BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst031k16 (1576 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AF050180.1|AF050180 Oryza sativa strain Indica IR58 KNOX clas... 670 0.0 ref|NM_001061081.1| Oryza sativa (japonica cultivar-group) Os05g... 662 0.0 dbj|AK111878.1| Oryza sativa (japonica cultivar-group) cDNA clon... 662 0.0 dbj|AB028885.1| Oryza sativa mRNA for knotted1-type homeobox pro... 662 0.0 dbj|AB007624.1| Oryza sativa (japonica cultivar-group) HOS9 mRNA... 662 0.0 >gb|AF050180.1|AF050180 Oryza sativa strain Indica IR58 KNOX class homeodomain protein (Oskn2) mRNA, complete cds Length = 1521 Score = 670 bits (338), Expect = 0.0 Identities = 553/622 (88%), Gaps = 2/622 (0%) Strand = Plus / Plus Query: 648 ggggagatcggcctggaccccgagctcgacgagttcatggaggcatattgccgggtgctg 707 ||||| || ||||| || || ||||||||||||||||||||| | || |||||||||||| Sbjct: 631 ggggaaattggcctcgatccggagctcgacgagttcatggagacgtactgccgggtgctg 690 Query: 708 gtgcggtacaaggaggagctatcgcggccgttcgacgaggcggcttccttcctcagcagc 767 | |||||||||||| || || |||||||||||||||||||||| |||||||||| | || Sbjct: 691 gagcggtacaaggaagaactcacgcggccgttcgacgaggcggcctccttcctcaccggc 750 Query: 768 atccagacgcagctcaccagcctctgcggtggcgcctccaccgcc-acctcgcactccga 826 ||||| || |||||| || |||||| || ||||| || ||||| ||| ||||||| Sbjct: 751 atccacacccagctcgcctccctctgtggcggcgcg-ccgccgcccaccgacaactccga 809 Query: 827 tgaaatggtggggtcttcggaggatgaaccatgctcaggggacgctgatgcgtctgactt 886 |||||||||||||||||| |||||||| || |||||||| ||||| ||||| | || || Sbjct: 810 tgaaatggtggggtcttcagaggatgagccgtgctcaggagacgccgatgcagcagattt 869 Query: 887 agggcaagagcacagctcccgcttggctgaccatgagctcaaggagatgttgctcaagaa 946 |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 870 tgggcaagaacacagctcccgcttggctgaccatgagctcaaagagatgttgctcaagaa 929 Query: 947 gtacagtggctgcttcagccgccttcgttccgagttcttgaagaagaggaagaaagggaa 1006 ||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 930 gtacagtggctgcctcagccgcctccggtccgagttcttgaagaagaggaagaaagggaa 989 Query: 1007 gctaccgaaggatgcacggtcagctctaatggactggtggaacacacactaccgctggcc 1066 |||||||| || || || || || || |||||||||||||||||||| ||||| ||||| Sbjct: 990 actaccgaaagacgcgcgatcggcacttatggactggtggaacacacattaccgttggcc 1049 Query: 1067 atatcctacggaagaggataaggtgaggctcgccgccatgacgggccttgacccgaagca 1126 || || ||||||||||||||||||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 1050 ttaccccacggaagaggataaggtgaggctggccgcgatgactggcctcgacccgaagca 1109 Query: 1127 gatcaacaactggttcatcaaccagaggaagaggcactggaagccatcggaggacatgcg 1186 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1110 gatcaacaactggttcatcaaccagaggaagaggcactggaagccatcggaggacatgcg 1169 Query: 1187 gttcgccctcatggagggtgtcaccggaggatcctcctccgggacgacactgtacttcga 1246 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1170 gttcgcgctcatggagggggtcaccggaggatcctcctccgggacgacactgtacttcga 1229 Query: 1247 cacgggcacgatcggaccatga 1268 ||| ||||| || || |||||| Sbjct: 1230 caccggcacaattggtccatga 1251 Score = 244 bits (123), Expect = 9e-61 Identities = 150/159 (94%) Strand = Plus / Plus Query: 487 cggcggatctgacggagctgatgaaggcgcagatcgccggccacccccgctacccctccc 546 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 458 