BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst032d21 (897 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT837975.1| Oryza sativa (indica cultivar-group) cDNA clone:... 468 e-128 ref|NM_001062918.1| Oryza sativa (japonica cultivar-group) Os05g... 458 e-125 dbj|AB095440.1| Oryza sativa (japonica cultivar-group) OsHAP3C m... 458 e-125 gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome... 238 3e-59 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 238 3e-59 >emb|CT837975.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA013H22, full insert sequence Length = 880 Score = 468 bits (236), Expect = e-128 Identities = 381/428 (89%), Gaps = 1/428 (0%) Strand = Plus / Plus Query: 190 gcggcggcggcgggggaggagggggagcgagggagccggaccggttcctgccgatcgcca 249 ||||||||||||| ||||| || | || || ||||| ||||||||||||||||||||||| Sbjct: 183 gcggcggcggcggcggaggcggagtagggaaggagcaggaccggttcctgccgatcgcca 242 Query: 250 acatcgggcgcatcatgcggcggggcgtgccggagaacgggaagatcgccaaggacgcca 309 ||||||| ||||||||||| |||| ||||||||||||||| ||||||||||||||| ||| Sbjct: 243 acatcggccgcatcatgcgccgggccgtgccggagaacggcaagatcgccaaggactcca 302 Query: 310 aggagtccgtccaggagtgcctctccgagttcatcagcttcatcaccagcgaagcgagtg 369 |||||||||||||||||||| |||||||||||||||||||||||||||||||||| || | Sbjct: 303 aggagtccgtccaggagtgcgtctccgagttcatcagcttcatcaccagcgaagcaagcg 362 Query: 370 acaagtgcatgaaggagaagcggaagaccatcaacggagacgacctgatctggtccatgg 429 |||||||| | ||||||||||| ||||||||||| || ||||||||||||||||| |||| Sbjct: 363 acaagtgcctcaaggagaagcgcaagaccatcaatggggacgacctgatctggtcaatgg 422 Query: 430 gtacgctcggctttgaggactacgtcgagccccttaagctctacctcaagctctaccggg 489 | |||||||| || |||||||| |||||||| || ||||||||||||| ||||||||||| Sbjct: 423 gcacgctcggattcgaggactatgtcgagcctctcaagctctacctcaggctctaccggg 482 Query: 490 agacggagggtgacacaaagggatcaagatcttctgagcaggcaggaaagaaagagattg 549 |||||||||||||||||||||| |||||| ||||||| | | ||| ||||||||| ||| Sbjct: 483 agacggagggtgacacaaagggttcaagagcttctgaactgccagtaaagaaagatgttg 542 Query: 550 tacttaacgggcaacctggaccatcgtttgagggcatgttgggtgaaggagggtgatact 609 ||||||| || | |||||| |||||||||| ||||||| || | ||||| |||||||| Sbjct: 543 tacttaatggagatcctggatcatcgtttgaaggcatgtaggacg-aggagtgtgatact 601 Query: 610 gattggca 617 |||||||| Sbjct: 602 gattggca 609 Score = 115 bits (58), Expect = 3e-22 Identities = 80/86 (93%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 60 agatccggcggccggtcgcgtcctccttccgctcccacccaccccaaccaacggcgctga 119 |||||||||||||||| |||||||||| || ||||| || ||||||||||||||||||| Sbjct: 45 agatccggcggccggtggcgtcctcctccctctccctcct-ccccaaccaacggcgctga 103 Query: 120 tcccctccgccatctccgtccatctc 145 |||||||||||||||||||||||||| Sbjct: 104 tcccctccgccatctccgtccatctc 129 >ref|NM_001062918.1| Oryza sativa (japonica cultivar-group) Os05g0573500 (Os05g0573500) mRNA, complete cds Length = 822 Score = 458 bits (231), Expect = e-125 Identities = 357/399 (89%) Strand = Plus / Plus Query: 190 gcggcggcggcgggggaggagggggagcgagggagccggaccggttcctgccgatcgcca 249 ||||||||||||| ||||| || | || || ||||| ||||||||||||||||||||||| Sbjct: 140 gcggcggcggcggcggaggcggagtagggaaggagcaggaccggttcctgccgatcgcca 199 Query: 250 acatcgggcgcatcatgcggcggggcgtgccggagaacgggaagatcgccaaggacgcca 309 ||||||| ||||||||||| |||| ||||||||||||||| ||||||||||||||| ||| Sbjct: 200 acatcggccgcatcatgcgccgggccgtgccggagaacggcaagatcgccaaggactcca 259 Query: 310 aggagtccgtccaggagtgcctctccgagttcatcagcttcatcaccagcgaagcgagtg 369 |||||||||||||||||||| |||||||||||||||||||||||||||||||||| || | Sbjct: 260 aggagtccgtccaggagtgcgtctccgagttcatcagcttcatcaccagcgaagcaagcg 319 Query: 370 acaagtgcatgaaggagaagcggaagaccatcaacggagacgacctgatctggtccatgg 429 |||||||| | ||||||||||| ||||||||||| || ||||||||||||||||| |||| Sbjct: 320 acaagtgcctcaaggagaagcgcaagaccatcaatggggacgacctgatctggtcaatgg 379 Query: 430 gtacgctcggctttgaggactacgtcgagccccttaagctctacctcaagctctaccggg 489 | |||||||| || |||||||| |||||||| || ||||||||||||| ||||||||||| Sbjct: 380 gcacgctcggattcgaggactatgtcgagcctctcaagctctacctcaggctctaccggg 439 Query: 490 agacggagggtgacacaaagggatcaagatcttctgagcaggcaggaaagaaagagattg 549 |||||||||||||||||||||| |||||| ||||||| | | ||| ||||||||| ||| Sbjct: 440 agacggagggtgacacaaagggttcaagagcttctgaactgccagtaaagaaagatgttg 499 Query: 550 tacttaacgggcaacctggaccatcgtttgagggcatgt 588 ||||||| || | |||||| |||||||||| ||||||| Sbjct: 500 tacttaatggagatcctggatcatcgtttgaaggcatgt 538 Score = 115 bits (58), Expect = 3e-22 Identities = 80/86 (93%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 60 agatccggcggccggtcgcgtcctccttccgctcccacccaccccaaccaacggcgctga 119 |||||||||||||||| |||||||||| || ||||| || ||||||||||||||||||| Sbjct: 5 agatccggcggccggtggcgtcctcctccctctccctcct-ccccaaccaacggcgctga 63 Query: 120 tcccctccgccatctccgtccatctc 145 |||||||||||||||||||||||||| Sbjct: 64 tcccctccgccatctccgtccatctc 89 >dbj|AB095440.1| Oryza sativa (japonica cultivar-group) OsHAP3C mRNA for HAP3, complete cds Length = 837 Score = 458 bits (231), Expect = e-125 Identities = 357/399 (89%) Strand = Plus / Plus Query: 190 gcggcggcggcgggggaggagggggagcgagggagccggaccggttcctgccgatcgcca 249 ||||||||||||| ||||| || | || || ||||| ||||||||||||||||||||||| Sbjct: 140 gcggcggcggcggcggaggcggagtagggaaggagcaggaccggttcctgccgatcgcca 199 Query: 250 acatcgggcgcatcatgcggcggggcgtgccggagaacgggaagatcgccaaggacgcca 309 ||||||| ||||||||||| |||| ||||||||||||||| ||||||||||||||| ||| Sbjct: 200 acatcggccgcatcatgcgccgggccgtgccggagaacggcaagatcgccaaggactcca 259 Query: 310 aggagtccgtccaggagtgcctctccgagttcatcagcttcatcaccagcgaagcgagtg 369 |||||||||||||||||||| |||||||||||||||||||||||||||||||||| || | Sbjct: 260 