BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst031f18 (987 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001056440.1| Oryza sativa (japonica cultivar-group) Os03g... 161 7e-36 dbj|AK070495.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 7e-36 gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare str... 141 6e-30 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 141 6e-30 gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare str... 141 6e-30 >ref|NM_001056440.1| Oryza sativa (japonica cultivar-group) Os03g0308600 (Os03g0308600) mRNA, complete cds Length = 959 Score = 161 bits (81), Expect = 7e-36 Identities = 120/133 (90%) Strand = Plus / Plus Query: 238 cagatcgtcttcatgcacggcttcaccaagttccaccgccacaacaagccggtgatcgtg 297 |||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||| Sbjct: 196 cagatcgtcttcatgcacgggttcatcaagttccaccgccagaacaagccggtgatcgtg 255 Query: 298 gaggcgctcaattcgctccacctcatgcgcccgcgccgctccaccgtcagcatcaacgcc 357 || |||||||| | || ||||||||||||||||||||||||||||| |||||||||| Sbjct: 256 gacgcgctcaacaagttcgacctcatgcgcccgcgccgctccaccgtcggcatcaacgcg 315 Query: 358 gtcgcgcccccgc 370 | |||||| |||| Sbjct: 316 gccgcgccaccgc 328 Score = 137 bits (69), Expect = 1e-28 Identities = 102/113 (90%) Strand = Plus / Plus Query: 58 cggcgatgacgaagttgccggtggacatgcggccacggctgacgctggaggactacatcc 117 |||||||| ||||| ||||| ||||| ||| || |||||||| || ||||||||||||| Sbjct: 86 cggcgatgccgaagctgccgatggaccagcgaccgcggctgactctcgaggactacatcc 145 Query: 118 tcttcttcaccacccgcaccggccacggcctcaccagggaccacctcaaccag 170 ||||||||||||||||| |||||||||||||||||| |||||||||||||||| Sbjct: 146 tcttcttcaccacccgctccggccacggcctcaccatggaccacctcaaccag 198 Score = 95.6 bits (48), Expect = 3e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 636 gaagggccaggggaaggcggccatgaggaggaggaagaagcgcatggtggagctgctcac 695 |||||||||||||||||||||||||||| |||||||| |||| | ||| || ||||||| Sbjct: 594 gaagggccaggggaaggcggccatgagggggaggaagcggcgcgtcgtgcagttgctcac 653 Query: 696 gctcccgtccctcgagaacatggc 719 |||||||||| |||||||| |||| Sbjct: 654 gctcccgtccgtcgagaacttggc 677 Score = 85.7 bits (43), Expect = 3e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 429 cgacatcgaggacctcgactggtgcgagtgccccgtcagctccatcctctccgtccgcgc 488 ||||||||||||||||| |||| |||||||||||||| ||||| |||||||| ||||||| Sbjct: 381 cgacatcgaggacctcggctggcgcgagtgccccgtcggctccctcctctccatccgcgc 440 Query: 489 cgg 491 ||| Sbjct: 441 cgg 443 Score = 79.8 bits (40), Expect = 2e-11 Identities = 46/48 (95%) Strand = Plus / Plus Query: 544 gccgtggagcgcgtctccccgccgagcatactgagcgcctcctcgccc 591 |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 508 gccgtggagcgcgtctccccgccgagcatactcagcgcctgctcgccc 555 >dbj|AK070495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052A01, full insert sequence Length = 962 Score = 161 bits (81), Expect = 7e-36 Identities = 120/133 (90%) Strand = Plus / Plus Query: 238 cagatcgtcttcatgcacggcttcaccaagttccaccgccacaacaagccggtgatcgtg 297 |||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||| Sbjct: 197 cagatcgtcttcatgcacgggttcatcaagttccaccgccagaacaagccggtgatcgtg 256 Query: 298 gaggcgctcaattcgctccacctcatgcgcccgcgccgctccaccgtcagcatcaacgcc 357 || |||||||| | || ||||||||||||||||||||||||||||| |||||||||| Sbjct: 257 gacgcgctcaacaagttcgacctcatgcgcccgcgccgctccaccgtcggcatcaacgcg 316 Query: 358 gtcgcgcccccgc 370 | |||||| |||| Sbjct: 317 gccgcgccaccgc 329 Score = 137 bits (69), Expect = 1e-28 Identities = 102/113 (90%) Strand = Plus / Plus Query: 58 cggcgatgacgaagttgccggtggacatgcggccacggctgacgctggaggactacatcc 117 |||||||| ||||| ||||| ||||| ||| || |||||||| || ||||||||||||| Sbjct: 87 cggcgatgccgaagctgccgatggaccagcgaccgcggctgactctcgaggactacatcc 146 Query: 