BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst034i21 (1227 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001057709.1| Oryza sativa (japonica cultivar-group) Os03g... 777 0.0 dbj|AK058575.1| Oryza sativa (japonica cultivar-group) cDNA clon... 777 0.0 emb|CT827986.1| Oryza sativa (indica cultivar-group) cDNA clone:... 519 e-144 gb|EF515854.1| Zea mays putative GRF-interacting factor 1 (GIF1)... 446 e-121 gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genom... 398 e-107 >ref|NM_001057709.1| Oryza sativa (japonica cultivar-group) Os03g0733600 (Os03g0733600) mRNA, complete cds Length = 1254 Score = 777 bits (392), Expect = 0.0 Identities = 616/691 (89%), Gaps = 21/691 (3%) Strand = Plus / Plus Query: 233 attgggatgcagcagcaacacctgatgcagatgaaccagagcatgatggggggctatgct 292 ||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 230 attggaatgcagcagcaacacctgatgcagatgaaccagggcatgatggggggatatgct 289 Query: 293 tcccctaccactgtcaccactgatctcattcagcagtacctggatgagaacaagcagctg 352 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 290 tcccctaccaccgtcaccactgatctcattcagcagtatctggatgagaacaagcagctg 349 Query: 353 atcctggccatcctcgacaaccagaacaacgggaaggtggaggagtgcgcacggaaccaa 412 |||||||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 350 atcctggccatccttgacaaccagaacaatgggaaggtggaagagtgcgctcggaaccaa 409 Query: 413 gctaagctccagcacaacctcatgtacctcgctgccatcgctgacagccagccgccgcag 472 ||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||| Sbjct: 410 gctaagctccagcacaatctcatgtacctcgccgccatcgccgacagccagccgccgcag 469 Query: 473 acggccgctctatcacagtacccgtcgaatctgatgatgcagtccgggccgaggtacatg 532 |||||||| | || ||||| |||||||| |||||||||||||||||| ||||||||||| Sbjct: 470 acggccgccatgtcccagtatccgtcgaacctgatgatgcagtccggggcgaggtacatg 529 Query: 533 ccgcagcagtcggcgcagatgatggccccgcagtcgctgatggcggcccggtcgtcgatg 592 |||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||| Sbjct: 530 ccgcagcagtcggcgcagatgatggcgccgcagtcgctgatggcggcgaggtcttcgatg 589 Query: 593 atgtacgcgcagcccaccctgtcgccgctc---------cagcagcagcaggcggctgcc 643 |||||||||||||| | |||||||||||| ||||||||||||||||| || Sbjct: 590 atgtacgcgcagccggcgctgtcgccgctccagcagcagcagcagcagcaggcggcggcg 649 Query: 644 gcgcacggccagctgggtatggcctc---cggcacgaccagcgggttcaacatcctccac 700 |||||||| |||||||| |||| ||| ||||| ||||||||||||| |||||||||| Sbjct: 650 gcgcacgggcagctgggcatgggctcggggggcaccaccagcgggttcagcatcctccac 709 Query: 701 ggcgaggccagcatgggcggcgcaggcgccgctg------ccggcaacagcatgatgaac 754 |||||||||||||||||||||| |||| || | |||| ||||||||||||||| Sbjct: 710 ggcgaggccagcatgggcggcggcggcggcggcggtggcgccggtaacagcatgatgaac 769 Query: 755 gccggcgtcttctcggactttg---gccgcagcgccagcggcgccaaggagggctcgacc 811 |||||||| ||||| ||||| | || || ||| | |||||| ||||||||| || ||| Sbjct: 770 gccggcgtgttctccgacttcggacgcggcggcggcggcggcggcaaggaggggtccacc 829 Query: 812 tcgctgtccgtcgacgtccggggcgccaactccggcgcgcagagcggcgatggggagtac 871 |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 830 tcgctgtccgtcgacgtccggggcgccaactccggcgcccagagcggcgacggggagtac 889 Query: 872 ctgaaaggcaccgaggaggaaggcagctagg 902 || || ||||||||||||||||||||||||| Sbjct: 890 ctcaagggcaccgaggaggaaggcagctagg 920 >dbj|AK058575.