aggagtccgtccaggagtgcgtctccgagttcatcagcttcatcaccagcgaagcaagcg 319 Query: 370 acaagtgcatgaaggagaagcggaagaccatcaacggagacgacctgatctggtccatgg 429 |||||||| | ||||||||||| ||||||||||| || ||||||||||||||||| |||| Sbjct: 320 acaagtgcctcaaggagaagcgcaagaccatcaatggggacgacctgatctggtcaatgg 379 Query: 430 gtacgctcggctttgaggactacgtcgagccccttaagctctacctcaagctctaccggg 489 | |||||||| || |||||||| |||||||| || ||||||||||||| ||||||||||| Sbjct: 380 gcacgctcggattcgaggactatgtcgagcctctcaagctctacctcaggctctaccggg 439 Query: 490 agacggagggtgacacaaagggatcaagatcttctgagcaggcaggaaagaaagagattg 549 |||||||||||||||||||||| |||||| ||||||| | | ||| ||||||||| ||| Sbjct: 440 agacggagggtgacacaaagggttcaagagcttctgaactgccagtaaagaaagatgttg 499 Query: 550 tacttaacgggcaacctggaccatcgtttgagggcatgt 588 ||||||| || | |||||| |||||||||| ||||||| Sbjct: 500 tacttaatggagatcctggatcatcgtttgaaggcatgt 538 Score = 115 bits (58), Expect = 3e-22 Identities = 80/86 (93%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 60 agatccggcggccggtcgcgtcctccttccgctcccacccaccccaaccaacggcgctga 119 |||||||||||||||| |||||||||| || ||||| || ||||||||||||||||||| Sbjct: 5 agatccggcggccggtggcgtcctcctccctctccctcct-ccccaaccaacggcgctga 63 Query: 120 tcccctccgccatctccgtccatctc 145 |||||||||||||||||||||||||| Sbjct: 64 tcccctccgccatctccgtccatctc 89 >gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 238 bits (120), Expect = 3e-59 Identities = 159/172 (92%) Strand = Plus / Plus Query: 190 gcggcggcggcgggggaggagggggagcgagggagccggaccggttcctgccgatcgcca 249 ||||||||||||| ||||| || | || || ||||| ||||||||||||||||||||||| Sbjct: 136593 gcggcggcggcggcggaggcggagtagggaaggagcaggaccggttcctgccgatcgcca 136652 Query: 250 acatcgggcgcatcatgcggcggggcgtgccggagaacgggaagatcgccaaggacgcca 309 ||||||| ||||||||||| |||| ||||||||||||||| ||||||||||||||| ||| Sbjct: 136653 acatcggccgcatcatgcgccgggccgtgccggagaacggcaagatcgccaaggactcca 136712 Query: 310 aggagtccgtccaggagtgcctctccgagttcatcagcttcatcaccagcga 361 |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 136713 aggagtccgtccaggagtgcgtctccgagttcatcagcttcatcaccagcga 136764 Score = 141 bits (71), Expect = 6e-30 Identities = 110/123 (89%) Strand = Plus / Plus Query: 369 gacaagtgcatgaaggagaagcggaagaccatcaacggagacgacctgatctggtccatg 428 ||||||||| | ||||||||||| ||||||||||| || ||||||||||||||||| ||| Sbjct: 136928 gacaagtgcctcaaggagaagcgcaagaccatcaatggggacgacctgatctggtcaatg 136987 Query: 429 ggtacgctcggctttgaggactacgtcgagccccttaagctctacctcaagctctaccgg 488 || |||||||| || |||||||| |||||||| || ||||||||||||| |||||||||| Sbjct: 136988 ggcacgctcggattcgaggactatgtcgagcctctcaagctctacctcaggctctaccgg 137047 Query: 489 gag 491 ||| Sbjct: 137048 gag 137050 Score = 115 bits (58), Expect = 3e-22 Identities = 80/86 (93%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 60 