BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst032g17 (1005 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001073098.1| Oryza sativa (japonica cultivar-group) Os12g... 458 e-125 dbj|AK102429.1| Oryza sativa (japonica cultivar-group) cDNA clon... 458 e-125 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 367 6e-98 emb|AL935069.5|CNS08CCL Oryza sativa chromosome 12, . BAC OSJNBb... 367 6e-98 >ref|NM_001073098.1| Oryza sativa (japonica cultivar-group) Os12g0277400 (Os12g0277400) mRNA, partial cds Length = 3397 Score = 458 bits (231), Expect = e-125 Identities = 560/667 (83%), Gaps = 17/667 (2%) Strand = Plus / Plus Query: 345 aagtgatggcagaagttcaggatggccattatgattcgtccgctgacagcttgtgtgttg 404 ||||||||||||||| ||||||||| ||| ||| || ||| ||||||||||| |||||| Sbjct: 581 aagtgatggcagaaggtcaggatggttattttgactcatccactgacagcttgcgtgttg 640 Query: 405 agcctatatatgaatcattcctgtgtccactcacaaaacaagttatgcgggatcctgtca 464 ||||||| |||||||||||| ||||||| ||| | ||||||||||||||||||||||||| Sbjct: 641 agcctatttatgaatcattcttgtgtcctctctctaaacaagttatgcgggatcctgtca 700 Query: 465 ctatagagagcggtgctacattcaaacgagaagccattttgaagtggttcaaggaatgta 524 |||||||||| ||||| ||||| |||| ||||| ||| |||||||||||||||| | Sbjct: 701 ctatagagagtggtgccacatttgaacgtgaagctattctgaagtggttcaaggacaatg 760 Query: 525 ttagcagtggaaggagacttgtctgccctgttactaagaaggagctcagcagcactgagt 584 |||| |||| |||||||||||||||||||||||||| ||||| |||||||| ||||||| Sbjct: 761 gtagcggtgggaggagacttgtctgccctgttactaataaggaactcagcagtactgagt 820 Query: 585 tgaatccaagtattgcactgagaaacacaattgatgaatggatgcatcgaaatgaggcag 644 | |||||||||||||| ||| | || || |||||||||||||||||| |||||||||||| Sbjct: 821 taaatccaagtattgctctgcggaataccattgatgaatggatgcatagaaatgaggcag 880 Query: 645 ccaaacttgacgcagcctgtaaatc-----cttgtgagagttcagaaattgatattttac 699 | |||||||||| ||| |||| || | | ||| |||||||| ||||||||| | Sbjct: 881 cgaaacttgacgttgcccgtaagtcattaacctctgattgttcagaaggtgatattttgc 940 Query: 700 aagcacttgaatatgcagtgaagatatgtcagagaagtagatccaacagccatgtagtga 759 |||| ||||| |||| | | ||||||| |||||||||||||||| || ||| |||||| Sbjct: 941 aagctcttgagtatgttgcggagatatgccagagaagtagatccagtagacatttagtga 1000 Query: 760 ggaagcttggattgataagcttgattgctgac---ttgaagaatagcagtacaaaagtgc 816 |||| |||| ||||| ||||||||| ||||| ||||||||||||||| ||||||| | Sbjct: 1001 ggaaagttgggttgattagcttgattactgacttgttgaagaatagcagtccaaaagtac 1060 Query: 817 ggcaaaaagcattggaatcatggaatgtcttcactttgtagcaaaagatgacaatgaaaa 876 | ||||| |||||| |||| | |||| ||||||||||||| |||||||||| || Sbjct: 1061 gtcaaaaggcattg-------ggaa-gccttcgctttgtagcaaaaaatgacaatgacaa 1112 Query: 877 caagaatgagattgctttgggggacaacattcacacaactgtgaagttcttatctcatgg 936 ||||||||| |||||| |||||||| |||| ||| | ||||||||||||| |||||| Sbjct: 1113 caagaatgaaattgctgctggggacaatattcgcactattgtgaagttcttaaatcatgg 1172 Query: 937 gcacatccaggcgaaagaacaggctgtgtgtttgttatatgaactttcaggaatataaac 996 |||| |||| ||||||||||||||| | ||||||||||||||||||| |||||||||| Sbjct: 1173 gcactcacaggagaaagaacaggctgtatctttgttatatgaactttca-gaatataaac 1231 Query: 997 ccctttc 1003 | ||||| Sbjct: 1232 ctctttc 1238 >dbj|AK102429.