BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst034f11 (1212 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 236 2e-58 dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic D... 236 2e-58 dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic D... 236 2e-58 >dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 236 bits (119), Expect = 2e-58 Identities = 158/171 (92%) Strand = Plus / Minus Query: 122 aggatggcgagcggacaaggatgctttgatccggatactgggccggagaacggcggcgca 181 ||||||| |||||||||||| || ||| |||||| ||| ||||| ||||||||||||| Sbjct: 27748383 aggatggagagcggacaagggcgccctgacccggatcctgtgccggcgaacggcggcgca 27748324 Query: 182 gcgagcggcgatacgccgcgcctacgccttcctctacagggagtccctcctcaactgctt 241 ||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 27748323 gcgggcggcgatacgccgcgcctacgccttcctctaccgggagcccctcctcaactgctt 27748264 Query: 242 ccgctacaagctctcccgccattgcctcctctccgtcgatttctgggtact 292 |||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 27748263 ccgctacaagctctcccgccattgcctcctctccctcgatttctgggtact 27748213 Score = 159 bits (80), Expect = 3e-35 Identities = 158/184 (85%) Strand = Plus / Minus Query: 898 aggtcatcaggcattcgatcttaggattgggaacttacgaggacatgcttaccagggtaa 957 |||| |||||||| |||||||| |||||||| || |||||||||||||| ||||| |||| Sbjct: 27747182 aggtgatcaggcactcgatcttgggattggggacgtacgaggacatgctcaccagagtaa 27747123 Query: 958 tcgtgtcgcgagcggaaatcgacatgaaacagatcaaacaagagtacaagatcaggtaca 1017 |||||||||| || || |||||||||| ||| |||| | ||||||||| ||||||||| Sbjct: 27747122 tcgtgtcgcgtgctgagatcgacatgagacacatcagggaggagtacaaggtcaggtaca 27747063 Query: 1018 agaccactgtcactcgagacgtcgtcgacgacacctccttcggctaccaggacatcttgc 1077 ||||||| |||||||| |||||||||| |||||| || ||||| ||| ||| | |||||| Sbjct: 27747062 agaccaccgtcactcgcgacgtcgtcggcgacacatcgttcggttacaagggcttcttgc 27747003 Query: 1078 tggc 1081 |||| Sbjct: 27747002 tggc 27746999 Score = 97.6 bits (49), Expect = 1e-16 Identities = 76/85 (89%) Strand = Plus / Minus Query: 817 acagccattgcagcagccagtttgccaagatgctgaagagtgccgtctggtgcataacat 876 |||||||||||| | ||||||||| || ||||||||||| ||||| |||||| |||||| Sbjct: 27747362 acagccattgcatcggccagtttggcaggatgctgaagaccgccgtgtggtgcttaacat 27747303 Query: 877 cacctgaaaagcactttgcagaggt 901 |||||||||| |||||||||||||| Sbjct: 27747302 cacctgaaaaacactttgcagaggt 27747278 Score = 81.8 bits (41), Expect = 6e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 44 gatcatgtccaccgtagccgttccgagccccctgccgtccgcctccgacgacgccgagag 103 ||||||||||| | ||||| ||||||||| | |||||||||||||||||||||||||| Sbjct: 27748836 gatcatgtccatcaatgccgtcccgagccccgtcccgtccgcctccgacgacgccgagag 27748777 Query: 104 ccttaggaaggcactccaagg 124 ||| |||||||| || ||||| Sbjct: 27748776 cctcaggaaggcgcttcaagg 27748756 >dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 236 bits (119), Expect = 2e-58 Identities = 158/171 (92%) Strand = Plus / Minus Query: 122 aggatggcgagcggacaaggatgctttgatccggatactgggccggagaacggcggcgca 181 ||||||| |||||||||||| || ||| |||||| ||| ||||| ||||||||||||| Sbjct: 127485 aggatggagagcggacaagggcgccctgacccggatcctgtgccggcgaacggcggcgca 127426 Query: 182 gcgagcggcgatacgccgcgcctacgccttcctctacagggagtccctcctcaactgctt 241 ||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 127425 gcgggcggcgatacgccgcgcctacgccttcctctaccgggagcccctcctcaactgctt 127366 Query: 242 ccgctacaagctctcccgccattgcctcctctccgtcgatttctgggtact 292 |||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 127365 ccgctacaagctctcccgccattgcctcctctccctcgatttctgggtact 127315 Score = 159 bits (80), Expect = 3e-35 Identities = 158/184 (85%) Strand = Plus / Minus Query: 898 aggtcatcaggcattcgatcttaggattgggaacttacgaggacatgcttaccagggtaa 957 |||| |||||||| |||||||| |||||||| || |||||||||||||| ||||| |||| Sbjct: 126284 aggtgatcaggcactcgatcttgggattggggacgtacgaggacatgctcaccagagtaa 