cggcggatctgacggagctgatgaaggcgcagatcgccggccacccgagctacccttccc 517 Query: 547 tcctctccgcctacatcgaatgccgcaaggtgggtgcgccgccggaggtggccacgctgc 606 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 518 tcctctccgcctacatcgaatgccgcaaggttggtgcgccgccggaggtgaccacgctgc 577 Query: 607 tggaggagatcggccgggagaggtgcggccgcggcggcg 645 |||||||||| ||||||||| || ||||| ||||||||| Sbjct: 578 tggaggagataggccgggaggggcgcggcggcggcggcg 616 >ref|NM_001061081.1| Oryza sativa (japonica cultivar-group) Os05g0129700 (Os05g0129700) mRNA, complete cds Length = 1784 Score = 662 bits (334), Expect = 0.0 Identities = 552/622 (88%), Gaps = 2/622 (0%) Strand = Plus / Plus Query: 648 ggggagatcggcctggaccccgagctcgacgagttcatggaggcatattgccgggtgctg 707 ||||| || ||||| || || ||||||||||||||||||||| | || |||||||||||| Sbjct: 815 ggggaaattggcctcgatccggagctcgacgagttcatggagacgtactgccgggtgctg 874 Query: 708 gtgcggtacaaggaggagctatcgcggccgttcgacgaggcggcttccttcctcagcagc 767 | |||||||||||| || || | |||||||||||||||||||| |||||||||| | || Sbjct: 875 gagcggtacaaggaagaactcacacggccgttcgacgaggcggcctccttcctcaccggc 934 Query: 768 atccagacgcagctcaccagcctctgcggtggcgcctccaccgcc-acctcgcactccga 826 ||||| || |||||| || |||||| || ||||| || ||||| ||| ||||||| Sbjct: 935 atccacacccagctcgcctccctctgtggcggcgcg-ccgccgcccaccgacaactccga 993 Query: 827 tgaaatggtggggtcttcggaggatgaaccatgctcaggggacgctgatgcgtctgactt 886 |||||||||||||||||| |||||||| || |||||||| ||||| ||||| | || || Sbjct: 994 tgaaatggtggggtcttcagaggatgagccgtgctcaggagacgccgatgcagcagattt 1053 Query: 887 agggcaagagcacagctcccgcttggctgaccatgagctcaaggagatgttgctcaagaa 946 |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1054 tgggcaagaacacagctcccgcttggctgaccatgagctcaaagagatgttgctcaagaa 1113 Query: 947 gtacagtggctgcttcagccgccttcgttccgagttcttgaagaagaggaagaaagggaa 1006 ||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 1114 gtacagtggctgcctcagccgcctccggtccgagttcttgaagaagaggaagaaagggaa 1173 Query: 1007 gctaccgaaggatgcacggtcagctctaatggactggtggaacacacactaccgctggcc 1066 |||||||| || || || || || || |||||||||||||||||||| ||||| ||||| Sbjct: 1174 actaccgaaagacgcgcgatcggcacttatggactggtggaacacacattaccgttggcc 1233 Query: 1067 atatcctacggaagaggataaggtgaggctcgccgccatgacgggccttgacccgaagca 1126 || || ||||||||||||||||||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 1234 ttaccccacggaagaggataaggtgaggctggccgcgatgactggcctcgacccgaagca 1293 Query: 1127 gatcaacaactggttcatcaaccagaggaagaggcactggaagccatcggaggacatgcg 1186 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1294 gatcaacaactggttcatcaaccagaggaagaggcactggaagccatcggaggacatgcg 1353 Query: 1187 gttcgccctcatggagggtgtcaccggaggatcctcctccgggacgacactgtacttcga 1246 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1354 gttcgcgctcatggagggggtcaccggaggatcctcctccgggacgacactgtacttcga 1413 Query: 1247 cacgggcacgatcggaccatga 1268 ||| ||||| || || |||||| Sbjct: 1414 caccggcacaattggtccatga 1435 Score = 252 bits (127), Expect = 4e-63 Identities = 151/159 (94%) Strand = Plus / Plus Query: 487 cggcggatctgacggagctgatgaaggcgcagatcgccggccacccccgctacccctccc 546 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 642 cggcggatctgacggagctgatgaaggcgcagatcgccggccacccgagctacccttccc 701 Query: 547 