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093H07, full insert sequence Length = 3398 Score = 458 bits (231), Expect = e-125 Identities = 560/667 (83%), Gaps = 17/667 (2%) Strand = Plus / Plus Query: 345 aagtgatggcagaagttcaggatggccattatgattcgtccgctgacagcttgtgtgttg 404 ||||||||||||||| ||||||||| ||| ||| || ||| ||||||||||| |||||| Sbjct: 582 aagtgatggcagaaggtcaggatggttattttgactcatccactgacagcttgcgtgttg 641 Query: 405 agcctatatatgaatcattcctgtgtccactcacaaaacaagttatgcgggatcctgtca 464 ||||||| |||||||||||| ||||||| ||| | ||||||||||||||||||||||||| Sbjct: 642 agcctatttatgaatcattcttgtgtcctctctctaaacaagttatgcgggatcctgtca 701 Query: 465 ctatagagagcggtgctacattcaaacgagaagccattttgaagtggttcaaggaatgta 524 |||||||||| ||||| ||||| |||| ||||| ||| |||||||||||||||| | Sbjct: 702 ctatagagagtggtgccacatttgaacgtgaagctattctgaagtggttcaaggacaatg 761 Query: 525 ttagcagtggaaggagacttgtctgccctgttactaagaaggagctcagcagcactgagt 584 |||| |||| |||||||||||||||||||||||||| ||||| |||||||| ||||||| Sbjct: 762 gtagcggtgggaggagacttgtctgccctgttactaataaggaactcagcagtactgagt 821 Query: 585 tgaatccaagtattgcactgagaaacacaattgatgaatggatgcatcgaaatgaggcag 644 | |||||||||||||| ||| | || || |||||||||||||||||| |||||||||||| Sbjct: 822 taaatccaagtattgctctgcggaataccattgatgaatggatgcatagaaatgaggcag 881 Query: 645 ccaaacttgacgcagcctgtaaatc-----cttgtgagagttcagaaattgatattttac 699 | |||||||||| ||| |||| || | | ||| |||||||| ||||||||| | Sbjct: 882 cgaaacttgacgttgcccgtaagtcattaacctctgattgttcagaaggtgatattttgc 941 Query: 700 aagcacttgaatatgcagtgaagatatgtcagagaagtagatccaacagccatgtagtga 759 |||| ||||| |||| | | ||||||| |||||||||||||||| || ||| |||||| Sbjct: 942 aagctcttgagtatgttgcggagatatgccagagaagtagatccagtagacatttagtga 1001 Query: 760 ggaagcttggattgataagcttgattgctgac---ttgaagaatagcagtacaaaagtgc 816 |||| |||| ||||| ||||||||| ||||| ||||||||||||||| ||||||| | Sbjct: 1002 ggaaagttgggttgattagcttgattactgacttgttgaagaatagcagtccaaaagtac 1061 Query: 817 ggcaaaaagcattggaatcatggaatgtcttcactttgtagcaaaagatgacaatgaaaa 876 | ||||| |||||| |||| | |||| ||||||||||||| |||||||||| || Sbjct: 1062 gtcaaaaggcattg-------ggaa-gccttcgctttgtagcaaaaaatgacaatgacaa 1113 Query: 877 caagaatgagattgctttgggggacaacattcacacaactgtgaagttcttatctcatgg 936 ||||||||| |||||| |||||||| |||| ||| | ||||||||||||| |||||| Sbjct: 1114 caagaatgaaattgctgctggggacaatattcgcactattgtgaagttcttaaatcatgg 1173 Query: 937 gcacatccaggcgaaagaacaggctgtgtgtttgttatatgaactttcaggaatataaac 996 |||| |||| ||||||||||||||| | ||||||||||||||||||| |||||||||| Sbjct: 1174 gcactcacaggagaaagaacaggctgtatctttgttatatgaactttca-gaatataaac 1232 Query: 997 ccctttc 1003 | ||||| Sbjct: 1233 ctctttc 1239 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 367 bits (185), Expect = 6e-98 Identities = 418/495 (84%), Gaps = 8/495 (1%) Strand = Plus / Minus Query: 345 aagtgatggcagaagttcaggatggccattatgattcgtccgctgacagcttgtgtgttg 404 ||||||||||||||| ||||||||| ||| ||| || ||| ||||||||||| |||||| Sbjct: 10284284 aagtgatggcagaaggtcaggatggttattttgactcatccactgacagcttgcgtgttg 10284225 Query: 405 agcctatatatgaatcattcctgtgtccactcacaaaacaagttatgcgggatcctgtca 464 ||||||| |||||||||||| ||||||| ||| | ||||||||||||||||||||||||| Sbjct: 10284224 agcctatttatgaatcattcttgtgtcctctctctaaacaagttatgcgggatcctgtca 10284165 Query: 465 ctatagagagcggtgctacattcaaacgagaagccattttgaagtggttcaaggaatgta 524 |||||||||| ||||| ||||| |||| ||||| ||| |||||||||||||||| | Sbjct: 10284164 ctatagagagtggtgccacatttgaacgtgaagctattctgaagtggttcaaggacaatg 10284105 Query: 525 ttagcagtggaaggagacttgtctgccctgttactaagaaggagctcagcagcactgagt 584 |||| |||| |||||||||||||||||||||||||| ||||| |||||||| ||||||| Sbjct: 10284104 gtagcggtgggaggagacttgtctgccctgttactaataaggaactcagcagtactgagt 10284045 Query: 585 tgaatccaagtattgcactgagaaacacaattgatgaatggatgcatcgaaatgaggcag 644 | |||||||||||||| ||| | || || |||||||||||||||||| |||||||||||| Sbjct: 10284044 taaatccaagtattgctctgcggaataccattgatgaatggatgcatagaaatgaggcag 10283985 Query: 645 ccaaacttgacgcagcctgtaaatc-----cttgtgagagttcagaaattgatattttac 699 | |||||||||| ||| |||| || | | ||| |||||||| ||||||||| | Sbjct: 10283984 cgaaacttgacgttgcccgtaagtcattaacctctgattgttcagaaggtgatattttgc 10283925 Query: 700 aagcacttgaatatgcagtgaagatatgtcagagaagtagatccaacagccatgtagtga 759 |||| ||||| |||| | | ||||||| |||||||||||||||| || ||| |||||| Sbjct: 10283924 aagctcttgagtatgttgcggagatatgccagagaagtagatccagtagacatttagtga 10283865 Query: 760 ggaagcttggattgataagcttgattgctgac---ttgaagaatagcagtacaaaagtgc 816 |||| |||| ||||| ||||||||| ||||| ||||||||||||||| ||||||| | Sbjct: 10283864 ggaaagttgggttgattagcttgattactgacttgttgaagaatagcagtccaaaagtac 10283805 Query: 817 ggcaaaaagcattgg 831 | ||||| ||||||| Sbjct: 10283804 gtcaaaaggcattgg 10283790 Score = 97.6 bits (49), Expect = 8e-17 Identities = 107/125 (85%), Gaps = 1/125 (0%) Strand = Plus / Minus Query: 879 agaatgagattgctttgggggacaacattcacacaactgtgaagttcttatctcatgggc 938 ||||||| |||||| |||||||| |||| ||| | ||||||||||||| |||||||| Sbjct: 10283670 agaatgaaattgctgctggggacaatattcgcactattgtgaagttcttaaatcatgggc 10283611 Query: 939 acatccaggcgaaagaacaggctgtgtgtttgttatatgaactttcaggaatataaaccc 998 || |||| ||||||||||||||| | ||||||||||||||||||| ||||||||||| Sbjct: 10283610 actcacaggagaaagaacaggctgtatctttgttatatgaactttca-gaatataaacct 