118 tcttcttcaccacccgcaccggccacggcctcaccagggaccacctcaaccag 170 ||||||||||||||||| |||||||||||||||||| |||||||||||||||| Sbjct: 147 tcttcttcaccacccgctccggccacggcctcaccatggaccacctcaaccag 199 Score = 95.6 bits (48), Expect = 3e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 636 gaagggccaggggaaggcggccatgaggaggaggaagaagcgcatggtggagctgctcac 695 |||||||||||||||||||||||||||| |||||||| |||| | ||| || ||||||| Sbjct: 595 gaagggccaggggaaggcggccatgagggggaggaagcggcgcgtcgtgcagttgctcac 654 Query: 696 gctcccgtccctcgagaacatggc 719 |||||||||| |||||||| |||| Sbjct: 655 gctcccgtccgtcgagaacttggc 678 Score = 85.7 bits (43), Expect = 3e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 429 cgacatcgaggacctcgactggtgcgagtgccccgtcagctccatcctctccgtccgcgc 488 ||||||||||||||||| |||| |||||||||||||| ||||| |||||||| ||||||| Sbjct: 382 cgacatcgaggacctcggctggcgcgagtgccccgtcggctccctcctctccatccgcgc 441 Query: 489 cgg 491 ||| Sbjct: 442 cgg 444 Score = 79.8 bits (40), Expect = 2e-11 Identities = 46/48 (95%) Strand = Plus / Plus Query: 544 gccgtggagcgcgtctccccgccgagcatactgagcgcctcctcgccc 591 |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 509 gccgtggagcgcgtctccccgccgagcatactcagcgcctgctcgccc 556 >gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05, from chromosome 3, complete sequence Length = 127348 Score = 141 bits (71), Expect = 6e-30 Identities = 104/115 (90%) Strand = Plus / Minus Query: 58 cggcgatgacgaagttgccggtggacatgcggccacggctgacgctggaggactacatcc 117 |||||||| ||||| ||||| ||||| ||| || |||||||| || ||||||||||||| Sbjct: 20107 cggcgatgccgaagctgccgatggaccagcgaccgcggctgactctcgaggactacatcc 20048 Query: 118 tcttcttcaccacccgcaccggccacggcctcaccagggaccacctcaaccaggt 172 ||||||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 20047 tcttcttcaccacccgctccggccacggcctcaccatggaccacctcaaccaggt 19993 Score = 95.6 bits (48), Expect = 3e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 636 gaagggccaggggaaggcggccatgaggaggaggaagaagcgcatggtggagctgctcac 695 |||||||||||||||||||||||||||| |||||||| |||| | ||| || ||||||| Sbjct: 19419 gaagggccaggggaaggcggccatgagggggaggaagcggcgcgtcgtgcagttgctcac 19360 Query: 696 gctcccgtccctcgagaacatggc 719 |||||||||| |||||||| |||| Sbjct: 19359 gctcccgtccgtcgagaacttggc 19336 Score = 93.7 bits (47), Expect = 1e-15 Identities = 77/87 (88%) Strand = Plus / Minus Query: 284 agccggtgatcgtggaggcgctcaattcgctccacctcatgcgcccgcgccgctccaccg 343 |||||||||||||||| |||||||| | || ||||||||||||||||||||||||||| Sbjct: 19771 agccggtgatcgtggacgcgctcaacaagttcgacctcatgcgcccgcgccgctccaccg 19712 Query: 344 tcagcatcaacgccgtcgcgcccccgc 370 || |||||||||| | |||||| |||| Sbjct: 19711 tcggcatcaacgcggccgcgccaccgc 19685 Score = 85.7 bits (43), Expect = 3e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 429 cgacatcgaggacctcgactggtgcgagtgccccgtcagctccatcctctccgtccgcgc 488 ||||||||||||||||| |||| |||||||||||||| ||||| |||||||| ||||||| Sbjct: 19632 cgacatcgaggacctcggctggcgcgagtgccccgtcggctccctcctctccatccgcgc 19573 Query: 489 cgg 491 ||| Sbjct: 19572 cgg 19570 Score = 79.8 bits (40), Expect = 2e-11 Identities = 46/48 (95%) Strand = Plus / Minus Query: 544 gccgtggagcgcgtctccccgccgagcatactgagcgcctcctcgccc 591 |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 19505 gccgtggagcgcgtctccccgccgagcatactcagcgcctgctcgccc 19458 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 141 bits (71), Expect = 6e-30 Identities = 104/115 (90%) Strand = Plus / Plus Query: 58 cggcgatgacgaagttgccggtggacatgcggccacggctgacgctggaggactacatcc 117 |||||||| ||||| ||||| ||||| ||| || |||||||| || ||||||||||||| Sbjct: 10959023 cggcgatgccgaagctgccgatggaccagcgaccgcggctgactctcgaggactacatcc 10959082 Query: 118 tcttcttcaccacccgcaccggccacggcctcaccagggaccacctcaaccaggt 