BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst031f04 (1206 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001048536.1| Oryza sativa (japonica cultivar-group) Os01g... 1045 0.0 dbj|AK101834.1| Oryza sativa (japonica cultivar-group) cDNA clon... 1045 0.0 gb|AY103885.1| Zea mays PCO145718 mRNA sequence 797 0.0 dbj|AK242046.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 541 e-150 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 470 e-129 >ref|NM_001048536.1| Oryza sativa (japonica cultivar-group) Os01g0144000 (Os01g0144000) mRNA, complete cds Length = 1398 Score = 1045 bits (527), Expect = 0.0 Identities = 825/919 (89%), Gaps = 4/919 (0%) Strand = Plus / Plus Query: 196 ggagaggatgtcgaggaggtcggtgaatccgggccggcgggtggcggacggggccctgcc 255 |||| |||||||||||||||||||||||||| |||||||||||||||| |||| |||| Sbjct: 232 ggagtggatgtcgaggaggtcggtgaatccgagccggcgggtggcggatgggggattgcc 291 Query: 256 gtccgtcggcggcctgctccaccccaagtcccgctcgccgcccgtgctcaccattgccct 315 ||| ||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 292 gtctgtcggtggcctgcttcaccccaagtcacgctcgccgcccgtgctcaccatcgccct 351 Query: 316 cgtggtcctgggtgtcattgttctgatcgcctacttcaacagcggctcaggtgtaactgt 375 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || Sbjct: 352 cgtggtcctgggtgtcattattctgatcgcctacttcaatagcggctcaggtgtaacagt 411 Query: 376 tacaagcagagaagctttaagcaggtctgaaggttcttgcacatcagaagtcatccaggc 435 ||| |||||||||||| | |||||||||||||||||||| ||| |||||||||| || || Sbjct: 412 tactagcagagaagctgtgagcaggtctgaaggttcttgtacaccagaagtcatgcaagc 471 Query: 436 gcttccttatcttaaaaaggcttatggcaaggagatgcaaaaggttctccatgtcggccc 495 |||||||||||||||||||| |||||||| ||| |||| |||||||||||||| ||||| Sbjct: 472 acttccttatcttaaaaaggcatatggcaatgagttgcataaggttctccatgttggccc 531 Query: 496 cgatagttgcacaatagtttctaacttgttgaaagaagggaaggttgaagcatggggagt 555 |||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 532 tgatagttgtacagtagtttctaacttgttgaaggaagggaaggttgaagcatggggagt 591 Query: 556 ggagccttatgatttggaggatgctgatagtagctgcaaaagccttgtgcgcaagggctt 615 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 592 ggagccttatgatttggaggatactgatagtagctgcaaaagccttgtgcgcaagggctt 651 Query: 616 tgtccgtatggctgacattaagttccctcttccatatcgcccacattcatttaaccttgt 675 ||| ||||||||||| || ||||||||||||||||| |||| | |||| ||||||||||| Sbjct: 652 tgttcgtatggctgatatcaagttccctcttccataccgccaagattcctttaaccttgt 711 Query: 676 tgtcgtgtcagatgctttaggttatctgaccccaaagtatctgaacaaaacactgcctga 735 | |||| ||||||||||| | |||| ||||||||| ||||||||||||||||| || || Sbjct: 712 tatcgtatcagatgctttggattatttgaccccaagatatctgaacaaaacacttccaga 771 Query: 736 tttagcaaggatttccacatatggtcttgttatctttgctggcaatccaggtcagcagaa 795 ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||| ||||| Sbjct: 772 tttagcaaggatttctacagatggtcttgttatctttgccggcaatccaggtcaacagaa 831 Query: 796 agctaaggtttctgaactaccaaaatttggaagaccagcaaagttgcggagttcttcatg 855 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| || Sbjct: 832 ggctaaggtttctgaactaccaaaattcggaagaccggcaaagttgcggagttcttcgtg 891 Query: 856 gtggactcgctactttatccagactggcttgaccgagaatgaaggaccattgaagaagtt 915 |||| | || |||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 892 gtggtcgcgatactttatccagactggcttgagagagaatgaagggccattgaagaagtt 