BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst031p13 (1113 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001056082.1| Oryza sativa (japonica cultivar-group) Os03g... 724 0.0 dbj|AK100847.1| Oryza sativa (japonica cultivar-group) cDNA clon... 724 0.0 gb|DQ244991.1| Zea mays clone 12072 mRNA sequence 547 e-152 gb|AY105486.1| Zea mays PCO104538 mRNA sequence 527 e-146 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 220 9e-54 >ref|NM_001056082.1| Oryza sativa (japonica cultivar-group) Os03g0247000 (Os03g0247000) mRNA, complete cds Length = 1093 Score = 724 bits (365), Expect = 0.0 Identities = 638/728 (87%), Gaps = 12/728 (1%) Strand = Plus / Plus Query: 33 cccccgaaaacctccgcccgccatggcgaccgccttccaggccgccaccgccgccttcct 92 |||||||||||||||||||||||||||||||||| |||||||||| |||| || ||||| Sbjct: 53 cccccgaaaacctccgcccgccatggcgaccgccgcccaggccgccgccgcggcgttcct 112 Query: 93 ctccttcgtctcctcctcccccc---accacaccgttccctcctcatctaccgtttcctt 149 ||||||| ||||||||||||| | ||||||||| ||||| || || ||| ||||| Sbjct: 113 ctccttcctctcctcctccccgccgcaccacaccgcgccctcatcctc---cgtctcctt 169 Query: 150 cctggcaaccc------tgcccgcctccctccgggccgctgccgcgggggggccacccct 203 ||||||| ||| |||||||||||||| ||||||||||||||||| ||| | Sbjct: 170 cctggcagcccgtgtgctgcccgcctccctcagggccgctgccgcggggtccccaacttc 229 Query: 204 cccctcccgctgccggggccgccgtgtcgccgccgtcgtctctcagctccccactacgaa 263 | ||||||||| ||||||||| ||||||| ||||||||| ||||||||||||| |||| Sbjct: 230 cgcctcccgctcccggggccgaggtgtcgcggccgtcgtcgctcagctccccaccgcgaa 289 Query: 264 tgcagaggtagcttctggggagaagaaaatcctgtggtcatcaagggcggtgcggtcatt 323 | ||||||| ||||||||||||||||| |||| |||||||||| | |||||| ||||||| Sbjct: 290 tccagaggtggcttctggggagaagaagatccggtggtcatcacgagcggtgaggtcatt 349 Query: 324 tgcaatggcggagctggaggcacggaagatgaggtacccaaccacaggaactgaggggct 383 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || || Sbjct: 350 tgcaatggcggagctggaggctcggaagatgaggtacccaaccactggcactgaaggact 409 Query: 384 tcttatgggcatcctcgtcgagggaactagcgacgcagcaaagcttatgcgtgctagtgg 443 || ||||||||||| |||||||||||||| || |||||||| ||| ||||||||| ||| Sbjct: 410 cctcatgggcatccttgtcgagggaactagtgatgcagcaaaacttttgcgtgctaatgg 469 Query: 444 aattacgctgctcaaagtgcgtgaggaagcagcgaatgtacttgggaagtcagaaatgtt 503 ||||||||||||||||||||| ||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 470 aattacgctgctcaaagtgcgcgaggaggcagcaaatgtgcttgggaaatcagaaatgtt 529 Query: 504 ttacttcagtcctatgcatccaccactgacagaagctgcacaacgagcccttgattgggc 563 ||||| ||||||||||| |||||| |||| ||||||||||||||||| ||||||||||| Sbjct: 530 ctactttagtcctatgcacccaccattgactgaagctgcacaacgagcgcttgattgggc 589 Query: 564 tttaaatgaaaaactgaaatcaggtgaggacggagaggtaacggccaatcatttgttcct 623 | | ||||||||||||||||||||||| || ||||| ||||| ||||||||| || |||| Sbjct: 590 tatcaatgaaaaactgaaatcaggtgaagatggagaagtaaccgccaatcatctgctcct 649 Query: 624 ggggatatggtcagataaagagtcagctggtcataagatactggcttcccttggttttga 683 |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 650 ggggatatggtcagataaagagtcagctggtcataaagtattggcttcccttggttttga 709 Query: 684 tgatgagaaagccagtttgctggccaaaacggatggcgaagaggctgcaatgagtcctag 743 |||||||| ||||| || ||||||||||||| ||| ||||||||||| ||||||||||| Sbjct: 710 tgatgagagagccaattcactggccaaaacggctggtgaagaggctgctatgagtcctag 769 Query: 744 atagcaaa 751 |||||||| Sbjct: 770 atagcaaa 777 >dbj|AK100847.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123H08, full insert sequence Length = 1094 Score = 724 bits (365), Expect = 0.0 Identities = 638/728 (87%), Gaps = 12/728 (1%) Strand = Plus / Plus Query: 33 cccccgaaaacctccgcccgccatggcgaccgccttccaggccgccaccgccgccttcct 92 |||||||||||||||||||||||||||||||||| |||||||||| |||| || ||||| Sbjct: 54 cccccgaaaacctccgcccgccatggcgaccgccgcccaggccgccgccgcggcgttcct 113 Query: 93 ctccttcgtctcctcctcccccc---accacaccgttccctcctcatctaccgtttcctt 149 ||||||| ||||||||||||| | ||||||||| ||||| || || ||| ||||| Sbjct: 114 ctccttcctctcctcctccccgccgcaccacaccgcgccctcatcctc---cgtctcctt 170 Query: 150 cctggcaaccc------tgcccgcctccctccgggccgctgccgcgggggggccacccct 203 ||||||| ||| |||||||||||||| ||||||||||||||||| ||| | Sbjct: 171 cctggcagcccgtgtgctgcccgcctccctcagggccgctgccgcggggtccccaacttc 230 Query: 204 cccctcccgctgccggggccgccgtgtcgccgccgtcgtctctcagctccccactacgaa 263 | ||||||||| ||||||||| ||||||| ||||||||| ||||||||||||| |||| Sbjct: 231 cgcctcccgctcccggggccgaggtgtcgcggccgtcgtcgctcagctccccaccgcgaa 290 Query: 264 tgcagaggtagcttctggggagaagaaaatcctgtggtcatcaagggcggtgcggtcatt 323 | ||||||| ||||||||||||||||| |||| |||||||||| | |||||| ||||||| Sbjct: 291 tccagaggtggcttctggggagaagaagatccggtggtcatcacgagcggtgaggtcatt 350 Query: 324 tgcaatggcggagctggaggcacggaagatgaggtacccaaccacaggaactgaggggct 383 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || || Sbjct: 351 tgcaatggcggagctggaggctcggaagatgaggtacccaaccactggcactgaaggact 410 Query: 384 tcttatgggcatcctcgtcgagggaactagcgacgcagcaaagcttatgcgtgctagtgg 443 || ||||||||||| |||||||||||||| || |||||||| ||| ||||||||| ||| Sbjct: 411 cctcatgggcatccttgtcgagggaactagtgatgcagcaaaacttttgcgtgctaatgg 470 Query: 444 aattacgctgctcaaagtgcgtgaggaagcagcgaatgtacttgggaagtcagaaatgtt 503 ||||||||||||||||||||| ||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 471 aattacgctgctcaaagtgcgcgaggaggcagcaaatgtgcttgggaaatcagaaatgtt 530 Query: 504 ttacttcagtcctatgcatccaccactgacagaagctgcacaacgagcccttgattgggc 563 ||||| ||||||||||| |||||| |||| ||||||||||||||||| ||||||||||| Sbjct: 531 ctactttagtcctatgcacccaccattgactgaagctgcacaacgagcgcttgattgggc 