172 ||||||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 10959083 tcttcttcaccacccgctccggccacggcctcaccatggaccacctcaaccaggt 10959137 Score = 95.6 bits (48), Expect = 3e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 636 gaagggccaggggaaggcggccatgaggaggaggaagaagcgcatggtggagctgctcac 695 |||||||||||||||||||||||||||| |||||||| |||| | ||| || ||||||| Sbjct: 10959711 gaagggccaggggaaggcggccatgagggggaggaagcggcgcgtcgtgcagttgctcac 10959770 Query: 696 gctcccgtccctcgagaacatggc 719 |||||||||| |||||||| |||| Sbjct: 10959771 gctcccgtccgtcgagaacttggc 10959794 Score = 93.7 bits (47), Expect = 1e-15 Identities = 77/87 (88%) Strand = Plus / Plus Query: 284 agccggtgatcgtggaggcgctcaattcgctccacctcatgcgcccgcgccgctccaccg 343 |||||||||||||||| |||||||| | || ||||||||||||||||||||||||||| Sbjct: 10959359 agccggtgatcgtggacgcgctcaacaagttcgacctcatgcgcccgcgccgctccaccg 10959418 Query: 344 tcagcatcaacgccgtcgcgcccccgc 370 || |||||||||| | |||||| |||| Sbjct: 10959419 tcggcatcaacgcggccgcgccaccgc 10959445 Score = 85.7 bits (43), Expect = 3e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 429 cgacatcgaggacctcgactggtgcgagtgccccgtcagctccatcctctccgtccgcgc 488 ||||||||||||||||| |||| |||||||||||||| ||||| |||||||| ||||||| Sbjct: 10959498 cgacatcgaggacctcggctggcgcgagtgccccgtcggctccctcctctccatccgcgc 10959557 Query: 489 cgg 491 ||| Sbjct: 10959558 cgg 10959560 Score = 79.8 bits (40), Expect = 2e-11 Identities = 46/48 (95%) Strand = Plus / Plus Query: 544 gccgtggagcgcgtctccccgccgagcatactgagcgcctcctcgccc 591 |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 10959625 gccgtggagcgcgtctccccgccgagcatactcagcgcctgctcgccc 10959672 >gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042B10, from chromosome 3, complete sequence Length = 144205 Score = 141 bits (71), Expect = 6e-30 Identities = 104/115 (90%) Strand = Plus / Plus Query: 58 cggcgatgacgaagttgccggtggacatgcggccacggctgacgctggaggactacatcc 117 |||||||| ||||| ||||| ||||| ||| || |||||||| || ||||||||||||| Sbjct: 5745 cggcgatgccgaagctgccgatggaccagcgaccgcggctgactctcgaggactacatcc 5804 Query: 118 tcttcttcaccacccgcaccggccacggcctcaccagggaccacctcaaccaggt 172 ||||||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 5805 tcttcttcaccacccgctccggccacggcctcaccatggaccacctcaaccaggt 5859 Score = 95.6 bits (48), Expect = 3e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 636 gaagggccaggggaaggcggccatgaggaggaggaagaagcgcatggtggagctgctcac 695 |||||||||||||||||||||||||||| |||||||| |||| | ||| || ||||||| Sbjct: 6433 gaagggccaggggaaggcggccatgagggggaggaagcggcgcgtcgtgcagttgctcac 6492 Query: 696 gctcccgtccctcgagaacatggc 719 |||||||||| |||||||| |||| Sbjct: 6493 gctcccgtccgtcgagaacttggc 6516 Score = 93.7 bits (47), Expect = 1e-15 Identities = 77/87 (88%) Strand = Plus / Plus Query: 284 agccggtgatcgtggaggcgctcaattcgctccacctcatgcgcccgcgccgctccaccg 343 |||||||||||||||| |||||||| | || ||||||||||||||||||||||||||| Sbjct: 6081 agccggtgatcgtggacgcgctcaacaagttcgacctcatgcgcccgcgccgctccaccg 6140 Query: 344 tcagcatcaacgccgtcgcgcccccgc 370 || |||||||||| | |||||| |||| Sbjct: 6141 tcggcatcaacgcggccgcgccaccgc 6167 Score = 85.7 bits (43), Expect = 3e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 429 cgacatcgaggacctcgactggtgcgagtgccccgtcagctccatcctctccgtccgcgc 488 ||||||||||||||||| |||| |||||||||||||| ||||| |||||||| ||||||| Sbjct: 6220 cgacatcgaggacctcggctggcgcgagtgccccgtcggctccctcctctccatccgcgc 6279 Query: 489 cgg 491 ||| Sbjct: 6280 cgg 6282 Score = 79.8 bits (40), Expect = 2e-11 Identities = 46/48 (95%) Strand = Plus / Plus Query: 544 gccgtggagcgcgtctccccgccgagcatactgagcgcctcctcgccc 591 |||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 6347 gccgtggagcgcgtctccccgccgagcatactcagcgcctgctcgccc 6394