BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst034d13
         (639 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AK242745.1| Oryza sativa (japonica cultivar-group) cDNA, clo...   161   4e-36
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...   161   4e-36
dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic D...   161   4e-36
ref|NM_001053133.1| Oryza sativa (japonica cultivar-group) Os02g...   151   4e-33
ref|NM_001054809.1| Oryza sativa (japonica cultivar-group) Os02g...    96   2e-16

>dbj|AK242745.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090050D05,
           full insert sequence
          Length = 2215

 Score =  161 bits (81), Expect = 4e-36
 Identities = 170/199 (85%), Gaps = 3/199 (1%)
 Strand = Plus / Plus

                                                                       
Query: 180 gtctgccatggagtgcagctccgacgagtcatcagagctaagtgatacagatatcgatga 239
           |||||||||||| | || |||||||||||||   |||||||||||| ||||||| |||||
Sbjct: 56  gtctgccatggatttcacctccgacgagtca---gagctaagtgatgcagatattgatga 112

                                                                       
Query: 240 ctatgctgagaagtcttacatggacctgaaggccggcaagcttgtggcaaggctaggcaa 299
           ||||||||| ||||  ||||||||||| ||| | || ||||  ||||  || ||||||||
Sbjct: 113 ctatgctgacaagtgctacatggacctcaagtctgggaagccggtggtgagtctaggcaa 172

                                                                       
Query: 300 tgataggtttagatgcccgttctgtccggggaagaagaagcaggactaccgttacactga 359
           ||| | ||| |||||||| ||||||| |||||||||||||||||||||||||||||  ||
Sbjct: 173 tgaaaagttcagatgcccattctgtctggggaagaagaagcaggactaccgttacaacga 232

                              
Query: 360 gttgcttcagcatgccatt 378
           | | |||||||||||||||
Sbjct: 233 gctacttcagcatgccatt 251


>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score =  161 bits (81), Expect = 4e-36
 Identities = 170/199 (85%), Gaps = 3/199 (1%)
 Strand = Plus / Plus

                                                                            
Query: 180      gtctgccatggagtgcagctccgacgagtcatcagagctaagtgatacagatatcgatga 239
                |||||||||||| | || |||||||||||||   |||||||||||| ||||||| |||||
Sbjct: 11152711 gtctgccatggatttcacctccgacgagtca---gagctaagtgatgcagatattgatga 11152767

                                                                            
Query: 240      ctatgctgagaagtcttacatggacctgaaggccggcaagcttgtggcaaggctaggcaa 299
                ||||||||| ||||  ||||||||||| ||| | || ||||  ||||  || ||||||||
Sbjct: 11152768 ctatgctgacaagtgctacatggacctcaagtctgggaagccggtggtgagtctaggcaa 11152827

                                                                            
Query: 300      tgataggtttagatgcccgttctgtccggggaagaagaagcaggactaccgttacactga 359
                ||| | ||| |||||||| ||||||| |||||||||||||||||||||||||||||  ||
Sbjct: 11152828 tgaaaagttcagatgcccattctgtctggggaagaagaagcaggactaccgttacaacga 11152887

                                   
Query: 360      gttgcttcagcatgccatt 378
                | | |||||||||||||||
Sbjct: 11152888 gctacttcagcatgccatt 11152906



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                            
Query: 111      ccggccatggcggcgtcgctgcttctccgagccgtgcgccgccgagacctcgcctcgcct 170
                ||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||| 
Sbjct: 32711404 ccggccatggcggcgtcgctgcttctccgagccgcccgccggcgagacctcgcctcgccc 32711345

                        
Query: 171      ttcggaac 178
                 |||||||
Sbjct: 32711344 ctcggaac 32711337


>dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1057_D08
          Length = 119557

 Score =  161 bits (81), Expect = 4e-36
 Identities = 170/199 (85%), Gaps = 3/199 (1%)
 Strand = Plus / Plus

                                                                         
Query: 180   gtctgccatggagtgcagctccgacgagtcatcagagctaagtgatacagatatcgatga 239
             |||||||||||| | || |||||||||||||   |||||||||||| ||||||| |||||
Sbjct: 71890 gtctgccatggatttcacctccgacgagtca---gagctaagtgatgcagatattgatga 71946

                                                                         
Query: 240   ctatgctgagaagtcttacatggacctgaaggccggcaagcttgtggcaaggctaggcaa 299
             ||||||||| ||||  ||||||||||| ||| | || ||||  ||||  || ||||||||
Sbjct: 71947 ctatgctgacaagtgctacatggacctcaagtctgggaagccggtggtgagtctaggcaa 72006

                                                                         
Query: 300   tgataggtttagatgcccgttctgtccggggaagaagaagcaggactaccgttacactga 359
             ||| | ||| |||||||| ||||||| |||||||||||||||||||||||||||||  ||
Sbjct: 72007 tgaaaagttcagatgcccattctgtctggggaagaagaagcaggactaccgttacaacga 72066

                                
Query: 360   gttgcttcagcatgccatt 378
             | | |||||||||||||||
Sbjct: 72067 gctacttcagcatgccatt 72085


>ref|NM_001053133.1| Oryza sativa (japonica cultivar-group) Os02g0293300 (Os02g0293300)
           mRNA, complete cds
          Length = 1887

 Score =  151 bits (76), Expect = 4e-33
 Identities = 145/168 (86%)
 Strand = Plus / Plus

                                                                       
Query: 211 tcagagctaagtgatacagatatcgatgactatgctgagaagtcttacatggacctgaag 270
           ||||||||||||||| ||||||| |||||||||||||| ||||  ||||||||||| |||
Sbjct: 22  tcagagctaagtgatgcagatattgatgactatgctgacaagtgctacatggacctcaag 81

                                                                       
Query: 271 gccggcaagcttgtggcaaggctaggcaatgataggtttagatgcccgttctgtccgggg 330
            | || ||||  ||||  || ||||||||||| | ||| |||||||| ||||||| ||||
Sbjct: 82  tctgggaagccggtggtgagtctaggcaatgaaaagttcagatgcccattctgtctgggg 141

                                                           
Query: 331 aagaagaagcaggactaccgttacactgagttgcttcagcatgccatt 378
           |||||||||||||||||||||||||  ||| | |||||||||||||||
Sbjct: 142 aagaagaagcaggactaccgttacaacgagctacttcagcatgccatt 189


>ref|NM_001054809.1| Oryza sativa (japonica cultivar-group) Os02g0774300 (Os02g0774300)
           mRNA, complete cds
          Length = 2394

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                       
Query: 111 ccggccatggcggcgtcgctgcttctccgagccgtgcgccgccgagacctcgcctcgcct 170
           ||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||| 
Sbjct: 80  ccggccatggcggcgtcgctgcttctccgagccgcccgccggcgagacctcgcctcgccc 139

                   
Query: 171 ttcggaac 178
            |||||||
Sbjct: 140 ctcggaac 147