agatccggcggccggtcgcgtcctccttccgctcccacccaccccaaccaacggcgctga 119 |||||||||||||||| |||||||||| || ||||| || ||||||||||||||||||| Sbjct: 136381 agatccggcggccggtggcgtcctcctccctctccctcct-ccccaaccaacggcgctga 136439 Query: 120 tcccctccgccatctccgtccatctc 145 |||||||||||||||||||||||||| Sbjct: 136440 tcccctccgccatctccgtccatctc 136465 >dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 238 bits (120), Expect = 3e-59 Identities = 159/172 (92%) Strand = Plus / Plus Query: 190 gcggcggcggcgggggaggagggggagcgagggagccggaccggttcctgccgatcgcca 249 ||||||||||||| ||||| || | || || ||||| ||||||||||||||||||||||| Sbjct: 28352351 gcggcggcggcggcggaggcggagtagggaaggagcaggaccggttcctgccgatcgcca 28352410 Query: 250 acatcgggcgcatcatgcggcggggcgtgccggagaacgggaagatcgccaaggacgcca 309 ||||||| ||||||||||| |||| ||||||||||||||| ||||||||||||||| ||| Sbjct: 28352411 acatcggccgcatcatgcgccgggccgtgccggagaacggcaagatcgccaaggactcca 28352470 Query: 310 aggagtccgtccaggagtgcctctccgagttcatcagcttcatcaccagcga 361 |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 28352471 aggagtccgtccaggagtgcgtctccgagttcatcagcttcatcaccagcga 28352522 Score = 141 bits (71), Expect = 6e-30 Identities = 110/123 (89%) Strand = Plus / Plus Query: 369 gacaagtgcatgaaggagaagcggaagaccatcaacggagacgacctgatctggtccatg 428 ||||||||| | ||||||||||| ||||||||||| || ||||||||||||||||| ||| Sbjct: 28352686 gacaagtgcctcaaggagaagcgcaagaccatcaatggggacgacctgatctggtcaatg 28352745 Query: 429 ggtacgctcggctttgaggactacgtcgagccccttaagctctacctcaagctctaccgg 488 || |||||||| || |||||||| |||||||| || ||||||||||||| |||||||||| Sbjct: 28352746 ggcacgctcggattcgaggactatgtcgagcctctcaagctctacctcaggctctaccgg 28352805 Query: 489 gag 491 ||| Sbjct: 28352806 gag 28352808 Score = 127 bits (64), Expect = 8e-26 Identities = 124/144 (86%) Strand = Plus / Minus Query: 218 gagggagccggaccggttcctgccgatcgccaacatcgggcgcatcatgcggcggggcgt 277 |||||||| |||| ||||||| || |||||||||||| | ||||||||| | || | | Sbjct: 22628476 gagggagcaggacaggttcctccccatcgccaacatcagccgcatcatgaagaaggccat 22628417 Query: 278 gccggagaacgggaagatcgccaaggacgccaaggagtccgtccaggagtgcctctccga 337 |||| |||||||||||||||||||||||||||||| |||| ||||||||| ||||||| Sbjct: 22628416 cccggccaacgggaagatcgccaaggacgccaaggagaccgtgcaggagtgcgtctccga 22628357 Query: 338 gttcatcagcttcatcaccagcga 361 ||||||| ||||||||||||||| Sbjct: 22628356 gttcatctccttcatcaccagcga 22628333 Score = 115 bits (58), Expect = 3e-22 Identities = 80/86 (93%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 60 agatccggcggccggtcgcgtcctccttccgctcccacccaccccaaccaacggcgctga 119 |||||||||||||||| |||||||||| || ||||| || ||||||||||||||||||| Sbjct: 28352139 agatccggcggccggtggcgtcctcctccctctccctcct-ccccaaccaacggcgctga 28352197 Query: 120 tcccctccgccatctccgtccatctc 145 |||||||||||||||||||||||||| Sbjct: 28352198 tcccctccgccatctccgtccatctc 28352223