BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst033g04 (1390 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK061392.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 3e-60 gb|AY105147.1| Zea mays PCO127138 mRNA sequence 172 2e-39 emb|CT837755.1| Oryza sativa (indica cultivar-group) cDNA clone:... 123 2e-24 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 117 1e-22 dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic D... 117 1e-22 >dbj|AK061392.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-D03, full insert sequence Length = 1209 Score = 242 bits (122), Expect = 3e-60 Identities = 290/346 (83%) Strand = Plus / Plus Query: 460 caaacccaataacacctactgtcagcacaccacctcctgctccaatcaccactccagtca 519 |||||||||| || ||| || |||||| ||||||||||||| | ||| |||||| || Sbjct: 428 caaacccaatgacgcctgctatcagcatgccacctcctgctctcaccacaactccaccca 487 Query: 520 cagctccagttgtgtcagggcagcaagcctggtgtgtggccaagtctggctcaacagtaa 579 | || |||| | | || ||||||||| ||||||||||||||| ||| |||| ||| | Sbjct: 488 ctgccccaggtctttctgggcagcaactatggtgtgtggccaaggctgactcagcagata 547 Query: 580 ttgcactccagaacgcactggactacgcgtgcggcattgcaggagcagattgctcaccga 639 ||||||| ||||| |||||||||||||| |||||||||| |||||||||||||| | | | Sbjct: 548 ttgcacttcagaatgcactggactacgcatgcggcattggaggagcagattgcttagcaa 607 Query: 640 tacagccatcggggagctgttactatccaaataccctggaagcccatgcatcatatgctt 699 |||| ||||| || | ||||| |||||||||||| | | || |||||||| ||||||| Sbjct: 608 tacaaccatcaggcacttgttattatccaaataccttaggtgcgcatgcatcctatgctt 667 Query: 700 tcaacagctattaccagaggaaccctgcaccctccagctgcgactttggggggacggcaa 759 | ||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||| Sbjct: 668 ttaacagctattaccagaggagccctgcaacctccagctgcgattttggggggacggcaa 727 Query: 760 tgcttgtcaaggctaatccgagctcaggaagttgtgtcttggcatc 805 | |||||||| | ||||| ||||||||||| ||||| |||||||| Sbjct: 728 ttcttgtcaatgtcaatcccagctcaggaagctgtgttttggcatc 773 Score = 170 bits (86), Expect = 1e-38 Identities = 164/190 (86%) Strand = Plus / Plus Query: 124 ttccctgcagctcaggcaaaccaactgtccacgatgactcaaatccagctcaggtgagca 183 |||||||| |||||||||||| ||||| |||||||||| ||||||| |||| | | Sbjct: 146 ttccctgctgctcaggcaaacaaactgcccacgatgacctgaatccagaacaggcaacta 205 Query: 184 atccgacgatgccgatcacagtcccatctacgaatccagcaccaacaatcatcactgtgc 243 |||| |||||||| ||||||||||||||||| || |||||||||| ||||||||||| | Sbjct: 206 atccaacgatgccaatcacagtcccatctacaaacccagcaccaattatcatcactgttc 265 Query: 244 cttccacaaaccctaccatcacaatcccttccttgaaccctcttcccacacccatcacag 303 ||||||||||||||||||||||||| ||||||||||| ||||| || |||||||| || | Sbjct: 266 cttccacaaaccctaccatcacaattccttccttgaatcctctccctacacccattactg 325 Query: 304 ccccatcaat 313 |||| ||||| Sbjct: 326 ccccctcaat 335 >gb|AY105147.1| Zea mays PCO127138 mRNA sequence Length = 827 Score = 172 bits (87), Expect = 2e-39 Identities = 186/219 (84%) Strand = Plus / Plus Query: 588 cagaacgcactggactacgcgtgcggcattgcaggagcagattgctcaccgatacagcca 647 |||||||| ||||||||||||||||||||| ||||| |||||| || |||| ||||| Sbjct: 165 cagaacgcgttggactacgcgtgcggcattggaggagtagattgttcggcgattcagccg 224 Query: 648 tcggggagctgttactatccaaataccctggaagcccatgcatcatatgctttcaacagc 707 || |||||||| |||||||| |||||| | ||||||||||||| || || ||||||| Sbjct: 225 tcagggagctgctactatccgaataccatccaagcccatgcatcctacgcgttcaacact 284 Query: 708 tattaccagaggaaccctgcaccctccagctgcgactttggggggacggcaatgcttgtc 767 ||||||||||| ||||||| | |||||||||||||||||||||||||||||||| ||| Sbjct: 285 tattaccagagaaaccctgtttcttccagctgcgactttggggggacggcaatgctcgtc 344 Query: 768 aaggctaatccgagctcaggaagttgtgtcttggcatca 806 | |||||||| ||||| || || |||||||| |||||| Sbjct: 345 actgctaatccaagctctgggagctgtgtctttgcatca 383 >emb|CT837755.