacctcgaacccttcaatcataatcagtccagacttgatacgt 538 Query: 553 ggtctaaagaatcaagctttcgatcaagggaactatcatgggctggacgacaattctcct 612 ||||||||||||| ||||| ||| |||||| ||| |||||||| ||||| |||||| Sbjct: 539 agtctaaagaatcaggcttttatgcaaaggaactttcacgggctggaggacaaatctcct 598 Query: 613 gggcgtagcaattgcttggctttagttccttgggtgccaccacatatcgctatgacatct 672 ||| | ||||| | ||||||||||||||||||| |||||||| || || | | |||| Sbjct: 599 gggtgcagcaacttcttggctttagttccttggacaccaccacaaattgccacggtatct 658 Query: 673 aattggtctgctacccaaccagaaaacacagaaacttttgaagtgccaatggaggctgat 732 |||||||||||| | | ||||||| | |||| || ||||||||||||||| ||||| Sbjct: 659 aattggtctgcttcagattcagaaaagagagaattcttcgaagtgccaatggagtctgat 718 Query: 733 gagacagaagttgtttcgatggacgt 758 ||||||||||| | ||| |||||||| Sbjct: 719 gagacagaagtcgattctatggacgt 744 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 196 bits (99), Expect = 1e-46 Identities = 219/259 (84%) Strand = Plus / Minus Query: 304 gggctgccacctattatggaagaagaaccaccagctccttccatctcatttcaccatgag 363 ||||| |||||||||||||||||||| | |||| ||||||||| ||||| |||||| Sbjct: 2244490 gggcttccacctattatggaagaagagacgccaggtccttccatgccatttggacatgag 2244431 Query: 364 ttgctgggagaggaaatcaacagtggtgttagcatgcccagtgtggaagacatgatggaa 423 |||| |||||||||||| |||||| |||||||||||||| | | ||||||||| ||| | Sbjct: 2244430 atgctaggagaggaaatccacagtgttgttagcatgcccattatagaagacatgctggga 2244371 Query: 424 ggtgccatgccatctcatctgtctagcgaggacagggcacttgttttatacaagccagta 483 ||||||||| |||||||| || || ||||||| ||||||||||||||||||| ||||| Sbjct: 2244370 ggtgccatggaatctcatccatcaagtgaggacaaggcacttgttttatacaagtcagta 2244311 Query: 484 gataaccctgtactctttggtcctggtatctcaaaccattcaatcgtagtcagttcagac 543 |||||| ||| | | |||||||||| | ||| |||| ||||||| || ||||| ||||| Sbjct: 2244310 gataacactgcatgcattggtcctgggacctcgaacccttcaatcataatcagtccagac 2244251 Query: 544 ttgatacgtggtctaaaga 562 ||||||||| ||||||||| Sbjct: 2244250 ttgatacgtagtctaaaga 2244232 Score = 178 bits (90), Expect = 3e-41 Identities = 102/106 (96%) Strand = Plus / Minus Query: 193 cggatgatggtggggttcatggggaagaggaaggagctggatcaggttgttgacgacctc 252 ||||||||||||||||||||||||||||||||||||||||| ||||| || |||| |||| Sbjct: 2245991 cggatgatggtggggttcatggggaagaggaaggagctggaccaggtggtggacggcctc 2245932 Query: 253 tccgacttctccctctccggccccgccgccaagagccgcagattgg 298 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2245931 tccgacttctccctctccggccccgccgccaagagccgcagattgg 2245886 Score = 123 bits (62), Expect = 2e-24 Identities = 149/178 (83%) Strand = Plus / Minus Query: 581 ggaactatcatgggctggacgacaattctcctgggcgtagcaattgcttggctttagttc 640 |||||||||| |||||||| ||||| ||||||||| | ||||| | |||||||||||||| Sbjct: 32951780 ggaactatcacgggctggaggacaaatctcctgggtgcagcaacttcttggctttagttc 32951721 Query: 641 cttgggtgccaccacatatcgctatgacatctaattggtctgctacccaaccagaaaaca 700 ||||| ||||||||| || || | | |||||||||||||| || | | ||||||| | Sbjct: 32951720 cttggacgccaccacaaattgccacggcatctaattggtcttcttcagattcagaaaaga 32951661 Query: 701 cagaaacttttgaagtgccaatggaggctgatgagacagaagttgtttcgatggacgt 758 |||| |||||||||||||||||| |||||||||||||||| | ||| |||||||| Sbjct: 32951660 gagaattctttgaagtgccaatggagtctgatgagacagaagtcgattctatggacgt 32951603 >dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_E07 Length = 113187 Score = 196 bits (99), Expect = 1e-46 Identities = 219/259 (84%) Strand = Plus / Minus Query: 304 gggctgccacctattatggaagaagaaccaccagctccttccatctcatttcaccatgag 363 ||||| |||||||||||||||||||| | |||| ||||||||| ||||| |||||| Sbjct: 31439 gggcttccacctattatggaagaagagacgccaggtccttccatgccatttggacatgag 31380 Query: 364 ttgctgggagaggaaatcaacagtggtgttagcatgcccagtgtggaagacatgatggaa 423 |||| |||||||||||| |||||| |||||||||||||| | | ||||||||| ||| | Sbjct: 31379 atgctaggagaggaaatccacagtgttgttagcatgcccattatagaagacatgctggga 31320 Query: 424 ggtgccatgccatctcatctgtctagcgaggacagggcacttgttttatacaagccagta 483 ||||||||| |||||||| || || ||||||| ||||||||||||||||||| ||||| Sbjct: 31319 ggtgccatggaatctcatccatcaagtgaggacaaggcacttgttttatacaagtcagta 31260 Query: 484 gataaccctgtactctttggtcctggtatctcaaaccattcaatcgtagtcagttcagac 543 |||||| ||| | | |||||||||| | ||| |||| ||||||| || ||||| ||||| Sbjct: 31259 gataacactgcatgcattggtcctgggacctcgaacccttcaatcataatcagtccagac 31200 Query: 544 ttgatacgtggtctaaaga 562 ||||||||| ||||||||| Sbjct: 31199 ttgatacgtagtctaaaga 31181 Score = 178 bits (90), Expect = 3e-41 Identities = 102/106 (96%) Strand = Plus / Minus Query: 193 cggatgatggtggggttcatggggaagaggaaggagctggatcaggttgttgacgacctc 252 ||||||||||||||||||||||||||||||||||||||||| ||||| || |||| |||| Sbjct: 32940 cggatgatggtggggttcatggggaagaggaaggagctggaccaggtggtggacggcctc 32881 Query: 253 tccgacttctccctctccggccccgccgccaagagccgcagattgg 298 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32880 tccgacttctccctctccggccccgccgccaagagccgcagattgg 32835 >dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1534_E09 Length = 126209 Score = 123 bits (62), Expect = 2e-24 Identities = 149/178 (83%) Strand = Plus / Minus Query: 581 ggaactatcatgggctggacgacaattctcctgggcgtagcaattgcttggctttagttc 640 |||||||||| |||||||| ||||| ||||||||| | ||||| | |||||||||||||| Sbjct: 106521 ggaactatcacgggctggaggacaaatctcctgggtgcagcaacttcttggctttagttc 106462 Query: 641 cttgggtgccaccacatatcgctatgacatctaattggtctgctacccaaccagaaaaca 700 ||||| ||||||||| || || | | |||||||||||||| || | | ||||||| | Sbjct: 106461 cttggacgccaccacaaattgccacggcatctaattggtcttcttcagattcagaaaaga 106402 Query: 701 cagaaacttttgaagtgccaatggaggctgatgagacagaagttgtttcgatggacgt 758 |||| |||||||||||||||||| |||||||||||||||| | ||| |||||||| Sbjct: 106401 gagaattctttgaagtgccaatggagtctgatgagacagaagtcgattctatggacgt 106344