126225 Query: 958 tcgtgtcgcgagcggaaatcgacatgaaacagatcaaacaagagtacaagatcaggtaca 1017 |||||||||| || || |||||||||| ||| |||| | ||||||||| ||||||||| Sbjct: 126224 tcgtgtcgcgtgctgagatcgacatgagacacatcagggaggagtacaaggtcaggtaca 126165 Query: 1018 agaccactgtcactcgagacgtcgtcgacgacacctccttcggctaccaggacatcttgc 1077 ||||||| |||||||| |||||||||| |||||| || ||||| ||| ||| | |||||| Sbjct: 126164 agaccaccgtcactcgcgacgtcgtcggcgacacatcgttcggttacaagggcttcttgc 126105 Query: 1078 tggc 1081 |||| Sbjct: 126104 tggc 126101 Score = 97.6 bits (49), Expect = 1e-16 Identities = 76/85 (89%) Strand = Plus / Minus Query: 817 acagccattgcagcagccagtttgccaagatgctgaagagtgccgtctggtgcataacat 876 |||||||||||| | ||||||||| || ||||||||||| ||||| |||||| |||||| Sbjct: 126464 acagccattgcatcggccagtttggcaggatgctgaagaccgccgtgtggtgcttaacat 126405 Query: 877 cacctgaaaagcactttgcagaggt 901 |||||||||| |||||||||||||| Sbjct: 126404 cacctgaaaaacactttgcagaggt 126380 Score = 81.8 bits (41), Expect = 6e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 44 gatcatgtccaccgtagccgttccgagccccctgccgtccgcctccgacgacgccgagag 103 ||||||||||| | ||||| ||||||||| | |||||||||||||||||||||||||| Sbjct: 127938 gatcatgtccatcaatgccgtcccgagccccgtcccgtccgcctccgacgacgccgagag 127879 Query: 104 ccttaggaaggcactccaagg 124 ||| |||||||| || ||||| Sbjct: 127878 cctcaggaaggcgcttcaagg 127858 >dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496C02 Length = 148419 Score = 236 bits (119), Expect = 2e-58 Identities = 158/171 (92%) Strand = Plus / Minus Query: 122 aggatggcgagcggacaaggatgctttgatccggatactgggccggagaacggcggcgca 181 ||||||| |||||||||||| || ||| |||||| ||| ||||| ||||||||||||| Sbjct: 40762 aggatggagagcggacaagggcgccctgacccggatcctgtgccggcgaacggcggcgca 40703 Query: 182 gcgagcggcgatacgccgcgcctacgccttcctctacagggagtccctcctcaactgctt 241 ||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 40702 gcgggcggcgatacgccgcgcctacgccttcctctaccgggagcccctcctcaactgctt 40643 Query: 242 ccgctacaagctctcccgccattgcctcctctccgtcgatttctgggtact 292 |||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 40642 ccgctacaagctctcccgccattgcctcctctccctcgatttctgggtact 40592 Score = 159 bits (80), Expect = 3e-35 Identities = 158/184 (85%) Strand = Plus / Minus Query: 898 aggtcatcaggcattcgatcttaggattgggaacttacgaggacatgcttaccagggtaa 957 |||| |||||||| |||||||| |||||||| || |||||||||||||| ||||| |||| Sbjct: 39561 aggtgatcaggcactcgatcttgggattggggacgtacgaggacatgctcaccagagtaa 39502 Query: 958 tcgtgtcgcgagcggaaatcgacatgaaacagatcaaacaagagtacaagatcaggtaca 1017 |||||||||| || || |||||||||| ||| |||| | ||||||||| ||||||||| Sbjct: 39501 tcgtgtcgcgtgctgagatcgacatgagacacatcagggaggagtacaaggtcaggtaca 39442 Query: 1018 agaccactgtcactcgagacgtcgtcgacgacacctccttcggctaccaggacatcttgc 1077 ||||||| |||||||| |||||||||| |||||| || ||||| ||| ||| | |||||| Sbjct: 39441 agaccaccgtcactcgcgacgtcgtcggcgacacatcgttcggttacaagggcttcttgc 39382 Query: 1078 tggc 1081 |||| Sbjct: 39381 tggc 39378 Score = 97.6 bits (49), Expect = 1e-16 Identities = 76/85 (89%) Strand = Plus / Minus Query: 817 acagccattgcagcagccagtttgccaagatgctgaagagtgccgtctggtgcataacat 876 |||||||||||| | ||||||||| || ||||||||||| ||||| |||||| |||||| Sbjct: 39741 acagccattgcatcggccagtttggcaggatgctgaagaccgccgtgtggtgcttaacat 39682 Query: 877 cacctgaaaagcactttgcagaggt 901 |||||||||| |||||||||||||| Sbjct: 39681 cacctgaaaaacactttgcagaggt 39657 Score = 81.8 bits (41), Expect = 6e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 44 gatcatgtccaccgtagccgttccgagccccctgccgtccgcctccgacgacgccgagag 103 ||||||||||| | ||||| ||||||||| | |||||||||||||||||||||||||| Sbjct: 41215 gatcatgtccatcaatgccgtcccgagccccgtcccgtccgcctccgacgacgccgagag 41156 Query: 104 ccttaggaaggcactccaagg 124 ||| |||||||| || ||||| Sbjct: 41155 cctcaggaaggcgcttcaagg 41135