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-F01, full insert sequence Length = 1256 Score = 777 bits (392), Expect = 0.0 Identities = 616/691 (89%), Gaps = 21/691 (3%) Strand = Plus / Plus Query: 233 attgggatgcagcagcaacacctgatgcagatgaaccagagcatgatggggggctatgct 292 ||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 232 attggaatgcagcagcaacacctgatgcagatgaaccagggcatgatggggggatatgct 291 Query: 293 tcccctaccactgtcaccactgatctcattcagcagtacctggatgagaacaagcagctg 352 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 292 tcccctaccaccgtcaccactgatctcattcagcagtatctggatgagaacaagcagctg 351 Query: 353 atcctggccatcctcgacaaccagaacaacgggaaggtggaggagtgcgcacggaaccaa 412 |||||||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 352 atcctggccatccttgacaaccagaacaatgggaaggtggaagagtgcgctcggaaccaa 411 Query: 413 gctaagctccagcacaacctcatgtacctcgctgccatcgctgacagccagccgccgcag 472 ||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||| Sbjct: 412 gctaagctccagcacaatctcatgtacctcgccgccatcgccgacagccagccgccgcag 471 Query: 473 acggccgctctatcacagtacccgtcgaatctgatgatgcagtccgggccgaggtacatg 532 |||||||| | || ||||| |||||||| |||||||||||||||||| ||||||||||| Sbjct: 472 acggccgccatgtcccagtatccgtcgaacctgatgatgcagtccggggcgaggtacatg 531 Query: 533 ccgcagcagtcggcgcagatgatggccccgcagtcgctgatggcggcccggtcgtcgatg 592 |||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||| Sbjct: 532 ccgcagcagtcggcgcagatgatggcgccgcagtcgctgatggcggcgaggtcttcgatg 591 Query: 593 atgtacgcgcagcccaccctgtcgccgctc---------cagcagcagcaggcggctgcc 643 |||||||||||||| | |||||||||||| ||||||||||||||||| || Sbjct: 592 atgtacgcgcagccggcgctgtcgccgctccagcagcagcagcagcagcaggcggcggcg 651 Query: 644 gcgcacggccagctgggtatggcctc---cggcacgaccagcgggttcaacatcctccac 700 |||||||| |||||||| |||| ||| ||||| ||||||||||||| |||||||||| Sbjct: 652 gcgcacgggcagctgggcatgggctcggggggcaccaccagcgggttcagcatcctccac 711 Query: 701 ggcgaggccagcatgggcggcgcaggcgccgctg------ccggcaacagcatgatgaac 754 |||||||||||||||||||||| |||| || | |||| ||||||||||||||| Sbjct: 712 ggcgaggccagcatgggcggcggcggcggcggcggtggcgccggtaacagcatgatgaac 771 Query: 755 gccggcgtcttctcggactttg---gccgcagcgccagcggcgccaaggagggctcgacc 811 |||||||| ||||| ||||| | || || ||| | |||||| ||||||||| || ||| Sbjct: 772 gccggcgtgttctccgacttcggacgcggcggcggcggcggcggcaaggaggggtccacc 831 Query: 812 tcgctgtccgtcgacgtccggggcgccaactccggcgcgcagagcggcgatggggagtac 871 |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 832 tcgctgtccgtcgacgtccggggcgccaactccggcgcccagagcggcgacggggagtac 891 Query: 872 ctgaaaggcaccgaggaggaaggcagctagg 902 || || ||||||||||||||||||||||||| Sbjct: 892 ctcaagggcaccgaggaggaaggcagctagg 922 >emb|CT827986.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA046H19, full insert sequence Length = 1065 Score = 519 bits (262), Expect = e-144 Identities = 409/457 (89%), Gaps = 12/457 (2%) Strand = Plus / Plus Query: 327 agtacctggatgagaacaagcagctgatcctggccatcctcgacaaccagaacaacggga 386 |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 185 agtatctggatgagaacaagcagctgatcctggccatccttgacaaccagaacaatggga 244 Query: 387 aggtggaggagtgcgcacggaaccaagctaagctccagcacaacctcatgtacctcgctg 446 ||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||| | Sbjct: 245 aggtggaagagtgcgctcggaaccaagctaagctccagcacaatctcatgtacctcgccg 304 Query: 447 ccatcgctgacagccagccgccgcagacggccgctctatcacagtacccgtcgaatctga 506 ||||||| |||||||||||||||||||||||||| | || ||||| |||||||| |||| Sbjct: 305 ccatcgccgacagccagccgccgcagacggccgccatgtcccagtatccgtcgaacctga 364 Query: 507 tgatgcagtccgggccgaggtacatgccgcagcagtcggcgcagatgatggccccgcagt 566 |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 365 tgatgcagtccggggcgaggtacatgccgcagcagtcggcgcagatgatggcgccgcagt 424 Query: 567 