951 Query: 916 tgagcaggctgccaaaaagaacaaatacaaaccagactgtcagatcttccaccttagttc 975 |||||||||||| |||||||||||||||||||||||||| |||||||| ||||| || Sbjct: 952 tgagcaggctgcttccaagaacaaatacaaaccagactgtcaaatcttccatcttagctc 1011 Query: 976 gtaggcttgtactgatcagggtgatgtctatccatgacaccttggatcattgcccccacc 1035 |||||| ||| |||||| |||||||| ||||||||| ||| |||||| ||| || | || Sbjct: 1012 gtaggcgtgttctgatctaggtgatgtgtatccatgaaacc-tggatcgttg-cctcgcc 1069 Query: 1036 ggttttgtaaacaatatctttgcgtatgccccgttgacttgctctccttttatgcggagg 1095 |||||||||| ||||||| || || |||||||||||||| || |||||| |||||| Sbjct: 1070 ggttttgtaagcaatatc-ctgttta-cccccgttgacttgcgcttcttttacacggagg 1127 Query: 1096 aactgtcacacaaagagcc 1114 || ||||||| ||||||| Sbjct: 1128 aattgtcacattaagagcc 1146 >dbj|AK101834.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069B21, full insert sequence Length = 1400 Score = 1045 bits (527), Expect = 0.0 Identities = 825/919 (89%), Gaps = 4/919 (0%) Strand = Plus / Plus Query: 196 ggagaggatgtcgaggaggtcggtgaatccgggccggcgggtggcggacggggccctgcc 255 |||| |||||||||||||||||||||||||| |||||||||||||||| |||| |||| Sbjct: 234 ggagtggatgtcgaggaggtcggtgaatccgagccggcgggtggcggatgggggattgcc 293 Query: 256 gtccgtcggcggcctgctccaccccaagtcccgctcgccgcccgtgctcaccattgccct 315 ||| ||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 294 gtctgtcggtggcctgcttcaccccaagtcacgctcgccgcccgtgctcaccatcgccct 353 Query: 316 cgtggtcctgggtgtcattgttctgatcgcctacttcaacagcggctcaggtgtaactgt 375 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || Sbjct: 354 cgtggtcctgggtgtcattattctgatcgcctacttcaatagcggctcaggtgtaacagt 413 Query: 376 tacaagcagagaagctttaagcaggtctgaaggttcttgcacatcagaagtcatccaggc 435 ||| |||||||||||| | |||||||||||||||||||| ||| |||||||||| || || Sbjct: 414 tactagcagagaagctgtgagcaggtctgaaggttcttgtacaccagaagtcatgcaagc 473 Query: 436 gcttccttatcttaaaaaggcttatggcaaggagatgcaaaaggttctccatgtcggccc 495 |||||||||||||||||||| |||||||| ||| |||| |||||||||||||| ||||| Sbjct: 474 acttccttatcttaaaaaggcatatggcaatgagttgcataaggttctccatgttggccc 533 Query: 496 cgatagttgcacaatagtttctaacttgttgaaagaagggaaggttgaagcatggggagt 555 |||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 534 tgatagttgtacagtagtttctaacttgttgaaggaagggaaggttgaagcatggggagt 593 Query: 556 ggagccttatgatttggaggatgctgatagtagctgcaaaagccttgtgcgcaagggctt 615 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 594 ggagccttatgatttggaggatactgatagtagctgcaaaagccttgtgcgcaagggctt 653 Query: 616 tgtccgtatggctgacattaagttccctcttccatatcgcccacattcatttaaccttgt 675 ||| ||||||||||| || ||||||||||||||||| |||| | |||| ||||||||||| Sbjct: 654 tgttcgtatggctgatatcaagttccctcttccataccgccaagattcctttaaccttgt 713 Query: 676 tgtcgtgtcagatgctttaggttatctgaccccaaagtatctgaacaaaacactgcctga 735 | |||| ||||||||||| | |||| ||||||||| ||||||||||||||||| || || Sbjct: 714 tatcgtatcagatgctttggattatttgaccccaagatatctgaacaaaacacttccaga 773 Query: 736 tttagcaaggatttccacatatggtcttgttatctttgctggcaatccaggtcagcagaa 795 ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||| ||||| Sbjct: 774 tttagcaaggatttctacagatggtcttgttatctttgccggcaatccaggtcaacagaa 833 Query: 796 agctaaggtttctgaactaccaaaatttggaagaccagcaaagttgcggagttcttcatg 855 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| || Sbjct: 834 