BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst033g09 (937 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001049855.1| Oryza sativa (japonica cultivar-group) Os01g... 833 0.0 dbj|AK068308.1| Oryza sativa (japonica cultivar-group) cDNA clon... 825 0.0 gb|DQ246208.1| Zea mays clone 22109 mRNA sequence 644 0.0 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 422 e-114 dbj|AP003902.3| Oryza sativa (japonica cultivar-group) genomic D... 422 e-114 >ref|NM_001049855.1| Oryza sativa (japonica cultivar-group) Os01g0555300 (Os01g0555300) mRNA, complete cds Length = 948 Score = 833 bits (420), Expect = 0.0 Identities = 576/628 (91%) Strand = Plus / Plus Query: 123 ggtgggcggcggcgggtggacgagccgccggatttccatctacgcctcccgcgtcttctt 182 ||||||||| ||| ||||||||||||||||||| || ||||||||||||||| |||||| Sbjct: 142 ggtgggcgggggccggtggacgagccgccggatatcgttctacgcctcccgcgccttctt 201 Query: 183 cctgctcatcatcctccagatcccgctcttcagggtcccttgtagagcaggcacatgcac 242 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 cctcctcatcatcctccagatcccgctcttcagggtcccttgtagagcaggcacatgcac 261 Query: 243 aacaccaattcaagttacatcttcgcagttggtctcaaatgagatatttccaccatctgt 302 ||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 262 aacgcccattcaagttacatcttcgcagttggtctcaaatgagatattcccaccatctgt 321 Query: 303 tgtgaaggccatgctctaccctagtgctatagtgagcagcctcactaaaagcatgacatt 362 |||||| ||| | |||| |||| | ||||||| |||| ||| ||||| ||||||||||| Sbjct: 322 tgtgaaagcccttctcttccctggggctatagcaagcaaccttactaagagcatgacatt 381 Query: 363 tccaaggtggagtgacctgttcgacatgtacaatttgacagaagccaagaatgcttcagc 422 ||| ||||||| ||||||||| || || |||||||||||||||||||||| |||||||| Sbjct: 382 tcctaggtggaatgacctgtttgatatttacaatttgacagaagccaagaccgcttcagc 441 Query: 423 agtaattgatctacagcgtctagagatacttgctgggagctacttctgtgttgctggagc 482 |||||||||||| |||||||||||||| |||||||| ||||||||||||| ||||||||| Sbjct: 442 agtaattgatctccagcgtctagagattcttgctggaagctacttctgtgctgctggagc 501 Query: 483 acttgttggtatcataaatcctggaaggatgaccttgttcggtacccttttggttatctg 542 |||||||||| ||||||| ||||| |||||||||||||| |||||||||||||||||||| Sbjct: 502 acttgttggtgtcataaaccctgggaggatgaccttgtttggtacccttttggttatctg 561 Query: 543 gggtctagtgaaagaagcactctttgggaaacccgtgaacagcgatccaacagaatcagt 602 |||||||||||||||||| |||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 562 gggtctagtgaaagaagcgctctttgggaaaccggtgaacagtgatccaacacaatcagt 621 Query: 603 ttatgtctatccgaccattttgattgcactgatttgtgcatttatgtcaataacttacaa 662 | |||| |||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 622 tcatgtttatccgaccattttaattgcactgatttgtgcattcttgtcaataacttacaa 681 Query: 663 tgtaaagaagacagtgagaagtagtcagcctgtttctatctctaagccactgcaaagttc 722 ||||||||||||||| |||| ||||||| ||||||| ||| ||||||| ||||||||||| Sbjct: 682 tgtaaagaagacagtaagaaatagtcagtctgtttcaatcactaagcctctgcaaagttc 741 Query: 723 tgccaagtcaaaactgaagtagacactt 750 ||||||||| |||||||||||||||||| Sbjct: 742 tgccaagtcgaaactgaagtagacactt 769 >dbj|AK068308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146J22, full insert sequence Length = 950 Score = 825 bits (416), Expect = 0.0 Identities = 575/628 (91%) Strand = Plus / Plus Query: 123 ggtgggcggcggcgggtggacgagccgccggatttccatctacgcctcccgcgtcttctt 182 ||||||||| ||| ||||||||||||||||||| || ||||||||||||||| |||||| Sbjct: 144 ggtgggcgggggccggtggacgagccgccggatatcgttctacgcctcccgcgccttctt 203 