BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst031o17 (1054 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001058247.1| Oryza sativa (japonica cultivar-group) Os03g... 299 1e-77 dbj|AK070263.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 1e-77 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 186 1e-43 gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic ... 186 1e-43 gb|AY109475.1| Zea mays CL21246_1 mRNA sequence 184 5e-43 >ref|NM_001058247.1| Oryza sativa (japonica cultivar-group) Os03g0819400 (Os03g0819400) mRNA, complete cds Length = 1073 Score = 299 bits (151), Expect = 1e-77 Identities = 223/247 (90%) Strand = Plus / Plus Query: 495 tgatgtgaagaacacacagacgcaagagcaggtagttgtactgaaggtctccctgcattg 554 ||||||||||||||| | |||||| |||||||| |||||||||||||| || ||||| || Sbjct: 458 tgatgtgaagaacactctgacgcaggagcaggtggttgtactgaaggtatcactgcactg 517 Query: 555 caaagcatgcgaaggcaaagtgaagaagcacctctccaagatggcaggtgtgacatcgtt 614 |||||| |||| ||||||||||||||||||||| ||||||||| ||| |||||||| || Sbjct: 518 caaagcgtgcgcgggcaaagtgaagaagcacctcgccaagatggaaggagtgacatcttt 577 Query: 615 cagcatagactccgcggcgaagaaggtgacggtggtcggcgacgtgacgccgctgggcgt 674 || |||||||| ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 578 caacatagacttcgcggcgaagaaggtgacggtggtcggcgacgtgacgccgctgggggt 637 Query: 675 cctcaacagcgtgtccaaggtgaagaacgcccagttctgggcgtcgcagccggccatcgc 734 || ||||||||||||||||||||||||||||||||||||||| ||| |||||| || || Sbjct: 638 gctgaacagcgtgtccaaggtgaagaacgcccagttctgggcggcgccgccggcgatagc 697 Query: 735 tgcctga 741 |||||| Sbjct: 698 cgcctga 704 Score = 131 bits (66), Expect = 6e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 168 catggctcctttgctcttcaaggacatgaaaagcctttcgtgctcatctccggcgtccac 227 |||||| |||||||| |||||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 92 catggcgcctttgctgttcaaggacatgaagagcctctcgtgctcgtcgccggcgtccac 151 Query: 228 tgcgatatgcccgagcctagagcggcagccgatggtccagtcacacaagg 277 ||||||||||||||| | ||||||||||||||||||| | ||||||||| Sbjct: 152 ggcgatatgcccgagcttggagcggcagccgatggtccggccacacaagg 201 Score = 117 bits (59), Expect = 9e-23 Identities = 86/95 (90%) Strand = Plus / Plus Query: 361 gcgaatggcggtgagctcgttagcccggccggctcgtccaggtacctgctgagtggccgt 420 ||||||||||| |||||||| ||||| |||||||| |||||||||||||| || |||| Sbjct: 309 gcgaatggcggcgagctcgtcagccccgccggctcatccaggtacctgctcagcagccgc 368 Query: 421 gccgtcgccgccgaggagatccaggaggtggaggc 455 |||| |||||||||||||||||||||||||||||| Sbjct: 369 gccgccgccgccgaggagatccaggaggtggaggc 403 >dbj|AK070263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043H06, full insert sequence Length = 1074 Score = 299 bits (151), Expect = 1e-77 Identities = 223/247 (90%) Strand = Plus / Plus Query: 495 tgatgtgaagaacacacagacgcaagagcaggtagttgtactgaaggtctccctgcattg 554 ||||||||||||||| | |||||| |||||||| |||||||||||||| || ||||| || Sbjct: 459 tgatgtgaagaacactctgacgcaggagcaggtggttgtactgaaggtatcactgcactg 518 Query: 555 caaagcatgcgaaggcaaagtgaagaagcacctctccaagatggcaggtgtgacatcgtt 614 |||||| |||| ||||||||||||||||||||| ||||||||| ||| |||||||| || Sbjct: 519 caaagcgtgcgcgggcaaagtgaagaagcacctcgccaagatggaaggagtgacatcttt 578 Query: 615 cagcatagactccgcggcgaagaaggtgacggtggtcggcgacgtgacgccgctgggcgt 674 || |||||||| ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 579 caacatagacttcgcggcgaagaaggtgacggtggtcggcgacgtgacgccgctgggggt 638 Query: 675 cctcaacagcgtgtccaaggtgaagaacgcccagttctgggcgtcgcagccggccatcgc 734 || ||||||||||||||||||||||||||||||||||||||| ||| |||||| || || Sbjct: 