ggctaaggtttctgaactaccaaaattcggaagaccggcaaagttgcggagttcttcgtg 893 Query: 856 gtggactcgctactttatccagactggcttgaccgagaatgaaggaccattgaagaagtt 915 |||| | || |||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 894 gtggtcgcgatactttatccagactggcttgagagagaatgaagggccattgaagaagtt 953 Query: 916 tgagcaggctgccaaaaagaacaaatacaaaccagactgtcagatcttccaccttagttc 975 |||||||||||| |||||||||||||||||||||||||| |||||||| ||||| || Sbjct: 954 tgagcaggctgcttccaagaacaaatacaaaccagactgtcaaatcttccatcttagctc 1013 Query: 976 gtaggcttgtactgatcagggtgatgtctatccatgacaccttggatcattgcccccacc 1035 |||||| ||| |||||| |||||||| ||||||||| ||| |||||| ||| || | || Sbjct: 1014 gtaggcgtgttctgatctaggtgatgtgtatccatgaaacc-tggatcgttg-cctcgcc 1071 Query: 1036 ggttttgtaaacaatatctttgcgtatgccccgttgacttgctctccttttatgcggagg 1095 |||||||||| ||||||| || || |||||||||||||| || |||||| |||||| Sbjct: 1072 ggttttgtaagcaatatc-ctgttta-cccccgttgacttgcgcttcttttacacggagg 1129 Query: 1096 aactgtcacacaaagagcc 1114 || ||||||| ||||||| Sbjct: 1130 aattgtcacattaagagcc 1148 >gb|AY103885.1| Zea mays PCO145718 mRNA sequence Length = 1503 Score = 797 bits (402), Expect = 0.0 Identities = 684/778 (87%) Strand = Plus / Plus Query: 199 gaggatgtcgaggaggtcggtgaatccgggccggcgggtggcggacggggccctgccgtc 258 ||||||||| || ||||| |||| ||| ||||||||||||||||||||| |||||| | Sbjct: 425 gaggatgtccagacggtcgttgaacccgagccggcgggtggcggacgggggtctgccgac 484 Query: 259 cgtcggcggcctgctccaccccaagtcccgctcgccgcccgtgctcaccattgccctcgt 318 ||||| |||||| ||||||||||||| |||||||| |||||||| || |||||||| || Sbjct: 485 agtcggaggcctgttccaccccaagtcacgctcgcctcccgtgcttactattgccctagt 544 Query: 319 ggtcctgggtgtcattgttctgatcgcctacttcaacagcggctcaggtgtaactgttac 378 ||||||||||||||| |||| ||||||||||||||||| || |||||||||||||||| Sbjct: 545 cgtcctgggtgtcatttttctcgtcgcctacttcaacagcagcccaggtgtaactgttac 604 Query: 379 aagcagagaagctttaagcaggtctgaaggttcttgcacatcagaagtcatccaggcgct 438 |||||||| || | | |||||||||||||||||||||||||||||| || | |||||| Sbjct: 605 gagcagagagtctgtgaccaggtctgaaggttcttgcacatcagaagttatgcgggcgct 664 Query: 439 tccttatcttaaaaaggcttatggcaaggagatgcaaaaggttctccatgtcggccccga 498 ||| |||||||| ||||| |||||||| | |||||||||||||||||||| ||||| || Sbjct: 665 tccatatcttaagaaggcatatggcaatgccatgcaaaaggttctccatgtaggccctga 724 Query: 499 tagttgcacaatagtttctaacttgttgaaagaagggaaggttgaagcatggggagtgga 558 |||||| ||| |||||||||| |||||||||||||| ||||||||||| ||||||||||| Sbjct: 725 tagttgtacagtagtttctaatttgttgaaagaaggaaaggttgaagcttggggagtgga 784 Query: 559 gccttatgatttggaggatgctgatagtagctgcaaaagccttgtgcgcaagggctttgt 618 ||||||||||||||| ||| |||| |||| ||||||||||| ||||||||||||||||| Sbjct: 785 gccttatgatttggaagatactgacagtacttgcaaaagcctcgtgcgcaagggctttgt 844 Query: 619 ccgtatggctgacattaagttccctcttccatatcgcccacattcatttaaccttgttgt 678 ||||||| |||| ||||||||||| ||||| || || ||| |||| ||||| |||||||| Sbjct: 845 ccgtatgtctgatattaagttcccccttccgtaccgtccagattcttttaatcttgttgt 904 Query: 679 cgtgtcagatgctttaggttatctgaccccaaagtatctgaacaaaacactgcctgattt 738 |||||||||||||||| |||||||||||||| |||||||||||||||||| || ||||| Sbjct: 905 ggtgtcagatgctttagattatctgaccccaaggtatctgaacaaaacacttccagattt 964 Query: 739 agcaaggatttccacatatggtcttgttatctttgctggcaatccaggtcagcagaaagc 798 ||||||| |||||||| |||| |||||||| ||||||||||| ||||||||||||||||| Sbjct: 