Query: 183 cctgctcatcatcctccagatcccgctcttcagggtcccttgtagagcaggcacatgcac 242 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 204 cctcctcatcatcctccagatcccgctcttcagggtcccttgtagagcaggcacatgcac 263 Query: 243 aacaccaattcaagttacatcttcgcagttggtctcaaatgagatatttccaccatctgt 302 ||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 264 aacgcccattcaagttacatcttcgcagttggtctcaaatgagatattcccaccatctgt 323 Query: 303 tgtgaaggccatgctctaccctagtgctatagtgagcagcctcactaaaagcatgacatt 362 |||||| ||| | |||| |||| | ||||||| |||| ||| ||||| ||||||||||| Sbjct: 324 tgtgaaagcccttctcttccctggggctatagcaagcaaccttactaagagcatgacatt 383 Query: 363 tccaaggtggagtgacctgttcgacatgtacaatttgacagaagccaagaatgcttcagc 422 ||| ||||||| ||||||||| || || |||||||||||||| ||||||| |||||||| Sbjct: 384 tcctaggtggaatgacctgtttgatatttacaatttgacagatgccaagaccgcttcagc 443 Query: 423 agtaattgatctacagcgtctagagatacttgctgggagctacttctgtgttgctggagc 482 |||||||||||| |||||||||||||| |||||||| ||||||||||||| ||||||||| Sbjct: 444 agtaattgatctccagcgtctagagattcttgctggaagctacttctgtgctgctggagc 503 Query: 483 acttgttggtatcataaatcctggaaggatgaccttgttcggtacccttttggttatctg 542 |||||||||| ||||||| ||||| |||||||||||||| |||||||||||||||||||| Sbjct: 504 acttgttggtgtcataaaccctgggaggatgaccttgtttggtacccttttggttatctg 563 Query: 543 gggtctagtgaaagaagcactctttgggaaacccgtgaacagcgatccaacagaatcagt 602 |||||||||||||||||| |||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 564 gggtctagtgaaagaagcgctctttgggaaaccggtgaacagtgatccaacacaatcagt 623 Query: 603 ttatgtctatccgaccattttgattgcactgatttgtgcatttatgtcaataacttacaa 662 | |||| |||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 624 tcatgtttatccgaccattttaattgcactgatttgtgcattcttgtcaataacttacaa 683 Query: 663 tgtaaagaagacagtgagaagtagtcagcctgtttctatctctaagccactgcaaagttc 722 ||||||||||||||| |||| ||||||| ||||||| ||| ||||||| ||||||||||| Sbjct: 684 tgtaaagaagacagtaagaaatagtcagtctgtttcaatcactaagcctctgcaaagttc 743 Query: 723 tgccaagtcaaaactgaagtagacactt 750 ||||||||| |||||||||||||||||| Sbjct: 744 tgccaagtcgaaactgaagtagacactt 771 >gb|DQ246208.1| Zea mays clone 22109 mRNA sequence Length = 886 Score = 644 bits (325), Expect = 0.0 Identities = 541/613 (88%) Strand = Plus / Plus Query: 134 gcgggtggacgagccgccggatttccatctacgcctcccgcgtcttcttcctgctcatca 193 |||| ||||||||||| ||||| ||||||||||||||||| |||| |||||| ||||||| Sbjct: 103 gcggttggacgagccgtcggatctccatctacgcctcccgagtctacttcctcctcatca 162 Query: 194 tcctccagatcccgctcttcagggtcccttgtagagcaggcacatgcacaacaccaattc 253 | ||||||||||||||||||||||||||||||||||| |||||||||||||| || |||| Sbjct: 163 tgctccagatcccgctcttcagggtcccttgtagagctggcacatgcacaactcctattc 222 Query: 254 aagttacatcttcgcagttggtctcaaatgagatatttccaccatctgttgtgaaggcca 313 |||| ||||| || ||||||||||||||||| ||||| |||||| ||||||||||||||| Sbjct: 223 aagtaacatcatctcagttggtctcaaatgatatattcccaccagctgttgtgaaggcca 282 Query: 314 tgctctaccctagtgctatagtgagcagcctcactaaaagcatgacatttccaaggtgga 373 ||||||||||| | |||| ||||||||||| |||||||||| ||||||||| || |||| Sbjct: 283 tgctctaccctggagctaccgtgagcagcctaactaaaagcaagacatttccgagttgga 342 Query: 374 gtgacctgttcgacatgtacaatttgacagaagccaagaatgcttcagcagtaattgatc 433 ||||||||| ||||||||||| |||||||||| || |||||||| |||||| |||||| Sbjct: 343 atgacctgtttgacatgtacaacctgacagaagcaaaaaatgcttctgcagtagttgatc 402 Query: 434 tacagcgtctagagatacttgctgggagctacttctgtgttgctggagcacttgttggta 