BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst032b13 (821 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001056379.1| Oryza sativa (japonica cultivar-group) Os03g... 416 e-113 dbj|AK066846.1| Oryza sativa (japonica cultivar-group) cDNA clon... 416 e-113 emb|CT829699.1| Oryza sativa (indica cultivar-group) cDNA clone:... 406 e-110 gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome... 252 2e-63 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 252 2e-63 >ref|NM_001056379.1| Oryza sativa (japonica cultivar-group) Os03g0298600 (Os03g0298600) mRNA, complete cds Length = 806 Score = 416 bits (210), Expect = e-113 Identities = 333/374 (89%) Strand = Plus / Plus Query: 187 ccgccccgctggatacggccaggaacgccgccgccgccggggccagctccggacgtgccg 246 |||| |||||||||||| ||||||||||||||| |||||| |||||| |||| || || | Sbjct: 161 ccgctccgctggatacgcccaggaacgccgccggcgccggcgccagcgccgggcgcgcgg 220 Query: 247 aggtgcgggatttgaacgcgccattcgggacgtatgaggacgagcggatgccgctcgctg 306 |||||||||||||| ||| | | ||| | | |||||||| ||| |||||||| | | Sbjct: 221 aggtgcgggatttggcggcggcgtgcggactgcaggaggacgaccgggtgccgctctccg 280 Query: 307 aggtggtttcggactgcacgaggcggtggtttcaggacgcgcttaaggaggcgcgtgccg 366 ||||||| ||||||||||||||||||||| |||||| |||| |||||||| || |||| Sbjct: 281 aggtggtgctggactgcacgaggcggtggttccaggacacgctcaaggaggcccgcgccg 340 Query: 367 gcgacgccgccatgcaggtgctcgtcggccagatgtaccgcagcggctacggcgtcaata 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 341 gcgacgccgccatgcaggtgctcgtcggccagatgtaccgcagcggctacggcgtcaaca 400 Query: 427 agaacgagcacaaggctagaatttggatggagaaagcatcaagatatcgatctacagtct 486 ||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||| Sbjct: 401 agaacgagcacaaggctcaaatttggacggagaaagcatcacgatatcgatctacagtct 460 Query: 487 ggaaagtcagcaataaacgcccaggatacaatgctagtgactcagattcagatgatgcta 546 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 461 ggaaagttagcaacaaacgcccaggatacaatgctagtgactcagattcagatgattcca 520 Query: 547 aggacacaggcaaa 560 |||| ||||||||| Sbjct: 521 aggaaacaggcaaa 534 >dbj|AK066846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088A03, full insert sequence Length = 807 Score = 416 bits (210), Expect = e-113 Identities = 333/374 (89%) Strand = Plus / Plus Query: 187 ccgccccgctggatacggccaggaacgccgccgccgccggggccagctccggacgtgccg 246 |||| |||||||||||| ||||||||||||||| |||||| |||||| |||| || || | Sbjct: 161 ccgctccgctggatacgcccaggaacgccgccggcgccggcgccagcgccgggcgcgcgg 220 Query: 247 aggtgcgggatttgaacgcgccattcgggacgtatgaggacgagcggatgccgctcgctg 306 |||||||||||||| ||| | | ||| | | |||||||| ||| |||||||| | | Sbjct: 221 aggtgcgggatttggcggcggcgtgcggactgcaggaggacgaccgggtgccgctctccg 280 Query: 307 aggtggtttcggactgcacgaggcggtggtttcaggacgcgcttaaggaggcgcgtgccg 366 ||||||| ||||||||||||||||||||| |||||| |||| |||||||| || |||| Sbjct: 281 aggtggtgctggactgcacgaggcggtggttccaggacacgctcaaggaggcccgcgccg 340 Query: 367 gcgacgccgccatgcaggtgctcgtcggccagatgtaccgcagcggctacggcgtcaata 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 341 gcgacgccgccatgcaggtgctcgtcggccagatgtaccgcagcggctacggcgtcaaca 400 Query: 427 agaacgagcacaaggctagaatttggatggagaaagcatcaagatatcgatctacagtct 486 ||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||| Sbjct: 401 agaacgagcacaaggctcaaatttggacggagaaagcatcacgatatcgatctacagtct 460 Query: 487 ggaaagtcagcaataaacgcccaggatacaatgctagtgactcagattcagatgatgcta 546 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 461 ggaaagttagcaacaaacgcccaggatacaatgctagtgactcagattcagatgattcca 520 Query: 547 aggacacaggcaaa 560 |||| ||||||||| Sbjct: 521 aggaaacaggcaaa 534 >emb|CT829699.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA001E09, full insert sequence Length = 787 Score = 406 bits (205), Expect = e-110 Identities = 328/369 (88%) Strand = Plus / Plus Query: 192 ccgctggatacggccaggaacgccgccgccgccggggccagctccggacgtgccgaggtg 251 |||||||||||| ||||||||||||||| |||||| |||||| |||| || || |||||| Sbjct: 167 ccgctggatacgcccaggaacgccgccggcgccggcgccagcgccgggcgcgcggaggtg 226 Query: 252 cgggatttgaacgcgccattcgggacgtatgaggacgagcggatgccgctcgctgaggtg 311 ||| ||||| ||| | | |||| | | |||||||| ||| |||||||| | |||||| Sbjct: 227 cggaatttggcggcggcgtgcgggctgcaggaggacgaccgggtgccgctctccgaggtg 286 Query: 312 gtttcggactgcacgaggcggtggtttcaggacgcgcttaaggaggcgcgtgccggcgac 371 || ||||||||||||||||||||| |||||| |||| |||||||| || ||||||||| Sbjct: 287 gtgctggactgcacgaggcggtggttccaggacacgctcaaggaggcccgcgccggcgac 346 Query: 372 gccgccatgcaggtgctcgtcggccagatgtaccgcagcggctacggcgtcaataagaac 431 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 347 gccgccatgcaggtgctcgtcggccagatgtaccgcagcggctacggcgtcaacaagaac 406 Query: 432 gagcacaaggctagaatttggatggagaaagcatcaagatatcgatctacagtctggaaa 491 |||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 407 gagcacaaggctcaaatttggacggagaaagcatcacgatatcgatctacagtctggaaa 466 Query: 492 gtcagcaataaacgcccaggatacaatgctagtgactcagattcagatgatgctaaggac 551 || ||||| |||| ||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 467 gttagcaacaaacacccaggatacaatgctagtgactcagattcagatgattccaaggaa 526 Query: 552 acaggcaaa 560 ||||||||| Sbjct: 527 acaggcaaa 535 >gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 252 bits (127), Expect = 2e-63 Identities = 223/255 (87%) Strand = Plus / Minus Query: 187 ccgccccgctggatacggccaggaacgccgccgccgccggggccagctccggacgtgccg 246 |||| |||||||||||| ||||||||||||||| |||||| |||||| |||| || || | Sbjct: 98256 ccgctccgctggatacgcccaggaacgccgccggcgccggcgccagcgccgggcgcgcgg 98197 Query: 247 aggtgcgggatttgaacgcgccattcgggacgtatgaggacgagcggatgccgctcgctg 306 |||||||||||||| ||| | | ||| | | |||||||| ||| |||||||| | | Sbjct: 98196 aggtgcgggatttggcggcggcgtgcggactgcaggaggacgaccgggtgccgctctccg 98137 Query: 307 aggtggtttcggactgcacgaggcggtggtttcaggacgcgcttaaggaggcgcgtgccg 366 ||||||| ||||||||||||||||||||| |||||| |||| |||||||| || |||| Sbjct: 98136 aggtggtgctggactgcacgaggcggtggttccaggacacgctcaaggaggcccgcgccg 98077 Query: 367 gcgacgccgccatgcaggtgctcgtcggccagatgtaccgcagcggctacggcgtcaata 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 98076 gcgacgccgccatgcaggtgctcgtcggccagatgtaccgcagcggctacggcgtcaaca 98017 Query: 427 agaacgagcacaagg 441 ||||||||||||||| Sbjct: 98016 agaacgagcacaagg 98002 Score = 99.6 bits (50), Expect = 2e-17 Identities = 62/66 (93%) Strand = Plus / Minus Query: 446 aatttggatggagaaagcatcaagatatcgatctacagtctggaaagtcagcaataaacg 505 |||||||| ||||||||||||| ||||||||||||||||||||||||| ||||| ||||| Sbjct: 97067 aatttggacggagaaagcatcacgatatcgatctacagtctggaaagttagcaacaaacg 97008 Query: 506 cccagg 511 |||||| Sbjct: 97007 cccagg 97002 Score = 81.8 bits (41), Expect = 4e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 508 caggatacaatgctagtgactcagattcagatgatgctaaggacacaggcaaa 560 ||||||||||||||||||||||||||||||||||| | ||||| ||||||||| Sbjct: 96772 caggatacaatgctagtgactcagattcagatgattccaaggaaacaggcaaa 96720 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 252 bits (127), Expect = 2e-63 Identities = 223/255 (87%) Strand = Plus / Minus Query: 187 ccgccccgctggatacggccaggaacgccgccgccgccggggccagctccggacgtgccg 246 |||| |||||||||||| ||||||||||||||| |||||| |||||| |||| || || | Sbjct: 10439804 ccgctccgctggatacgcccaggaacgccgccggcgccggcgccagcgccgggcgcgcgg 10439745 Query: 247 aggtgcgggatttgaacgcgccattcgggacgtatgaggacgagcggatgccgctcgctg 306 |||||||||||||| ||| | | ||| | | |||||||| ||| |||||||| | | Sbjct: 10439744 aggtgcgggatttggcggcggcgtgcggactgcaggaggacgaccgggtgccgctctccg 10439685 Query: 307 aggtggtttcggactgcacgaggcggtggtttcaggacgcgcttaaggaggcgcgtgccg 366 ||||||| ||||||||||||||||||||| |||||| |||| |||||||| || |||| Sbjct: 10439684 aggtggtgctggactgcacgaggcggtggttccaggacacgctcaaggaggcccgcgccg 10439625 Query: 367 gcgacgccgccatgcaggtgctcgtcggccagatgtaccgcagcggctacggcgtcaata 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 10439624 gcgacgccgccatgcaggtgctcgtcggccagatgtaccgcagcggctacggcgtcaaca 10439565 Query: 427 agaacgagcacaagg 441 ||||||||||||||| Sbjct: 10439564 agaacgagcacaagg 10439550 Score = 99.6 bits (50), Expect = 2e-17 Identities = 62/66 (93%) Strand = Plus / Minus Query: 446 aatttggatggagaaagcatcaagatatcgatctacagtctggaaagtcagcaataaacg 505 |||||||| ||||||||||||| ||||||||||||||||||||||||| ||||| ||||| Sbjct: 10438615 aatttggacggagaaagcatcacgatatcgatctacagtctggaaagttagcaacaaacg 10438556 Query: 506 cccagg 511 |||||| Sbjct: 10438555 cccagg 10438550 Score = 81.8 bits (41), Expect = 4e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 508 caggatacaatgctagtgactcagattcagatgatgctaaggacacaggcaaa 560 ||||||||||||||||||||||||||||||||||| | ||||| ||||||||| Sbjct: 10438320 caggatacaatgctagtgactcagattcagatgattccaaggaaacaggcaaa 10438268