965 agcaagggtttccacagatggccttgttatttttgctggcaacccaggtcagcagaaagc 1024 Query: 799 taaggtttctgaactaccaaaatttggaagaccagcaaagttgcggagttcttcatggtg 858 |||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1025 taaggtctcagaactaccaaaatttggaagaccggcaaagttgcggagttcttcatggtg 1084 Query: 859 gactcgctactttatccagactggcttgaccgagaatgaaggaccattgaagaagtttga 918 ||| || |||||| ||||||| |||||||| ||||| ||||| || ||||||| || || Sbjct: 1085 gacacggtactttgtccagaccggcttgacagagaacgaagggccgctgaagaaattcga 1144 Query: 919 gcaggctgccaaaaagaacaaatacaaaccagactgtcagatcttccaccttagttcg 976 ||||| | ||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 1145 agaggctacatccaagaacaaatacaaaccaggttgtcagatcttccacctgagttcg 1202 >dbj|AK242046.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075120L13, full insert sequence Length = 3301 Score = 541 bits (273), Expect = e-150 Identities = 478/541 (88%), Gaps = 4/541 (0%) Strand = Plus / Minus Query: 574 ggatgctgatagtagctgcaaaagccttgtgcgcaagggctttgtccgtatggctgacat 633 |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 3300 ggatactgatagtagctgcaaaagccttgtgcgcaagggctttgttcgtatggctgatat 3241 Query: 634 taagttccctcttccatatcgcccacattcatttaaccttgttgtcgtgtcagatgcttt 693 ||||||||||||||||| |||| | |||| |||||||||||| |||| ||||||||||| Sbjct: 3240 caagttccctcttccataccgccaagattcctttaaccttgttatcgtatcagatgcttt 3181 Query: 694 aggttatctgaccccaaagtatctgaacaaaacactgcctgatttagcaaggatttccac 753 | |||| ||||||||| ||||||||||||||||| || ||||||||||||||||| || Sbjct: 3180 ggattatttgaccccaagatatctgaacaaaacacttccagatttagcaaggatttctac 3121 Query: 754 atatggtcttgttatctttgctggcaatccaggtcagcagaaagctaaggtttctgaact 813 | ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| Sbjct: 3120 agatggtcttgttatctttgccggcaatccaggtcaacagaaggctaaggtttctgaact 3061 Query: 814 accaaaatttggaagaccagcaaagttgcggagttcttcatggtggactcgctactttat 873 ||||||||| |||||||| |||||||||||||||||||| |||||| | || |||||||| Sbjct: 3060 accaaaattcggaagaccggcaaagttgcggagttcttcgtggtggtcgcgatactttat 3001 Query: 874 ccagactggcttgaccgagaatgaaggaccattgaagaagtttgagcaggctgccaaaaa 933 |||||||||||||| ||||||||||| |||||||||||||||||||||||||| || Sbjct: 3000 ccagactggcttgagagagaatgaagggccattgaagaagtttgagcaggctgcttccaa 2941 Query: 934 gaacaaatacaaaccagactgtcagatcttccaccttagttcgtaggcttgtactgatca 993 |||||||||||||||||||||||| |||||||| ||||| |||||||| ||| |||||| Sbjct: 2940 gaacaaatacaaaccagactgtcaaatcttccatcttagctcgtaggcgtgttctgatct 2881 Query: 994 gggtgatgtctatccatgacaccttggatcattgcccccaccggttttgtaaacaatatc 1053 |||||||| ||||||||| ||| |||||| ||| || | |||||||||||| ||||||| Sbjct: 2880 aggtgatgtgtatccatgaaacc-tggatcgttg-cctcgccggttttgtaagcaatatc 2823 Query: 1054 tttgcgtatgccccgttgacttgctctccttttatgcggaggaactgtcacacaaagagc 1113 || || |||||||||||||| || |||||| |||||||| ||||||| |||||| Sbjct: 2822 -ctgttta-cccccgttgacttgcgcttcttttacacggaggaattgtcacattaagagc 2765 Query: 1114 c 1114 | Sbjct: 2764 c 2764 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 470 bits (237), Expect = e-129 Identities = 336/369 (91%) Strand = Plus / Minus Query: 406 aggttcttgcacatcagaagtcatccaggcgcttccttatcttaaaaaggcttatggcaa 465 ||||||||| ||| |||||||||| || || |||||||||||||||||||| |||||||| Sbjct: 2379771 aggttcttgtacaccagaagtcatgcaagcacttccttatcttaaaaaggcatatggcaa 