BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst033p18 (716 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001059288.1| Oryza sativa (japonica cultivar-group) Os04g... 182 1e-42 emb|CR855098.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 107 6e-20 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 107 6e-20 emb|AL662945.3|OSJN00141 Oryza sativa genomic DNA, chromosome 4,... 107 6e-20 emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4,... 107 6e-20 >ref|NM_001059288.1| Oryza sativa (japonica cultivar-group) Os04g0414300 (Os04g0414300) mRNA, complete cds Length = 1218 Score = 182 bits (92), Expect = 1e-42 Identities = 200/236 (84%) Strand = Plus / Plus Query: 206 cgcgcgccccctgctcctcacgcactctcgcggcatcgcctacaaactcttcatcggagg 265 |||||||||| | |||||||||||||| || |||||| |||||| |||||||||||||| Sbjct: 945 cgcgcgccccttcctcctcacgcactcccggggcatcacctacaggctcttcatcggagg 1004 Query: 266 tctatcacaatttgcaacggaagacagcctagcagaagctttctcgcgatacggccaagt 325 || || ||||| || || || || ||||| |||||||||||||| | || ||||| || Sbjct: 1005 gctgtcccaattcgcgaccgaggatagcctggcagaagctttctctcagtatggccaggt 1064 Query: 326 aatagaagcaacgattgtgactgataaggtgaccaacagaccaaaaggattcggctttgt 385 | |||||||||| ||||| || |||||| ||||||||||||||||||||||||||||||| Sbjct: 1065 actagaagcaacaattgtcaccgataagatgaccaacagaccaaaaggattcggctttgt 1124 Query: 386 gaaatttgcctctgaggaagaagcccataatgcacgggacgagatgaatggcaagg 441 |||||||||||| || |||| ||| |||| ||| ||| |||||||| ||||||| Sbjct: 1125 gaaatttgcctccgaagaagccgccaataaagcaaaggaagagatgaacggcaagg 1180 >emb|CR855098.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0622F05, complete sequence Length = 69925 Score = 107 bits (54), Expect = 6e-20 Identities = 96/110 (87%) Strand = Plus / Plus Query: 332 agcaacgattgtgactgataaggtgaccaacagaccaaaaggattcggctttgtgaaatt 391 |||||| ||||| || |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 17670 agcaacaattgtcaccgataagatgaccaacagaccaaaaggattcggctttgtgaaatt 17729 Query: 392 tgcctctgaggaagaagcccataatgcacgggacgagatgaatggcaagg 441 |||||| || |||| ||| |||| ||| ||| |||||||| ||||||| Sbjct: 17730 tgcctccgaagaagccgccaataaagcaaaggaagagatgaacggcaagg 17779 Score = 77.8 bits (39), Expect = 5e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 439 aggtattgaacggccgagttatatatgtcgacattgcaaaggccaaa 485 |||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 17999 aggtattgaacggccgagttatctatgtcgacattgcgaaggccaaa 18045 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 107 bits (54), Expect = 6e-20 Identities = 96/110 (87%) Strand = Plus / Plus Query: 332 agcaacgattgtgactgataaggtgaccaacagaccaaaaggattcggctttgtgaaatt 391 |||||| ||||| || |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 20493743 agcaacaattgtcaccgataagatgaccaacagaccaaaaggattcggctttgtgaaatt 20493802 Query: 392 tgcctctgaggaagaagcccataatgcacgggacgagatgaatggcaagg 441 |||||| || |||| ||| |||| ||| ||| |||||||| ||||||| Sbjct: 20493803 tgcctccgaagaagccgccaataaagcaaaggaagagatgaacggcaagg 20493852 Score = 77.8 bits (39), Expect = 5e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 439 aggtattgaacggccgagttatatatgtcgacattgcaaaggccaaa 485 |||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 20494072 aggtattgaacggccgagttatctatgtcgacattgcgaaggccaaa 20494118 >emb|AL662945.3|OSJN00141 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000126_13, complete sequence Length = 113960 Score = 107 bits (54), Expect = 6e-20 Identities = 96/110 (87%) Strand = Plus / Plus Query: 332 agcaacgattgtgactgataaggtgaccaacagaccaaaaggattcggctttgtgaaatt 391 |||||| ||||| || |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 107163 agcaacaattgtcaccgataagatgaccaacagaccaaaaggattcggctttgtgaaatt 107222 Query: 392 tgcctctgaggaagaagcccataatgcacgggacgagatgaatggcaagg 441 |||||| || |||| ||| |||| ||| ||| |||||||| ||||||| Sbjct: 107223 tgcctccgaagaagccgccaataaagcaaaggaagagatgaacggcaagg 107272 Score = 77.8 bits (39), Expect = 5e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 439 aggtattgaacggccgagttatatatgtcgacattgcaaaggccaaa 485 |||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 107492 aggtattgaacggccgagttatctatgtcgacattgcgaaggccaaa 107538 >emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12, complete sequence Length = 116952 Score = 107 bits (54), Expect = 6e-20 Identities = 96/110 (87%) Strand = Plus / Plus Query: 332 agcaacgattgtgactgataaggtgaccaacagaccaaaaggattcggctttgtgaaatt 391 |||||| ||||| || |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 4371 agcaacaattgtcaccgataagatgaccaacagaccaaaaggattcggctttgtgaaatt 4430 Query: 392 tgcctctgaggaagaagcccataatgcacgggacgagatgaatggcaagg 441 |||||| || |||| ||| |||| ||| ||| |||||||| ||||||| Sbjct: 4431 tgcctccgaagaagccgccaataaagcaaaggaagagatgaacggcaagg 4480 Score = 77.8 bits (39), Expect = 5e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 439 aggtattgaacggccgagttatatatgtcgacattgcaaaggccaaa 485 |||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 4700 aggtattgaacggccgagttatctatgtcgacattgcgaaggccaaa 4746