590 Query: 564 tttaaatgaaaaactgaaatcaggtgaggacggagaggtaacggccaatcatttgttcct 623 | | ||||||||||||||||||||||| || ||||| ||||| ||||||||| || |||| Sbjct: 591 tatcaatgaaaaactgaaatcaggtgaagatggagaagtaaccgccaatcatctgctcct 650 Query: 624 ggggatatggtcagataaagagtcagctggtcataagatactggcttcccttggttttga 683 |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 651 ggggatatggtcagataaagagtcagctggtcataaagtattggcttcccttggttttga 710 Query: 684 tgatgagaaagccagtttgctggccaaaacggatggcgaagaggctgcaatgagtcctag 743 |||||||| ||||| || ||||||||||||| ||| ||||||||||| ||||||||||| Sbjct: 711 tgatgagagagccaattcactggccaaaacggctggtgaagaggctgctatgagtcctag 770 Query: 744 atagcaaa 751 |||||||| Sbjct: 771 atagcaaa 778 >gb|DQ244991.1| Zea mays clone 12072 mRNA sequence Length = 943 Score = 547 bits (276), Expect = e-152 Identities = 510/588 (86%) Strand = Plus / Plus Query: 163 cccgcctccctccgggccgctgccgcgggggggccacccctcccctcccgctgccggggc 222 |||| |||||| |||||||||| | | || || |||| ||| ||||||| ||||| | Sbjct: 130 cccgtctcccttcgggccgctgtcacaggtggcccacggctcgcctcccgtctccgggtc 189 Query: 223 cgccgtgtcgccgccgtcgtctctcagctccccactacgaatgcagaggtagcttctggg 282 | ||| |||| ||||| |||| | ||||| ||||| |||||| | ||||||||||||||| Sbjct: 190 caccgcgtcggcgccgccgtcgcccagcttcccaccacgaatccggaggtagcttctggg 249 Query: 283 gagaagaaaatcctgtggtcatcaagggcggtgcggtcatttgcaatggcggagctggag 342 |||||||| ||| |||||||||||||| |||||||| ||||| ||||| ||||||||| Sbjct: 250 gagaagaagatcagatggtcatcaagggctgtgcggtcttttgcgatggcagagctggag 309 Query: 343 gcacggaagatgaggtacccaaccacaggaactgaggggcttcttatgggcatcctcgtc 402 || ||||||||||||||||| |||||||| || |||||||| || |||||||| || || Sbjct: 310 gcccggaagatgaggtaccctaccacaggcaccgaggggctcctcatgggcattcttgtt 369 Query: 403 gagggaactagcgacgcagcaaagcttatgcgtgctagtggaattacgctgctcaaagtg 462 || |||||||| | ||||||||| ||| ||||||||| ||||| || || ||||||||| Sbjct: 370 gaaggaactagtggcgcagcaaaacttttgcgtgctaatggaaccacacttctcaaagtg 429 Query: 463 cgtgaggaagcagcgaatgtacttgggaagtcagaaatgttttacttcagtcctatgcat 522 |||||||| ||||||||||| |||||||| ||||||||||||||||| ||||| |||||| Sbjct: 430 cgtgaggaggcagcgaatgttcttgggaaatcagaaatgttttactttagtcccatgcat 489 Query: 523 ccaccactgacagaagctgcacaacgagcccttgattgggctttaaatgaaaaactgaaa 582 |||||| ||||||||||||||||||||||||||||||||||| | ||||||||| ||||| Sbjct: 490 ccaccattgacagaagctgcacaacgagcccttgattgggctgtcaatgaaaaattgaaa 549 Query: 583 tcaggtgaggacggagaggtaacggccaatcatttgttcctggggatatggtcagataaa 642 ||||||||||| ||||| ||||| |||||||||||| | ||||||||||||||||||||| Sbjct: 550 tcaggtgaggatggagaagtaaccgccaatcatttgctactggggatatggtcagataaa 609 Query: 643 gagtcagctggtcataagatactggcttcccttggttttgatgatgagaaagccagtttg 702 ||||| ||||||||||| || ||| ||| ||||| ||||| ||||||||||||||||| Sbjct: 610 