BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst033f14
         (689 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NM_001059854.1| Oryza sativa (japonica cultivar-group) Os04g...   161   5e-36
dbj|AK069879.1| Oryza sativa (japonica cultivar-group) cDNA clon...   161   5e-36
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...   151   4e-33
emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4,...   151   4e-33
gb|BT016668.1| Zea mays clone Contig501 mRNA sequence                 119   2e-23

>ref|NM_001059854.1| Oryza sativa (japonica cultivar-group) Os04g0517300 (Os04g0517300)
           mRNA, complete cds
          Length = 1662

 Score =  161 bits (81), Expect = 5e-36
 Identities = 117/129 (90%)
 Strand = Plus / Plus

                                                                       
Query: 183 aatgaacatactcgagaggatacgcgggggcggcgacagggcggccgggacggagatgcc 242
           ||||||||||||||||||||||||||| ||||||||||||||||||| |  ||||  |||
Sbjct: 162 aatgaacatactcgagaggatacgcggaggcggcgacagggcggccgtgggggaggggcc 221

                                                                       
Query: 243 ccggcagccggagccctgggtggagatttcggagtccgtctcgcggctctgctgcttcga 302
            ||| |||||||||| ||||||||||||||||||||| |||| ||||||||| |||||||
Sbjct: 222 gcgggagccggagccatgggtggagatttcggagtccatctctcggctctgcagcttcga 281

                    
Query: 303 cgccggcag 311
           |||||||||
Sbjct: 282 cgccggcag 290


>dbj|AK069879.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036K12, full
           insert sequence
          Length = 1665

 Score =  161 bits (81), Expect = 5e-36
 Identities = 117/129 (90%)
 Strand = Plus / Plus

                                                                       
Query: 183 aatgaacatactcgagaggatacgcgggggcggcgacagggcggccgggacggagatgcc 242
           ||||||||||||||||||||||||||| ||||||||||||||||||| |  ||||  |||
Sbjct: 165 aatgaacatactcgagaggatacgcggaggcggcgacagggcggccgtgggggaggggcc 224

                                                                       
Query: 243 ccggcagccggagccctgggtggagatttcggagtccgtctcgcggctctgctgcttcga 302
            ||| |||||||||| ||||||||||||||||||||| |||| ||||||||| |||||||
Sbjct: 225 gcgggagccggagccatgggtggagatttcggagtccatctctcggctctgcagcttcga 284

                    
Query: 303 cgccggcag 311
           |||||||||
Sbjct: 285 cgccggcag 293


>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score =  151 bits (76), Expect = 4e-33
 Identities = 126/142 (88%), Gaps = 3/142 (2%)
 Strand = Plus / Minus

                                                                            
Query: 196      gagaggatacgcgggggcggcgacagggcggccgggacggagatgccccggcagccggag 255
                |||||||||||||| ||||||||||||||||||| |  ||||  ||| ||| ||||||||
Sbjct: 25833221 gagaggatacgcggaggcggcgacagggcggccgtgggggaggggccgcgggagccggag 25833162

                                                                            
Query: 256      ccctgggtggagatttcggagtccgtctcgcggctctgctgcttcgacgccggcagcggc 315
                || ||||||||||||||||||||| |||| ||||||||| |||||||||||||||| |  
Sbjct: 25833161 ccatgggtggagatttcggagtccatctctcggctctgcagcttcgacgccggcagag-- 25833104

                                      
Query: 316      atctctgtaatccttctccttt 337
                 |||||||||||||||||||||
Sbjct: 25833103 -tctctgtaatccttctccttt 25833083


>emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073E02,
             complete sequence
          Length = 139080

 Score =  151 bits (76), Expect = 4e-33
 Identities = 126/142 (88%), Gaps = 3/142 (2%)
 Strand = Plus / Minus

                                                                         
Query: 196   gagaggatacgcgggggcggcgacagggcggccgggacggagatgccccggcagccggag 255
             |||||||||||||| ||||||||||||||||||| |  ||||  ||| ||| ||||||||
Sbjct: 50631 gagaggatacgcggaggcggcgacagggcggccgtgggggaggggccgcgggagccggag 50572

                                                                         
Query: 256   ccctgggtggagatttcggagtccgtctcgcggctctgctgcttcgacgccggcagcggc 315
             || ||||||||||||||||||||| |||| ||||||||| |||||||||||||||| |  
Sbjct: 50571 ccatgggtggagatttcggagtccatctctcggctctgcagcttcgacgccggcagag-- 50514

                                   
Query: 316   atctctgtaatccttctccttt 337
              |||||||||||||||||||||
Sbjct: 50513 -tctctgtaatccttctccttt 50493


>gb|BT016668.1| Zea mays clone Contig501 mRNA sequence
          Length = 1742

 Score =  119 bits (60), Expect = 2e-23
 Identities = 108/124 (87%)
 Strand = Plus / Plus

                                                                       
Query: 184 atgaacatactcgagaggatacgcgggggcggcgacagggcggccgggacggagatgccc 243
           |||||||||||||| |||||||| || || |||||||||||||| |  ||||||   |||
Sbjct: 155 atgaacatactcgaaaggatacgtggaggtggcgacagggcggctgccacggagcgcccc 214

                                                                       
Query: 244 cggcagccggagccctgggtggagatttcggagtccgtctcgcggctctgctgcttcgac 303
           | || |||||||  ||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 215 ccgcggccggagtgctgggtggagatttcggagtccgtctcacggctctgcagcttcgac 274

               
Query: 304 gccg 307
           ||||
Sbjct: 275 gccg 278