tcctctccgcctacatcgaatgccgcaaggtgggtgcgccgccggaggtggccacgctgc 606 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 702 tcctctccgcctacatcgaatgccgcaaggttggtgcgccgccggaggtgaccacgctgc 761 Query: 607 tggaggagatcggccgggagaggtgcggccgcggcggcg 645 |||||||||||||||||||| || ||||| ||||||||| Sbjct: 762 tggaggagatcggccgggaggggcgcggcggcggcggcg 800 >dbj|AK111878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046I12, full insert sequence Length = 1785 Score = 662 bits (334), Expect = 0.0 Identities = 552/622 (88%), Gaps = 2/622 (0%) Strand = Plus / Plus Query: 648 ggggagatcggcctggaccccgagctcgacgagttcatggaggcatattgccgggtgctg 707 ||||| || ||||| || || ||||||||||||||||||||| | || |||||||||||| Sbjct: 816 ggggaaattggcctcgatccggagctcgacgagttcatggagacgtactgccgggtgctg 875 Query: 708 gtgcggtacaaggaggagctatcgcggccgttcgacgaggcggcttccttcctcagcagc 767 | |||||||||||| || || | |||||||||||||||||||| |||||||||| | || Sbjct: 876 gagcggtacaaggaagaactcacacggccgttcgacgaggcggcctccttcctcaccggc 935 Query: 768 atccagacgcagctcaccagcctctgcggtggcgcctccaccgcc-acctcgcactccga 826 ||||| || |||||| || |||||| || ||||| || ||||| ||| ||||||| Sbjct: 936 atccacacccagctcgcctccctctgtggcggcgcg-ccgccgcccaccgacaactccga 994 Query: 827 tgaaatggtggggtcttcggaggatgaaccatgctcaggggacgctgatgcgtctgactt 886 |||||||||||||||||| |||||||| || |||||||| ||||| ||||| | || || Sbjct: 995 tgaaatggtggggtcttcagaggatgagccgtgctcaggagacgccgatgcagcagattt 1054 Query: 887 agggcaagagcacagctcccgcttggctgaccatgagctcaaggagatgttgctcaagaa 946 |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1055 tgggcaagaacacagctcccgcttggctgaccatgagctcaaagagatgttgctcaagaa 1114 Query: 947 gtacagtggctgcttcagccgccttcgttccgagttcttgaagaagaggaagaaagggaa 1006 ||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 1115 gtacagtggctgcctcagccgcctccggtccgagttcttgaagaagaggaagaaagggaa 1174 Query: 1007 gctaccgaaggatgcacggtcagctctaatggactggtggaacacacactaccgctggcc 1066 |||||||| || || || || || || |||||||||||||||||||| ||||| ||||| Sbjct: 1175 actaccgaaagacgcgcgatcggcacttatggactggtggaacacacattaccgttggcc 1234 Query: 1067 atatcctacggaagaggataaggtgaggctcgccgccatgacgggccttgacccgaagca 1126 || || ||||||||||||||||||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 1235 ttaccccacggaagaggataaggtgaggctggccgcgatgactggcctcgacccgaagca 1294 Query: 1127 gatcaacaactggttcatcaaccagaggaagaggcactggaagccatcggaggacatgcg 1186 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1295 gatcaacaactggttcatcaaccagaggaagaggcactggaagccatcggaggacatgcg 1354 Query: 1187 gttcgccctcatggagggtgtcaccggaggatcctcctccgggacgacactgtacttcga 1246 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1355 gttcgcgctcatggagggggtcaccggaggatcctcctccgggacgacactgtacttcga 1414 Query: 1247 cacgggcacgatcggaccatga 1268 ||| ||||| || || |||||| Sbjct: 1415 caccggcacaattggtccatga 1436 Score = 252 bits (127), Expect = 4e-63 Identities = 151/159 (94%) Strand = Plus / Plus Query: 487 cggcggatctgacggagctgatgaaggcgcagatcgccggccacccccgctacccctccc 546 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 643 cggcggatctgacggagctgatgaaggcgcagatcgccggccacccgagctacccttccc 702 Query: 547 tcctctccgcctacatcgaatgccgcaaggtgggtgcgccgccggaggtggccacgctgc 606 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 