BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst033d09 (654 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT835712.1| Oryza sativa (indica cultivar-group) cDNA clone:... 305 1e-79 dbj|AK241904.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 305 1e-79 gb|AY111661.1| Zea mays CL40196_1 mRNA sequence 212 1e-51 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 190 5e-45 gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 gen... 190 5e-45 >emb|CT835712.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA022C13, full insert sequence Length = 646 Score = 305 bits (154), Expect = 1e-79 Identities = 217/238 (91%) Strand = Plus / Plus Query: 108 gacgtcgccgactccatcgacgcgctataccgcaaggacgaggccatggccgagctcaag 167 |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 122 gacgtcgccgactccatcgacgcgctctaccgcaaggatgaggccatggcagagctcaag 181 Query: 168 tcggaggtgatggaggcgctgcacaaggaggtcaggtcgctcgacgacgacagctggatg 227 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 182 tcggaggtgatggaggcgctgcaaaaggaggtcaggtcgctcgatgacgacagctggatg 241 Query: 228 ttcgccgcgccccgctcccgcatcaacctcgtctccaggccaggtggttacctacccaag 287 ||||||||||||||||||||||||||||||||||| | | | ||||||||||||| |||| Sbjct: 242 ttcgccgcgccccgctcccgcatcaacctcgtctctatgtctggtggttacctacgcaag 301 Query: 288 caacagggcaaattcgcggagctagctcaagcgtccaagaagacaaggaacttctagg 345 || |||| ||||| || || || | |||||| ||||||||||| ||||| ||||||| Sbjct: 302 cagcaggaaaaattggctgacctcggtcaagcatccaagaagacgaggaatttctagg 359 >dbj|AK241904.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075038C21, full insert sequence Length = 634 Score = 305 bits (154), Expect = 1e-79 Identities = 217/238 (91%) Strand = Plus / Plus Query: 108 gacgtcgccgactccatcgacgcgctataccgcaaggacgaggccatggccgagctcaag 167 |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 105 gacgtcgccgactccatcgacgcgctctaccgcaaggatgaggccatggcagagctcaag 164 Query: 168 tcggaggtgatggaggcgctgcacaaggaggtcaggtcgctcgacgacgacagctggatg 227 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 165 tcggaggtgatggaggcgctgcaaaaggaggtcaggtcgctcgatgacgacagctggatg 224 Query: 228 ttcgccgcgccccgctcccgcatcaacctcgtctccaggccaggtggttacctacccaag 287 ||||||||||||||||||||||||||||||||||| | | | ||||||||||||| |||| Sbjct: 225 ttcgccgcgccccgctcccgcatcaacctcgtctctatgtctggtggttacctacgcaag 284 Query: 288 caacagggcaaattcgcggagctagctcaagcgtccaagaagacaaggaacttctagg 345 || |||| ||||| || || || | |||||| ||||||||||| ||||| ||||||| Sbjct: 285 cagcaggaaaaattggctgacctcggtcaagcatccaagaagacgaggaatttctagg 342 >gb|AY111661.1| Zea mays CL40196_1 mRNA sequence Length = 563 Score = 212 bits (107), Expect = 1e-51 Identities = 185/211 (87%) Strand = Plus / Minus Query: 136 accgcaaggacgaggccatggccgagctcaagtcggaggtgatggaggcgctgcacaagg 195 |||||||||||||||||||||| || |||||||| |||||||||||||||||||| | || Sbjct: 440 accgcaaggacgaggccatggctgaactcaagtctgaggtgatggaggcgctgcagaggg 381 Query: 196 aggtcaggtcgctcgacgacgacagctggatgttcgccgcgccccgctcccgcatcaacc 255 |||| ||||| |||||||| |||| ||||||||||||||| || || ||||||||||||| Sbjct: 380 aggtgaggtctctcgacgaagacaactggatgttcgccgcaccgcggtcccgcatcaacc 321 Query: 256 tcgtctccaggccaggtggttacctacccaagcaacagggcaaattcgcggagctagctc 315 ||||||||||||| |||| |||||| ||||||||||| || ||| || | ||| | | | Sbjct: 320 tcgtctccaggcctggtgcttacctgcccaagcaacacgggaaactctcagagttggggc 261 Query: 316 aagcgtccaagaagacaaggaacttctaggg 346 |||| |||||||| ||||||||||||||||| Sbjct: 260 aagcatccaagaaaacaaggaacttctaggg 230 >dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 190 bits (96), Expect = 5e-45 Identities = 102/104 (98%) Strand = Plus / Minus Query: 159 gagctcaagtcggaggtgatggaggcgctgcacaaggaggtcaggtcgctcgacgacgac 218 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 22418600 gagctcaagtcggaggtgatggaggcgctgcaaaaggaggtcaggtcgctcgatgacgac 22418541 Query: 219 agctggatgttcgccgcgccccgctcccgcatcaacctcgtctc 262 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22418540 agctggatgttcgccgcgccccgctcccgcatcaacctcgtctc 22418497 Score = 83.8 bits (42), Expect = 8e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 108 gacgtcgccgactccatcgacgcgctataccgcaaggacgaggccatggc 157 |||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 22418738 gacgtcgccgactccatcgacgcgctctaccgcaaggatgaggccatggc 22418689 >gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 genomic sequence, complete sequence Length = 143961 Score = 190 bits (96), Expect = 5e-45 Identities = 102/104 (98%) Strand = Plus / Minus Query: 159 gagctcaagtcggaggtgatggaggcgctgcacaaggaggtcaggtcgctcgacgacgac 218 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 70623 gagctcaagtcggaggtgatggaggcgctgcaaaaggaggtcaggtcgctcgatgacgac 70564 Query: 219 agctggatgttcgccgcgccccgctcccgcatcaacctcgtctc 262 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70563 agctggatgttcgccgcgccccgctcccgcatcaacctcgtctc 70520 Score = 83.8 bits (42), Expect = 8e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 108 gacgtcgccgactccatcgacgcgctataccgcaaggacgaggccatggc 157 |||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 70761 gacgtcgccgactccatcgacgcgctctaccgcaaggatgaggccatggc 70712