2379712 Query: 466 ggagatgcaaaaggttctccatgtcggccccgatagttgcacaatagtttctaacttgtt 525 ||| |||| |||||||||||||| ||||| |||||||| ||| |||||||||||||||| Sbjct: 2379711 tgagttgcataaggttctccatgttggccctgatagttgtacagtagtttctaacttgtt 2379652 Query: 526 gaaagaagggaaggttgaagcatggggagtggagccttatgatttggaggatgctgatag 585 ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2379651 gaaggaagggaaggttgaagcatggggagtggagccttatgatttggaggatactgatag 2379592 Query: 586 tagctgcaaaagccttgtgcgcaagggctttgtccgtatggctgacattaagttccctct 645 ||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 2379591 tagctgcaaaagccttgtgcgcaagggctttgttcgtatggctgatatcaagttccctct 2379532 Query: 646 tccatatcgcccacattcatttaaccttgttgtcgtgtcagatgctttaggttatctgac 705 |||||| |||| | |||| |||||||||||| |||| ||||||||||| | |||| |||| Sbjct: 2379531 tccataccgccaagattcctttaaccttgttatcgtatcagatgctttggattatttgac 2379472 Query: 706 cccaaagtatctgaacaaaacactgcctgatttagcaaggatttccacatatggtcttgt 765 ||||| ||||||||||||||||| || ||||||||||||||||| ||| |||||||||| Sbjct: 2379471 cccaagatatctgaacaaaacacttccagatttagcaaggatttctacagatggtcttgt 2379412 Query: 766 tatctttgc 774 ||||||||| Sbjct: 2379411 tatctttgc 2379403 Score = 218 bits (110), Expect = 4e-53 Identities = 243/282 (86%), Gaps = 4/282 (1%) Strand = Plus / Minus Query: 833 gcaaagttgcggagttcttcatggtggactcgctactttatccagactggcttgaccgag 892 |||||||||||||||||||| |||||| | || |||||||||||||||||||||| ||| Sbjct: 2378354 gcaaagttgcggagttcttcgtggtggtcgcgatactttatccagactggcttgagagag 2378295 Query: 893 aatgaaggaccattgaagaagtttgagcaggctgccaaaaagaacaaatacaaaccagac 952 |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 2378294 aatgaagggccattgaagaagtttgagcaggctgcttccaagaacaaatacaaaccagac 2378235 Query: 953 tgtcagatcttccaccttagttcgtaggcttgtactgatcagggtgatgtctatccatga 1012 ||||| |||||||| ||||| |||||||| ||| |||||| |||||||| ||||||||| Sbjct: 2378234 tgtcaaatcttccatcttagctcgtaggcgtgttctgatctaggtgatgtgtatccatga 2378175 Query: 1013 caccttggatcattgcccccaccggttttgtaaacaatatctttgcgtatgccccgttga 1072 ||| |||||| ||| || | |||||||||||| ||||||| || || ||||||||| Sbjct: 2378174 aacc-tggatcgttg-cctcgccggttttgtaagcaatatc-ctgttta-cccccgttga 2378119 Query: 1073 cttgctctccttttatgcggaggaactgtcacacaaagagcc 1114 ||||| || |||||| |||||||| ||||||| ||||||| Sbjct: 2378118 cttgcgcttcttttacacggaggaattgtcacattaagagcc 2378077 Score = 172 bits (87), Expect = 2e-39 Identities = 120/131 (91%) Strand = Plus / Minus Query: 196 ggagaggatgtcgaggaggtcggtgaatccgggccggcgggtggcggacggggccctgcc 255 |||| |||||||||||||||||||||||||| |||||||||||||||| |||| |||| Sbjct: 2381189 ggagtggatgtcgaggaggtcggtgaatccgagccggcgggtggcggatgggggattgcc 2381130 Query: 256 gtccgtcggcggcctgctccaccccaagtcccgctcgccgcccgtgctcaccattgccct 315 ||| ||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 2381129 gtctgtcggtggcctgcttcaccccaagtcacgctcgccgcccgtgctcaccatcgccct 2381070 Query: 316 cgtggtcctgg 326 ||||||||||| Sbjct: 2381069 cgtggtcctgg 2381059 Score = 87.7 bits (44), Expect = 1e-13 Identities = 53/56 (94%) Strand = Plus / Minus Query: 776 ggcaatccaggtcagcagaaagctaaggtttctgaactaccaaaatttggaagacc 831 |||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 2378930 ggcaatccaggtcaacagaaggctaaggtttctgaactaccaaaattcggaagacc 2378875