703 tcctctccgcctacatcgaatgccgcaaggttggtgcgccgccggaggtgaccacgctgc 762 Query: 607 tggaggagatcggccgggagaggtgcggccgcggcggcg 645 |||||||||||||||||||| || ||||| ||||||||| Sbjct: 763 tggaggagatcggccgggaggggcgcggcggcggcggcg 801 >dbj|AB028885.1| Oryza sativa mRNA for knotted1-type homeobox protein OSH71, complete cds Length = 1576 Score = 662 bits (334), Expect = 0.0 Identities = 552/622 (88%), Gaps = 2/622 (0%) Strand = Plus / Plus Query: 648 ggggagatcggcctggaccccgagctcgacgagttcatggaggcatattgccgggtgctg 707 ||||| || ||||| || || ||||||||||||||||||||| | || |||||||||||| Sbjct: 611 ggggaaattggcctcgatccggagctcgacgagttcatggagacgtactgccgggtgctg 670 Query: 708 gtgcggtacaaggaggagctatcgcggccgttcgacgaggcggcttccttcctcagcagc 767 | |||||||||||| || || | |||||||||||||||||||| |||||||||| | || Sbjct: 671 gagcggtacaaggaagaactcacacggccgttcgacgaggcggcctccttcctcaccggc 730 Query: 768 atccagacgcagctcaccagcctctgcggtggcgcctccaccgcc-acctcgcactccga 826 ||||| || |||||| || |||||| || ||||| || ||||| ||| ||||||| Sbjct: 731 atccacacccagctcgcctccctctgtggcggcgcg-ccgccgcccaccgacaactccga 789 Query: 827 tgaaatggtggggtcttcggaggatgaaccatgctcaggggacgctgatgcgtctgactt 886 |||||||||||||||||| |||||||| || |||||||| ||||| ||||| | || || Sbjct: 790 tgaaatggtggggtcttcagaggatgagccgtgctcaggagacgccgatgcagcagattt 849 Query: 887 agggcaagagcacagctcccgcttggctgaccatgagctcaaggagatgttgctcaagaa 946 |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 850 tgggcaagaacacagctcccgcttggctgaccatgagctcaaagagatgttgctcaagaa 909 Query: 947 gtacagtggctgcttcagccgccttcgttccgagttcttgaagaagaggaagaaagggaa 1006 ||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 910 gtacagtggctgcctcagccgcctccggtccgagttcttgaagaagaggaagaaagggaa 969 Query: 1007 gctaccgaaggatgcacggtcagctctaatggactggtggaacacacactaccgctggcc 1066 |||||||| || || || || || || |||||||||||||||||||| ||||| ||||| Sbjct: 970 actaccgaaagacgcgcgatcggcacttatggactggtggaacacacattaccgttggcc 1029 Query: 1067 atatcctacggaagaggataaggtgaggctcgccgccatgacgggccttgacccgaagca 1126 || || ||||||||||||||||||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 1030 ttaccccacggaagaggataaggtgaggctggccgcgatgactggcctcgacccgaagca 1089 Query: 1127 gatcaacaactggttcatcaaccagaggaagaggcactggaagccatcggaggacatgcg 1186 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1090 gatcaacaactggttcatcaaccagaggaagaggcactggaagccatcggaggacatgcg 1149 Query: 1187 gttcgccctcatggagggtgtcaccggaggatcctcctccgggacgacactgtacttcga 1246 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1150 gttcgcgctcatggagggggtcaccggaggatcctcctccgggacgacactgtacttcga 1209 Query: 1247 cacgggcacgatcggaccatga 1268 ||| ||||| || || |||||| Sbjct: 1210 caccggcacaattggtccatga 1231 Score = 252 bits (127), Expect = 4e-63 Identities = 151/159 (94%) Strand = Plus / Plus Query: 487 cggcggatctgacggagctgatgaaggcgcagatcgccggccacccccgctacccctccc 546 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 438 cggcggatctgacggagctgatgaaggcgcagatcgccggccacccgagctacccttccc 497 Query: 547 tcctctccgcctacatcgaatgccgcaaggtgggtgcgccgccggaggtggccacgctgc 606 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 498 tcctctccgcctacatcgaatgccgcaaggttggtgcgccgccggaggtgaccacgctgc 557 Query: 607 