gagtcggctggtcataaaatcctgtattcgcttggatttgacgatgagaaagccagttta 669 Query: 703 ctggccaaaacggatggcgaagaggctgcaatgagtcctagatagcaa 750 ||||||||||||| ||| ||||||||||||||||||| |||| ||||| Sbjct: 670 ctggccaaaacggctggtgaagaggctgcaatgagtcttagagagcaa 717 >gb|AY105486.1| Zea mays PCO104538 mRNA sequence Length = 1046 Score = 527 bits (266), Expect = e-146 Identities = 509/590 (86%) Strand = Plus / Plus Query: 163 cccgcctccctccgggccgctgccgcgggggggccacccctcccctcccgctgccggggc 222 |||| |||||| |||||||||| | | || || |||| ||| ||||||| ||||| | Sbjct: 135 cccgtctcccttcgggccgctgtcacaggtggcccacggctcgcctcccgtctccgggtc 194 Query: 223 cgccgtgtcgccgccgtcgtctctcagctccccactacgaatgcagaggtagcttctggg 282 ||||| |||| |||| |||| | ||||||||||| ||| || ||||||||| ||||||| Sbjct: 195 cgccgcgtcggtgccgccgtcgcccagctccccaccacgcatccagaggtagtttctggg 254 Query: 283 gagaagaaaatcctgtggtcatcaagggcggtgcggtcatttgcaatggcggagctggag 342 |||||||| ||| |||||||||||||| |||||||| ||||| ||||| ||||||||| Sbjct: 255 gagaagaagatcagatggtcatcaagggctgtgcggtcttttgcgatggcagagctggag 314 Query: 343 gcacggaagatgaggtacccaaccacaggaactgaggggcttcttatgggcatcctcgtc 402 || ||||||||||||||||| |||||||| || |||||||| || |||||||| || || Sbjct: 315 gcccggaagatgaggtaccctaccacaggcaccgaggggctcctcatgggcattcttgtt 374 Query: 403 gagggaactagcgacgcagcaaagcttatgcgtgctagtggaattacgctgctcaaagtg 462 || |||||||| | ||||||||| ||| ||||||||| ||||| || || ||||||||| Sbjct: 375 gaaggaactagtggcgcagcaaaacttttgcgtgctaatggaaccacacttctcaaagtg 434 Query: 463 cgtgaggaagcagcgaatgtacttgggaagtcagaaatgttttacttcagtcctatgcat 522 |||||||| ||||||||||| |||||||| ||||||||||||||||| ||||| |||||| Sbjct: 435 cgtgaggaggcagcgaatgtgcttgggaaatcagaaatgttttactttagtcccatgcat 494 Query: 523 ccaccactgacagaagctgcacaacgagcccttgattgggctttaaatgaaaaactgaaa 582 |||||| ||||||||||||||||||||||||||||||||||| | ||||||||| ||||| Sbjct: 495 ccaccattgacagaagctgcacaacgagcccttgattgggctgtcaatgaaaaattgaaa 554 Query: 583 tcaggtgaggacggagaggtaacggccaatcatttgttcctggggatatggtcagataaa 642 ||||||||||| ||||| ||||| |||||||||||| | |||||||||||||||||| | Sbjct: 555 tcaggtgaggatggagaagtaaccgccaatcatttgctactggggatatggtcagatgac 614 Query: 643 gagtcagctggtcataagatactggcttcccttggttttgatgatgagaaagccagtttg 702 ||||| ||||||||||| || ||| ||| || || ||||| |||| |||||||||||| Sbjct: 615 gagtcggctggtcataaaatcctgtattcgctcggatttgacgatgtgaaagccagttta 674 Query: 703 ctggccaaaacggatggcgaagaggctgcaatgagtcctagatagcaaag 752 ||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 675 ctggccaaaacggctgacgaggaggctgcaatgagtcctagatagcaaag 724 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 220 bits (111), Expect = 9e-54 Identities = 165/183 (90%) Strand = Plus / Minus Query: 406 ggaactagcgacgcagcaaagcttatgcgtgctagtggaattacgctgctcaaagtgcgt 465 |||||||| || |||||||| ||| ||||||||| |||||||||||||||||||||||| Sbjct: 7745556 ggaactagtgatgcagcaaaacttttgcgtgctaatggaattacgctgctcaaagtgcgc 7745497 Query: 466 gaggaagcagcgaatgtacttgggaagtcagaaatgttttacttcagtcctatgcatcca 525 ||||| ||||| ||||| |||||||| ||||||||||| ||||| ||||||||||| ||| Sbjct: 7745496 gaggaggcagcaaatgtgcttgggaaatcagaaatgttctactttagtcctatgcaccca 7745437 Query: 526 ccactgacagaagctgcacaacgagcccttgattgggctttaaatgaaaaactgaaatca 585 ||| |||| ||||||||||||||||| |||||||||||| | |||||||||||||||||| Sbjct: 7745436 ccattgactgaagctgcacaacgagcgcttgattgggctatcaatgaaaaactgaaatca 7745377 Query: 586 ggt 588 ||| Sbjct: 7745376 ggt 7745374 Score = 157 bits (79), Expect = 1e-34 Identities = 118/131 (90%) Strand = Plus / Minus Query: 585 aggtgaggacggagaggtaacggccaatcatttgttcctggggatatggtcagataaaga 644 |||||| || ||||| ||||| ||||||||| || ||||||||||||||||||||||||| Sbjct: 7741870 aggtgaagatggagaagtaaccgccaatcatctgctcctggggatatggtcagataaaga 7741811 Query: 645 gtcagctggtcataagatactggcttcccttggttttgatgatgagaaagccagtttgct 704 ||||||||||||||| || ||||||||||||||||||||||||||| ||||| || || Sbjct: 7741810 gtcagctggtcataaagtattggcttcccttggttttgatgatgagagagccaattcact 7741751 Query: 705 ggccaaaacgg 715 ||||||||||| Sbjct: 7741750 ggccaaaacgg 7741740 Score = 149 bits (75), Expect = 3e-32 Identities = 195/234 (83%), Gaps = 12/234 (5%) Strand = Plus / Minus Query: 33 cccccgaaaacctccgcccgccatggcgaccgccttccaggccgccaccgccgccttcct 92 |||||||||||||||||||||||||||||||||| |||||||||| |||| || ||||| Sbjct: 7747245 cccccgaaaacctccgcccgccatggcgaccgccgcccaggccgccgccgcggcgttcct 7747186 Query: 93 ctccttcgtctcctcctcc---ccccaccacaccgttccctcctcatctaccgtttcctt 149 ||||||| ||||||||||| || |||||||||| | ||||||| |||| ||||| Sbjct: 7747185 ctccttcctctcctcctccccgccgcaccacaccg---cgccctcatcctccgtctcctt 7747129 Query: 150 cctggcaacc------ctgcccgcctccctccgggccgctgccgcgggggggccacccct 203 ||||||| || ||||||||||||||| ||||||||||||||||| ||| | Sbjct: 7747128 cctggcagcccgtgtgctgcccgcctccctcagggccgctgccgcggggtccccaacttc 7747069 Query: 204 cccctcccgctgccggggccgccgtgtcgccgccgtcgtctctcagctccccac 257 | ||||||||| ||||||||| ||||||| ||||||||| ||||||||||||| Sbjct: 7747068 cgcctcccgctcccggggccgaggtgtcgcggccgtcgtcgctcagctccccac 7747015 Score = 133 bits (67), Expect = 2e-27 Identities = 100/111 (90%) Strand = Plus / Minus Query: 297 gtggtcatcaagggcggtgcggtcatttgcaatggcggagctggaggcacggaagatgag 356 |||||||||| | |||||| |||||||||||||||||||||||||||| ||||||||||| Sbjct: 7746710 gtggtcatcacgagcggtgaggtcatttgcaatggcggagctggaggctcggaagatgag 7746651 Query: 357 gtacccaaccacaggaactgaggggcttcttatgggcatcctcgtcgaggg 407 |||||||||||| || ||||| || || || ||||||||||| |||||||| Sbjct: 7746650 gtacccaaccactggcactgaaggactcctcatgggcatccttgtcgaggg 7746600