10283552 Query: 999 ctttc 1003 ||||| Sbjct: 10283551 ctttc 10283547 >emb|AL935069.5|CNS08CCL Oryza sativa chromosome 12, . BAC OSJNBb0115B15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135439 Score = 367 bits (185), Expect = 6e-98 Identities = 418/495 (84%), Gaps = 8/495 (1%) Strand = Plus / Minus Query: 345 aagtgatggcagaagttcaggatggccattatgattcgtccgctgacagcttgtgtgttg 404 ||||||||||||||| ||||||||| ||| ||| || ||| ||||||||||| |||||| Sbjct: 47203 aagtgatggcagaaggtcaggatggttattttgactcatccactgacagcttgcgtgttg 47144 Query: 405 agcctatatatgaatcattcctgtgtccactcacaaaacaagttatgcgggatcctgtca 464 ||||||| |||||||||||| ||||||| ||| | ||||||||||||||||||||||||| Sbjct: 47143 agcctatttatgaatcattcttgtgtcctctctctaaacaagttatgcgggatcctgtca 47084 Query: 465 ctatagagagcggtgctacattcaaacgagaagccattttgaagtggttcaaggaatgta 524 |||||||||| ||||| ||||| |||| ||||| ||| |||||||||||||||| | Sbjct: 47083 ctatagagagtggtgccacatttgaacgtgaagctattctgaagtggttcaaggacaatg 47024 Query: 525 ttagcagtggaaggagacttgtctgccctgttactaagaaggagctcagcagcactgagt 584 |||| |||| |||||||||||||||||||||||||| ||||| |||||||| ||||||| Sbjct: 47023 gtagcggtgggaggagacttgtctgccctgttactaataaggaactcagcagtactgagt 46964 Query: 585 tgaatccaagtattgcactgagaaacacaattgatgaatggatgcatcgaaatgaggcag 644 | |||||||||||||| ||| | || || |||||||||||||||||| |||||||||||| Sbjct: 46963 taaatccaagtattgctctgcggaataccattgatgaatggatgcatagaaatgaggcag 46904 Query: 645 ccaaacttgacgcagcctgtaaatc-----cttgtgagagttcagaaattgatattttac 699 | |||||||||| ||| |||| || | | ||| |||||||| ||||||||| | Sbjct: 46903 cgaaacttgacgttgcccgtaagtcattaacctctgattgttcagaaggtgatattttgc 46844 Query: 700 aagcacttgaatatgcagtgaagatatgtcagagaagtagatccaacagccatgtagtga 759 |||| ||||| |||| | | ||||||| |||||||||||||||| || ||| |||||| Sbjct: 46843 aagctcttgagtatgttgcggagatatgccagagaagtagatccagtagacatttagtga 46784 Query: 760 ggaagcttggattgataagcttgattgctgac---ttgaagaatagcagtacaaaagtgc 816 |||| |||| ||||| ||||||||| ||||| ||||||||||||||| ||||||| | Sbjct: 46783 ggaaagttgggttgattagcttgattactgacttgttgaagaatagcagtccaaaagtac 46724 Query: 817 ggcaaaaagcattgg 831 | ||||| ||||||| Sbjct: 46723 gtcaaaaggcattgg 46709 Score = 97.6 bits (49), Expect = 8e-17 Identities = 107/125 (85%), Gaps = 1/125 (0%) Strand = Plus / Minus Query: 879 agaatgagattgctttgggggacaacattcacacaactgtgaagttcttatctcatgggc 938 ||||||| |||||| |||||||| |||| ||| | ||||||||||||| |||||||| Sbjct: 46589 agaatgaaattgctgctggggacaatattcgcactattgtgaagttcttaaatcatgggc 46530 Query: 939 acatccaggcgaaagaacaggctgtgtgtttgttatatgaactttcaggaatataaaccc 998 || |||| ||||||||||||||| | ||||||||||||||||||| ||||||||||| Sbjct: 46529 actcacaggagaaagaacaggctgtatctttgttatatgaactttca-gaatataaacct 46471 Query: 999 ctttc 1003 ||||| Sbjct: 46470 ctttc 46466