639 gctgaacagcgtgtccaaggtgaagaacgcccagttctgggcggcgccgccggcgatagc 698 Query: 735 tgcctga 741 |||||| Sbjct: 699 cgcctga 705 Score = 131 bits (66), Expect = 6e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 168 catggctcctttgctcttcaaggacatgaaaagcctttcgtgctcatctccggcgtccac 227 |||||| |||||||| |||||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 93 catggcgcctttgctgttcaaggacatgaagagcctctcgtgctcgtcgccggcgtccac 152 Query: 228 tgcgatatgcccgagcctagagcggcagccgatggtccagtcacacaagg 277 ||||||||||||||| | ||||||||||||||||||| | ||||||||| Sbjct: 153 ggcgatatgcccgagcttggagcggcagccgatggtccggccacacaagg 202 Score = 117 bits (59), Expect = 9e-23 Identities = 86/95 (90%) Strand = Plus / Plus Query: 361 gcgaatggcggtgagctcgttagcccggccggctcgtccaggtacctgctgagtggccgt 420 ||||||||||| |||||||| ||||| |||||||| |||||||||||||| || |||| Sbjct: 310 gcgaatggcggcgagctcgtcagccccgccggctcatccaggtacctgctcagcagccgc 369 Query: 421 gccgtcgccgccgaggagatccaggaggtggaggc 455 |||| |||||||||||||||||||||||||||||| Sbjct: 370 gccgccgccgccgaggagatccaggaggtggaggc 404 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 186 bits (94), Expect = 1e-43 Identities = 127/138 (92%) Strand = Plus / Minus Query: 604 gtgacatcgttcagcatagactccgcggcgaagaaggtgacggtggtcggcgacgtgacg 663 |||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 34173307 gtgacatctttcaacatagacttcgcggcgaagaaggtgacggtggtcggcgacgtgacg 34173248 Query: 664 ccgctgggcgtcctcaacagcgtgtccaaggtgaagaacgcccagttctgggcgtcgcag 723 |||||||| || || ||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 34173247 ccgctgggggtgctgaacagcgtgtccaaggtgaagaacgcccagttctgggcggcgccg 34173188 Query: 724 ccggccatcgctgcctga 741 ||||| || || |||||| Sbjct: 34173187 ccggcgatagccgcctga 34173170 Score = 131 bits (66), Expect = 6e-27 Identities = 99/110 (90%) Strand = Plus / Minus Query: 168 catggctcctttgctcttcaaggacatgaaaagcctttcgtgctcatctccggcgtccac 227 |||||| |||||||| |||||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 34174669 catggcgcctttgctgttcaaggacatgaagagcctctcgtgctcgtcgccggcgtccac 34174610 Query: 228 tgcgatatgcccgagcctagagcggcagccgatggtccagtcacacaagg 277 ||||||||||||||| | ||||||||||||||||||| | ||||||||| Sbjct: 34174609 ggcgatatgcccgagcttggagcggcagccgatggtccggccacacaagg 34174560 Score = 117 bits (59), Expect = 9e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 361 gcgaatggcggtgagctcgttagcccggccggctcgtccaggtacctgctgagtggccgt 420 ||||||||||| |||||||| ||||| |||||||| |||||||||||||| || |||| Sbjct: 34174452 gcgaatggcggcgagctcgtcagccccgccggctcatccaggtacctgctcagcagccgc 34174393 Query: 421 gccgtcgccgccgaggagatccaggaggtggaggc 455 |||| |||||||||||||||||||||||||||||| Sbjct: 34174392 gccgccgccgccgaggagatccaggaggtggaggc 34174358 Score = 91.7 bits (46), Expect = 5e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 523 caggtagttgtactgaaggtctccctgcattgcaaagcatgcgaaggcaaagtgaagaag 582 ||||| |||||||||||||| || ||||| |||||||| |||| ||||||||||||||| Sbjct: 34173711 caggtggttgtactgaaggtatcactgcactgcaaagcgtgcgcgggcaaagtgaagaag 34173652 Query: 583 cacctctccaagatggcaggtg 604 |||||| ||||||||| ||||| Sbjct: 34173651 cacctcgccaagatggaaggtg 34173630 >gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 186 bits (94), Expect = 1e-43 Identities = 127/138 (92%) Strand = Plus / Minus Query: 604 gtgacatcgttcagcatagactccgcggcgaagaaggtgacggtggtcggcgacgtgacg 663 |||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 46647 gtgacatctttcaacatagacttcgcggcgaagaaggtgacggtggtcggcgacgtgacg 46588 Query: 664 