cgctgatggcggcccggtcgtcgatgatgtacgcgcagcccaccctgtcgccgctc---- 622 ||||||||||||| ||||||||||||||||||||||||| | |||||||||||| Sbjct: 425 cgctgatggcggcgaggtcgtcgatgatgtacgcgcagccggcgctgtcgccgctccagc 484 Query: 623 --cagcagcagcaggcggctgccgcgcacggccagctgggtatggcctc---cggcacga 677 ||||||||||||||||| || |||||||| |||||||| |||| ||| ||||| | Sbjct: 485 agcagcagcagcaggcggcggcggcgcacgggcagctgggcatgggctcggggggcacca 544 Query: 678 ccagcgggttcaacatcctccacggcgaggccagcatgggcggcgcaggcgccgctgccg 737 |||||||||||| ||||||||||||||||||||||||||||||| |||| | |||| Sbjct: 545 ccagcgggttcagcatcctccacggcgaggccagcatgggcggc---ggcggtggcgccg 601 Query: 738 gcaacagcatgatgaacgccggcgtcttctcggactt 774 | ||||||||||||||||||||||| ||||| ||||| Sbjct: 602 gtaacagcatgatgaacgccggcgtgttctccgactt 638 Score = 174 bits (88), Expect = 5e-40 Identities = 109/116 (93%) Strand = Plus / Plus Query: 787 cagcggcgccaaggagggctcgacctcgctgtccgtcgacgtccggggcgccaactccgg 846 |||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 663 cagcggcggcaaggaggggtccacctcgctgtccgtcgacgtccggggcgccaactccgg 722 Query: 847 cgcgcagagcggcgatggggagtacctgaaaggcaccgaggaggaaggcagctagg 902 ||| ||||||||||| ||||||||||| || ||||||||||||||||||||||||| Sbjct: 723 cgcccagagcggcgacggggagtacctcaagggcaccgaggaggaaggcagctagg 778 >gb|EF515854.1| Zea mays putative GRF-interacting factor 1 (GIF1) mRNA, complete cds Length = 850 Score = 446 bits (225), Expect = e-121 Identities = 357/401 (89%) Strand = Plus / Plus Query: 239 atgcagcagcaacacctgatgcagatgaaccagagcatgatggggggctatgcttcccct 298 |||||||||||||||||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 138 atgcagcagcaacacctgatgcagatgaaccagaacatgatggggggctacacctctcct 197 Query: 299 accactgtcaccactgatctcattcagcagtacctggatgagaacaagcagctgatcctg 358 || | || ||||| |||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 198 gccgccgtgaccaccgatctcatccagcagtacctggacgagaacaagcagctgatcctg 257 Query: 359 gccatcctcgacaaccagaacaacgggaaggtggaggagtgcgcacggaaccaagctaag 418 ||||||||||||||||||||||| || |||| ||||||||||| |||| ||||||||||| Sbjct: 258 gccatcctcgacaaccagaacaatggcaaggcggaggagtgcgaacggcaccaagctaag 317 Query: 419 ctccagcacaacctcatgtacctcgctgccatcgctgacagccagccgccgcagacggcc 478 ||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| || Sbjct: 318 ctccagcacaacctcatgtacctggccgccatcgctgacagccagccgccacagaccgcg 377 Query: 479 gctctatcacagtacccgtcgaatctgatgatgcagtccgggccgaggtacatgccgcag 538 | ||||||||||||||||| || |||||||||||| | || || |||||||||| | | Sbjct: 378 ccactatcacagtacccgtccaacctgatgatgcagccgggccctcggtacatgccaccg 437 Query: 539 cagtcggcgcagatgatggccccgcagtcgctgatggcggcccggtcgtcgatgatgtac 598 ||||| | |||||||||| ||||||||||||||||||||| ||||| || ||||||||| Sbjct: 438 cagtccgggcagatgatgaacccgcagtcgctgatggcggcgcggtcctccatgatgtac 497 Query: 599 gcgcagcccaccctgtcgccgctccagcagcagcaggcggc 639 ||||| || |||||||||| |||||||||||||||||||| Sbjct: 498 gcgcacccgtccctgtcgccactccagcagcagcaggcggc 538 Score = 184 bits (93), Expect = 6e-43 Identities = 204/240 (85%), Gaps = 12/240 (5%) Strand = Plus / Plus Query: 670 cggcacgaccagcgggttcaacatcctccacggcgaggccagcatgggcggcg------c 723 |||||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct: 578 cggcacgaccagcgggttcagcatcctccacggcgaggccagcatgggcggtggtggtgc 637 Query: 724 aggcgccgctgccggcaacagcatgatgaacgccggcgtcttctcggactttggccgcag 783 ||||| | |||||||||| |||||||||||||||| | ||||||| |||||||||||| Sbjct: 638 tggcgcaggcgccggcaacaacatgatgaacgccggcatgttctcgggctttggccgcag 697 