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA248M21, full insert sequence Length = 2247 Score = 123 bits (62), Expect = 2e-24 Identities = 71/74 (95%) Strand = Plus / Minus Query: 696 gctttcaacagctattaccagaggaaccctgcaccctccagctgcgactttggggggacg 755 ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 1807 gctttcaacagctattaccagaggagccctgcaccctccagctgcgattttggggggacg 1748 Query: 756 gcaatgcttgtcaa 769 ||||||||||||| Sbjct: 1747 acaatgcttgtcaa 1734 Score = 117 bits (59), Expect = 1e-22 Identities = 83/91 (91%) Strand = Plus / Plus Query: 183 aatccgacgatgccgatcacagtcccatctacgaatccagcaccaacaatcatcactgtg 242 ||||| |||||||| ||||||||||||||||| || |||||||||| |||||||||||| Sbjct: 1482 aatccaacgatgccaatcacagtcccatctacaaacccagcaccaataatcatcactgtt 1541 Query: 243 ccttccacaaaccctaccatcacaatccctt 273 ||||||| |||||||||||||||||| |||| Sbjct: 1542 ccttccaaaaaccctaccatcacaattcctt 1572 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 117 bits (59), Expect = 1e-22 Identities = 83/91 (91%) Strand = Plus / Minus Query: 183 aatccgacgatgccgatcacagtcccatctacgaatccagcaccaacaatcatcactgtg 242 ||||| |||||||| ||||||||||||||||| || |||||||||| |||||||||||| Sbjct: 19410699 aatccaacgatgccaatcacagtcccatctacaaacccagcaccaataatcatcactgtt 19410640 Query: 243 ccttccacaaaccctaccatcacaatccctt 273 ||||||| |||||||||||||||||| |||| Sbjct: 19410639 ccttccaaaaaccctaccatcacaattcctt 19410609 Score = 115 bits (58), Expect = 5e-22 Identities = 70/74 (94%) Strand = Plus / Plus Query: 696 gctttcaacagctattaccagaggaaccctgcaccctccagctgcgactttggggggacg 755 ||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||| Sbjct: 19410373 gctttcaacagctattaccagaggagccctgcaccctccagctgcgatttttgggggacg 19410432 Query: 756 gcaatgcttgtcaa 769 ||||||||||||| Sbjct: 19410433 acaatgcttgtcaa 19410446 Score = 101 bits (51), Expect = 7e-18 Identities = 174/215 (80%) Strand = Plus / Plus Query: 460 caaacccaataacacctactgtcagcacaccacctcctgctccaatcaccactccagtca 519 |||||||||| || ||| || |||||| ||||||||||||| | ||| |||||| || Sbjct: 19409043 caaacccaatgacgcctgctatcagcatgccacctcctgctctcaccacaactccaccca 19409102 Query: 520 cagctccagttgtgtcagggcagcaagcctggtgtgtggccaagtctggctcaacagtaa 579 | || |||| | | || ||||||||| ||||||||||||||| ||| |||| ||| | Sbjct: 19409103 ctgccccaggtctttccgggcagcaactatggtgtgtggccaaggctgactcagcagata 19409162 Query: 580 ttgcactccagaacgcactggactacgcgtgcggcattgcaggagcagattgctcaccga 639 |||||| |||| ||||||||||| ||||||||||||| |||||||||||||| | | | Sbjct: 19409163 ctgcacttaagaatgcactggactaagcgtgcggcattggaggagcagattgcttagcaa 19409222 Query: 640 tacagccatcggggagctgttactatccaaatacc 674 |||| ||||| || | ||||| |||||||||||| Sbjct: 19409223 tacaaccatcaggcacttgttattatccaaatacc 19409257 >dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 117 bits (59), Expect = 1e-22 Identities = 83/91 (91%) Strand = Plus / Minus Query: 183 aatccgacgatgccgatcacagtcccatctacgaatccagcaccaacaatcatcactgtg 242 ||||| |||||||| ||||||||||||||||| || |||||||||| |||||||||||| Sbjct: 28226 aatccaacgatgccaatcacagtcccatctacaaacccagcaccaataatcatcactgtt 28167 Query: 243 ccttccacaaaccctaccatcacaatccctt 273 ||||||| |||||||||||||||||| |||| Sbjct: 28166 ccttccaaaaaccctaccatcacaattcctt 28136 Score = 115 bits (58), Expect = 5e-22 Identities = 70/74 (94%) Strand = Plus / Plus Query: 696 gctttcaacagctattaccagaggaaccctgcaccctccagctgcgactttggggggacg 755 ||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||| Sbjct: 27900 gctttcaacagctattaccagaggagccctgcaccctccagctgcgatttttgggggacg 27959 Query: 756 gcaatgcttgtcaa 769 ||||||||||||| Sbjct: 27960 acaatgcttgtcaa 27973 Score = 101 bits (51), Expect = 7e-18 Identities = 174/215 (80%) Strand = Plus / Plus Query: 460 caaacccaataacacctactgtcagcacaccacctcctgctccaatcaccactccagtca 519 |||||||||| || ||| || |||||| ||||||||||||| | ||| |||||| || Sbjct: 26570 caaacccaatgacgcctgctatcagcatgccacctcctgctctcaccacaactccaccca 26629 Query: 520 cagctccagttgtgtcagggcagcaagcctggtgtgtggccaagtctggctcaacagtaa 579 | || |||| | | || ||||||||| ||||||||||||||| ||| |||| ||| | Sbjct: 26630 ctgccccaggtctttccgggcagcaactatggtgtgtggccaaggctgactcagcagata 26689 Query: 580 ttgcactccagaacgcactggactacgcgtgcggcattgcaggagcagattgctcaccga 639 |||||| |||| ||||||||||| ||||||||||||| |||||||||||||| | | | Sbjct: 26690 ctgcacttaagaatgcactggactaagcgtgcggcattggaggagcagattgcttagcaa 26749 Query: 640 tacagccatcggggagctgttactatccaaatacc 674 |||| ||||| || | ||||| |||||||||||| Sbjct: 26750 tacaaccatcaggcacttgttattatccaaatacc 26784