ccgctgggcgtcctcaacagcgtgtccaaggtgaagaacgcccagttctgggcgtcgcag 723 |||||||| || || ||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 46587 ccgctgggggtgctgaacagcgtgtccaaggtgaagaacgcccagttctgggcggcgccg 46528 Query: 724 ccggccatcgctgcctga 741 ||||| || || |||||| Sbjct: 46527 ccggcgatagccgcctga 46510 Score = 131 bits (66), Expect = 6e-27 Identities = 99/110 (90%) Strand = Plus / Minus Query: 168 catggctcctttgctcttcaaggacatgaaaagcctttcgtgctcatctccggcgtccac 227 |||||| |||||||| |||||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 48009 catggcgcctttgctgttcaaggacatgaagagcctctcgtgctcgtcgccggcgtccac 47950 Query: 228 tgcgatatgcccgagcctagagcggcagccgatggtccagtcacacaagg 277 ||||||||||||||| | ||||||||||||||||||| | ||||||||| Sbjct: 47949 ggcgatatgcccgagcttggagcggcagccgatggtccggccacacaagg 47900 Score = 117 bits (59), Expect = 9e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 361 gcgaatggcggtgagctcgttagcccggccggctcgtccaggtacctgctgagtggccgt 420 ||||||||||| |||||||| ||||| |||||||| |||||||||||||| || |||| Sbjct: 47792 gcgaatggcggcgagctcgtcagccccgccggctcatccaggtacctgctcagcagccgc 47733 Query: 421 gccgtcgccgccgaggagatccaggaggtggaggc 455 |||| |||||||||||||||||||||||||||||| Sbjct: 47732 gccgccgccgccgaggagatccaggaggtggaggc 47698 Score = 91.7 bits (46), Expect = 5e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 523 caggtagttgtactgaaggtctccctgcattgcaaagcatgcgaaggcaaagtgaagaag 582 ||||| |||||||||||||| || ||||| |||||||| |||| ||||||||||||||| Sbjct: 47051 caggtggttgtactgaaggtatcactgcactgcaaagcgtgcgcgggcaaagtgaagaag 46992 Query: 583 cacctctccaagatggcaggtg 604 |||||| ||||||||| ||||| Sbjct: 46991 cacctcgccaagatggaaggtg 46970 >gb|AY109475.1| Zea mays CL21246_1 mRNA sequence Length = 1127 Score = 184 bits (93), Expect = 5e-43 Identities = 164/185 (88%), Gaps = 2/185 (1%) Strand = Plus / Minus Query: 523 caggtagttgtactgaaggtctccctgcattgcaaagcatgcgaaggcaaagtgaagaag 582 ||||| ||||| || ||||| |||||||| ||||||||||||| || || ||||||||| Sbjct: 700 caggtggttgtgctcaaggtatccctgcactgcaaagcatgcgccgggaa-gtgaagaag 642 Query: 583 cacctctccaag-atggcaggtgtgacatcgttcagcatagactccgcggcgaagaaggt 641 |||||||||||| |||| || ||||| ||||||| ||| |||| ||||||||||||||| Sbjct: 641 cacctctccaagcatggaagccgtgacgtcgttcaacatcgacttcgcggcgaagaaggt 582 Query: 642 gacggtggtcggcgacgtgacgccgctgggcgtcctcaacagcgtgtccaaggtgaagaa 701 ||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||| Sbjct: 581 cacggtggtcggcgacgtcacgccgctgggcgtgctcagcagcgtgtccaaggtgaagaa 522 Query: 702 cgccc 706 ||||| Sbjct: 521 cgccc 517 Score = 115 bits (58), Expect = 4e-22 Identities = 103/118 (87%) Strand = Plus / Minus Query: 167 ccatggctcctttgctcttcaaggacatgaaaagcctttcgtgctcatctccggcgtcca 226 ||||||||||| |||| |||| ||||||||| | || |||||||| || |||||||||| Sbjct: 1116 ccatggctcctctgctgttcagggacatgaaggggctgtcgtgctcgtccccggcgtcca 1057 Query: 227 ctgcgatatgcccgagcctagagcggcagccgatggtccagtcacacaaggtcattgc 284 | ||||||||||||||||| ||||||||||||||||||| | ||||||| | |||||| Sbjct: 1056 cggcgatatgcccgagcctggagcggcagccgatggtccggccacacaaagccattgc 999 Score = 81.8 bits (41), Expect = 5e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 376 ctcgttagcccggccggctcgtccaggtacctgctgagtggccgtgccgtcgccgccgag 435 ||||| |||||||| ||||||||| | ||| ||||||| ||||| || |||| ||||| Sbjct: 874 ctcgtcagcccggctggctcgtcccgctacttgctgagcggccgcttcgccgccaccgag 815 Query: 436 gagatccaggaggtggaggccgccccggccgttgatgtcaa 476 |||||||||||||||||| | ||||||||||| || ||||| Sbjct: 814 gagatccaggaggtggagtctgccccggccgtcgacgtcaa 774