493 | |||||||||||||||||||| || |||||||||||||| |||||||| || |||| | Sbjct: 403 tccagcgtctagagatacttgccggaagctacttctgtgtcgctggagcgctcattggca 462 Query: 494 tcataaatcctggaaggatgaccttgttcggtacccttttggttatctggggtctagtga 553 ||||||||||||| |||||||| ||||| |||||||||||| ||||||||||| | |||| Sbjct: 463 tcataaatcctgggaggatgactttgtttggtacccttttgattatctggggtatggtga 522 Query: 554 aagaagcactctttgggaaacccgtgaacagcgatccaacagaatcagtttatgtctatc 613 |||||||||| |||||||| || |||||||| |||| || ||||| | ||||||| | Sbjct: 523 aagaagcactatttgggaagccagtgaacagtgatctgactcaatcaactcatgtctacc 582 Query: 614 cgaccattttgattgcactgatttgtgcatttatgtcaataacttacaatgtaaagaaga 673 | ||||||||||||||||| || |||||||| ||||| ||||||||||| |||||||||| Sbjct: 583 caaccattttgattgcacttatctgtgcattcatgtcgataacttacaacgtaaagaaga 642 Query: 674 cagtgagaagtagtcagcctgtttctatctctaagccactgcaaagttctgccaagtcaa 733 ||| ||||||||| |||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 643 cagcaagaagtagtactcctgtttctatcgctaagccactgataagttctgccaagtcaa 702 Query: 734 aactgaagtagac 746 ||||||||||||| Sbjct: 703 aactgaagtagac 715 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 422 bits (213), Expect = e-114 Identities = 282/305 (92%) Strand = Plus / Minus Query: 446 agatacttgctgggagctacttctgtgttgctggagcacttgttggtatcataaatcctg 505 |||| |||||||| ||||||||||||| ||||||||||||||||||| ||||||| |||| Sbjct: 20938896 agattcttgctggaagctacttctgtgctgctggagcacttgttggtgtcataaaccctg 20938837 Query: 506 gaaggatgaccttgttcggtacccttttggttatctggggtctagtgaaagaagcactct 565 | |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 20938836 ggaggatgaccttgtttggtacccttttggttatctggggtctagtgaaagaagcgctct 20938777 Query: 566 ttgggaaacccgtgaacagcgatccaacagaatcagtttatgtctatccgaccattttga 625 |||||||||| |||||||| ||||||||| |||||||| |||| |||||||||||||| | Sbjct: 20938776 ttgggaaaccggtgaacagtgatccaacacaatcagttcatgtttatccgaccattttaa 20938717 Query: 626 ttgcactgatttgtgcatttatgtcaataacttacaatgtaaagaagacagtgagaagta 685 ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| || Sbjct: 20938716 ttgcactgatttgtgcattcttgtcaataacttacaatgtaaagaagacagtaagaaata 20938657 Query: 686 gtcagcctgtttctatctctaagccactgcaaagttctgccaagtcaaaactgaagtaga 745 ||||| ||||||| ||| ||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 20938656 gtcagtctgtttcaatcactaagcctctgcaaagttctgccaagtcgaaactgaagtaga 20938597 Query: 746 cactt 750 ||||| Sbjct: 20938596 cactt 20938592 Score = 297 bits (150), Expect = 4e-77 Identities = 219/242 (90%) Strand = Plus / Minus Query: 211 ttcagggtcccttgtagagcaggcacatgcacaacaccaattcaagttacatcttcgcag 270 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 20939226 ttcagggtcccttgtagagcaggcacatgcacaacgcccattcaagttacatcttcgcag 20939167 Query: 271 ttggtctcaaatgagatatttccaccatctgttgtgaaggccatgctctaccctagtgct 330 |||||||||||||||||||| ||||||||||||||||| ||| | |||| |||| | ||| Sbjct: 20939166 ttggtctcaaatgagatattcccaccatctgttgtgaaagcccttctcttccctggggct 20939107 Query: 331 atagtgagcagcctcactaaaagcatgacatttccaaggtggagtgacctgttcgacatg 390 |||| |||| ||| ||||| |||||||||||||| ||||||| ||||||||| || || Sbjct: 20939106 atagcaagcaaccttactaagagcatgacatttcctaggtggaatgacctgtttgatatt 20939047 Query: 391 tacaatttgacagaagccaagaatgcttcagcagtaattgatctacagcgtctagagata 450 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||| || Sbjct: 20939046 tacaatttgacagaagccaagaccgcttcagcagtaattgatctccagcgtctagaggta 