Query: 784 cgccagcggcgccaaggagggctcgacctcgctgtccgtcgacgtccggggcg---ccaa 840 || ||| ||||||||||| || |||||||| ||||| || ||||||||||| | ||| Sbjct: 698 cggcagtggcgccaaggaagggtcgacctctctgtcggttgacgtccggggtggaaccag 757 Query: 841 ctccggcgcgcagagcggcgatggggagtacctgaaa---ggcaccgaggaggaaggcag 897 |||||||||||||||||| || || |||||||| ||| ||||||||||| |||||||| Sbjct: 758 ctccggcgcgcagagcggggacggcgagtacctcaaagtcggcaccgaggaagaaggcag 817 >gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genomic sequence, complete sequence Length = 112892 Score = 398 bits (201), Expect = e-107 Identities = 377/436 (86%), Gaps = 21/436 (4%) Strand = Plus / Plus Query: 488 cagtacccgtcgaatctgatgatgcagtccgggccgaggtacatgccgcagcagtcggcg 547 ||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 95821 cagtatccgtcgaacctgatgatgcagtccggggcgaggtacatgccgcagcagtcggcg 95880 Query: 548 cagatgatggccccgcagtcgctgatggcggcccggtcgtcgatgatgtacgcgcagccc 607 ||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 95881 cagatgatggcgccgcagtcgctgatggcggcgaggtcttcgatgatgtacgcgcagccg 95940 Query: 608 accctgtcgccgctc---------cagcagcagcaggcggctgccgcgcacggccagctg 658 | |||||||||||| ||||||||||||||||| || |||||||| |||||| Sbjct: 95941 gcgctgtcgccgctccagcagcagcagcagcagcaggcggcggcggcgcacgggcagctg 96000 Query: 659 ggtatggcctc---cggcacgaccagcgggttcaacatcctccacggcgaggccagcatg 715 || |||| ||| ||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 96001 ggcatgggctcggggggcaccaccagcgggttcagcatcctccacggcgaggccagcatg 96060 Query: 716 ggcggcgcaggcgccgctg------ccggcaacagcatgatgaacgccggcgtcttctcg 769 ||||||| |||| || | |||| ||||||||||||||||||||||| ||||| Sbjct: 96061 ggcggcggcggcggcggcggtggcgccggtaacagcatgatgaacgccggcgtgttctcc 96120 Query: 770 gactttg---gccgcagcgccagcggcgccaaggagggctcgacctcgctgtccgtcgac 826 ||||| | || || ||| | |||||| ||||||||| || |||||||||||||||||| Sbjct: 96121 gacttcggacgcggcggcggcggcggcggcaaggaggggtccacctcgctgtccgtcgac 96180 Query: 827 gtccggggcgccaactccggcgcgcagagcggcgatggggagtacctgaaaggcaccgag 886 ||||||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||| Sbjct: 96181 gtccggggcgccaactccggcgcccagagcggcgacggggagtacctcaagggcaccgag 96240 Query: 887 gaggaaggcagctagg 902 |||||||||||||||| Sbjct: 96241 gaggaaggcagctagg 96256 Score = 159 bits (80), Expect = 3e-35 Identities = 92/96 (95%) Strand = Plus / Plus Query: 233 attgggatgcagcagcaacacctgatgcagatgaaccagagcatgatggggggctatgct 292 ||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 93205 attggaatgcagcagcaacacctgatgcagatgaaccagggcatgatggggggatatgct 93264 Query: 293 tcccctaccactgtcaccactgatctcattcagcag 328 ||||||||||| |||||||||||||||||||||||| Sbjct: 93265 tcccctaccaccgtcaccactgatctcattcagcag 93300 Score = 127 bits (64), Expect = 1e-25 Identities = 73/76 (96%) Strand = Plus / Plus Query: 405 ggaaccaagctaagctccagcacaacctcatgtacctcgctgccatcgctgacagccagc 464 ||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||| Sbjct: 95637 ggaaccaagctaagctccagcacaatctcatgtacctcgccgccatcgccgacagccagc 95696 Query: 465 cgccgcagacggccgc 480 |||||||||||||||| Sbjct: 95697 cgccgcagacggccgc 95712 Score = 123 bits (62), Expect = 2e-24 Identities = 74/78 (94%) Strand = Plus / Plus Query: 325 gcagtacctggatgagaacaagcagctgatcctggccatcctcgacaaccagaacaacgg 384 |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 94814 gcagtatctggatgagaacaagcagctgatcctggccatccttgacaaccagaacaatgg 94873 Query: 385 gaaggtggaggagtgcgc 402 ||||||||| |||||||| Sbjct: 94874 gaaggtggaagagtgcgc 94891