tggaggagatcggccgggagaggtgcggccgcggcggcg 645 |||||||||||||||||||| || ||||| ||||||||| Sbjct: 558 tggaggagatcggccgggaggggcgcggcggcggcggcg 596 >dbj|AB007624.1| Oryza sativa (japonica cultivar-group) HOS9 mRNA, partial cds Length = 1346 Score = 662 bits (334), Expect = 0.0 Identities = 552/622 (88%), Gaps = 2/622 (0%) Strand = Plus / Plus Query: 648 ggggagatcggcctggaccccgagctcgacgagttcatggaggcatattgccgggtgctg 707 ||||| || ||||| || || ||||||||||||||||||||| | || |||||||||||| Sbjct: 377 ggggaaattggcctcgatccggagctcgacgagttcatggagacgtactgccgggtgctg 436 Query: 708 gtgcggtacaaggaggagctatcgcggccgttcgacgaggcggcttccttcctcagcagc 767 | |||||||||||| || || | |||||||||||||||||||| |||||||||| | || Sbjct: 437 gagcggtacaaggaagaactcacacggccgttcgacgaggcggcctccttcctcaccggc 496 Query: 768 atccagacgcagctcaccagcctctgcggtggcgcctccaccgcc-acctcgcactccga 826 ||||| || |||||| || |||||| || ||||| || ||||| ||| ||||||| Sbjct: 497 atccacacccagctcgcctccctctgtggcggcgcg-ccgccgcccaccgacaactccga 555 Query: 827 tgaaatggtggggtcttcggaggatgaaccatgctcaggggacgctgatgcgtctgactt 886 |||||||||||||||||| |||||||| || |||||||| ||||| ||||| | || || Sbjct: 556 tgaaatggtggggtcttcagaggatgagccgtgctcaggagacgccgatgcagcagattt 615 Query: 887 agggcaagagcacagctcccgcttggctgaccatgagctcaaggagatgttgctcaagaa 946 |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 616 tgggcaagaacacagctcccgcttggctgaccatgagctcaaagagatgttgctcaagaa 675 Query: 947 gtacagtggctgcttcagccgccttcgttccgagttcttgaagaagaggaagaaagggaa 1006 ||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 676 gtacagtggctgcctcagccgcctccggtccgagttcttgaagaagaggaagaaagggaa 735 Query: 1007 gctaccgaaggatgcacggtcagctctaatggactggtggaacacacactaccgctggcc 1066 |||||||| || || || || || || |||||||||||||||||||| ||||| ||||| Sbjct: 736 actaccgaaagacgcgcgatcggcacttatggactggtggaacacacattaccgttggcc 795 Query: 1067 atatcctacggaagaggataaggtgaggctcgccgccatgacgggccttgacccgaagca 1126 || || ||||||||||||||||||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 796 ttaccccacggaagaggataaggtgaggctggccgcgatgactggcctcgacccgaagca 855 Query: 1127 gatcaacaactggttcatcaaccagaggaagaggcactggaagccatcggaggacatgcg 1186 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 856 gatcaacaactggttcatcaaccagaggaagaggcactggaagccatcggaggacatgcg 915 Query: 1187 gttcgccctcatggagggtgtcaccggaggatcctcctccgggacgacactgtacttcga 1246 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 916 gttcgcgctcatggagggggtcaccggaggatcctcctccgggacgacactgtacttcga 975 Query: 1247 cacgggcacgatcggaccatga 1268 ||| ||||| || || |||||| Sbjct: 976 caccggcacaattggtccatga 997 Score = 252 bits (127), Expect = 4e-63 Identities = 151/159 (94%) Strand = Plus / Plus Query: 487 cggcggatctgacggagctgatgaaggcgcagatcgccggccacccccgctacccctccc 546 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 204 cggcggatctgacggagctgatgaaggcgcagatcgccggccacccgagctacccttccc 263 Query: 547 tcctctccgcctacatcgaatgccgcaaggtgggtgcgccgccggaggtggccacgctgc 606 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 264 tcctctccgcctacatcgaatgccgcaaggttggtgcgccgccggaggtgaccacgctgc 323 Query: 607 tggaggagatcggccgggagaggtgcggccgcggcggcg 645 |||||||||||||||||||| || ||||| ||||||||| Sbjct: 324 tggaggagatcggccgggaggggcgcggcggcggcggcg 362