20938987 Query: 451 ct 452 || Sbjct: 20938986 ct 20938985 Score = 131 bits (66), Expect = 6e-27 Identities = 87/94 (92%) Strand = Plus / Minus Query: 123 ggtgggcggcggcgggtggacgagccgccggatttccatctacgcctcccgcgtcttctt 182 ||||||||| ||| ||||||||||||||||||| || ||||||||||||||| |||||| Sbjct: 20941690 ggtgggcgggggccggtggacgagccgccggatatcgttctacgcctcccgcgccttctt 20941631 Query: 183 cctgctcatcatcctccagatcccgctcttcagg 216 ||| |||||||||||||||||||||||||||||| Sbjct: 20941630 cctcctcatcatcctccagatcccgctcttcagg 20941597 >dbj|AP003902.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1110C07 Length = 173859 Score = 422 bits (213), Expect = e-114 Identities = 282/305 (92%) Strand = Plus / Minus Query: 446 agatacttgctgggagctacttctgtgttgctggagcacttgttggtatcataaatcctg 505 |||| |||||||| ||||||||||||| ||||||||||||||||||| ||||||| |||| Sbjct: 157338 agattcttgctggaagctacttctgtgctgctggagcacttgttggtgtcataaaccctg 157279 Query: 506 gaaggatgaccttgttcggtacccttttggttatctggggtctagtgaaagaagcactct 565 | |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 157278 ggaggatgaccttgtttggtacccttttggttatctggggtctagtgaaagaagcgctct 157219 Query: 566 ttgggaaacccgtgaacagcgatccaacagaatcagtttatgtctatccgaccattttga 625 |||||||||| |||||||| ||||||||| |||||||| |||| |||||||||||||| | Sbjct: 157218 ttgggaaaccggtgaacagtgatccaacacaatcagttcatgtttatccgaccattttaa 157159 Query: 626 ttgcactgatttgtgcatttatgtcaataacttacaatgtaaagaagacagtgagaagta 685 ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| || Sbjct: 157158 ttgcactgatttgtgcattcttgtcaataacttacaatgtaaagaagacagtaagaaata 157099 Query: 686 gtcagcctgtttctatctctaagccactgcaaagttctgccaagtcaaaactgaagtaga 745 ||||| ||||||| ||| ||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 157098 gtcagtctgtttcaatcactaagcctctgcaaagttctgccaagtcgaaactgaagtaga 157039 Query: 746 cactt 750 ||||| Sbjct: 157038 cactt 157034 Score = 297 bits (150), Expect = 4e-77 Identities = 219/242 (90%) Strand = Plus / Minus Query: 211 ttcagggtcccttgtagagcaggcacatgcacaacaccaattcaagttacatcttcgcag 270 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 157668 ttcagggtcccttgtagagcaggcacatgcacaacgcccattcaagttacatcttcgcag 157609 Query: 271 ttggtctcaaatgagatatttccaccatctgttgtgaaggccatgctctaccctagtgct 330 |||||||||||||||||||| ||||||||||||||||| ||| | |||| |||| | ||| Sbjct: 157608 ttggtctcaaatgagatattcccaccatctgttgtgaaagcccttctcttccctggggct 157549 Query: 331 atagtgagcagcctcactaaaagcatgacatttccaaggtggagtgacctgttcgacatg 390 |||| |||| ||| ||||| |||||||||||||| ||||||| ||||||||| || || Sbjct: 157548 atagcaagcaaccttactaagagcatgacatttcctaggtggaatgacctgtttgatatt 157489 Query: 391 tacaatttgacagaagccaagaatgcttcagcagtaattgatctacagcgtctagagata 450 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||| || Sbjct: 157488 tacaatttgacagaagccaagaccgcttcagcagtaattgatctccagcgtctagaggta 157429 Query: 451 ct 452 || Sbjct: 157428 ct 157427 Score = 131 bits (66), Expect = 6e-27 Identities = 87/94 (92%) Strand = Plus / Minus Query: 123 ggtgggcggcggcgggtggacgagccgccggatttccatctacgcctcccgcgtcttctt 182 ||||||||| ||| ||||||||||||||||||| || ||||||||||||||| |||||| Sbjct: 160132 ggtgggcgggggccggtggacgagccgccggatatcgttctacgcctcccgcgccttctt 160073 Query: 183 cctgctcatcatcctccagatcccgctcttcagg 216 ||| |||||||||||||||||||||||||||||| Sbjct: 160072 cctcctcatcatcctccagatcccgctcttcagg 160039