BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst031d02 (518 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|AJ314595.1|HVU314595 Hordeum vulgare mRNA for putative ribos... 389 e-105 gb|AY781904.1| Saccharum hybrid cultivar isolate c322 S27 riboso... 379 e-102 emb|CT829496.1| Oryza sativa (indica cultivar-group) cDNA clone:... 371 2e-99 ref|NM_001059047.1| Oryza sativa (japonica cultivar-group) Os04g... 371 2e-99 dbj|AK068012.1| Oryza sativa (japonica cultivar-group) cDNA clon... 371 2e-99 >emb|AJ314595.1|HVU314595 Hordeum vulgare mRNA for putative ribosomal protein S27 (rps27C gene) Length = 521 Score = 389 bits (196), Expect = e-105 Identities = 247/264 (93%) Strand = Plus / Plus Query: 92 caagatggtgctgcagaacgacatcgacctgctcaacccgccggcggagctcgagaagct 151 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 82 caagatggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagct 141 Query: 152 caagcacaagaagaagcgcctcgtccagtcccccaactcattcttcatggatgtcaagtg 211 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 142 caagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtg 201 Query: 212 ccagggttgctttaacataacgactgtgttcagccactctcagactgtggtggtgtgccc 271 |||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 202 ccagggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgccc 261 Query: 272 gggctgccaaaccgtgctctgccaacctactgggggaaaggccaggctcactgagggttg 331 ||||||||| || |||||||||||||| || || |||||||| |||||||| ||||| || Sbjct: 262 gggctgccagacggtgctctgccaacccaccggtggaaaggcgaggctcaccgagggatg 321 Query: 332 ctccttccgtcggaagggcgacta 355 ||||||||| |||||||| ||||| Sbjct: 322 ctccttccgccggaagggtgacta 345 >gb|AY781904.1| Saccharum hybrid cultivar isolate c322 S27 ribosomal protein mRNA, complete cds Length = 567 Score = 379 bits (191), Expect = e-102 Identities = 251/271 (92%) Strand = Plus / Plus Query: 82 accgcatctccaagatggtgctgcagaacgacatcgacctgctcaacccgccggcggagc 141 |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 78 accgcatctccaagatggtgctgcagaacgacatcgacttgctcaacccgccggcagagc 137 Query: 142 tcgagaagctcaagcacaagaagaagcgcctcgtccagtcccccaactcattcttcatgg 201 | |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138 ttgagaagctaaagcacaagaagaagcgcctcgtccagtcccccaactccttcttcatgg 197 Query: 202 atgtcaagtgccagggttgctttaacataacgactgtgttcagccactctcagactgtgg 261 |||||||||||||||| || || | |||||| ||||||||||||||||| |||||||||| Sbjct: 198 atgtcaagtgccagggctgtttcagcataaccactgtgttcagccactcccagactgtgg 257 Query: 262 tggtgtgcccgggctgccaaaccgtgctctgccaacctactgggggaaaggccaggctca 321 | |||||||| ||||||||||| || ||||||||||||||||| || ||||||||||||| Sbjct: 258 ttgtgtgcccaggctgccaaactgttctctgccaacctactggtgggaaggccaggctca 317 Query: 322 ctgagggttgctccttccgtcggaagggcga 352 | ||||| |||||||||||||| |||||||| Sbjct: 318 ccgaggggtgctccttccgtcgcaagggcga 348 >emb|CT829496.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI030C13, full insert sequence Length = 467 Score = 371 bits (187), Expect = 2e-99 Identities = 247/267 (92%) Strand = Plus / Plus Query: 92 caagatggtgctgcagaacgacatcgacctgctcaacccgccggcggagctcgagaagct 151 |||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 82 caagatggtgctctcgaacgacatcgacctgctgaacccgccggcggagctggagaagct 141 Query: 152 caagcacaagaagaagcgcctcgtccagtcccccaactcattcttcatggatgtcaagtg 211 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 142 caagcacaagaagaagcgcctcgtccagtcccccaactccttcttcatggatgtcaagtg 201 Query: 212 ccagggttgctttaacataacgactgtgttcagccactctcagactgtggtggtgtgccc 271 |||||| ||||| |||||||||||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 202 ccagggctgcttcaacataacgactgtattcagccactcccagaccgtggttgtgtgccc 261 Query: 272 gggctgccaaaccgtgctctgccaacctactgggggaaaggccaggctcactgagggttg 331 ||||||||| |||||||||||||| |||||||| || |||||||||||||| ||||| || Sbjct: 262 gggctgccagaccgtgctctgccagcctactggtgggaaggccaggctcacggagggctg 321 Query: 332 ctccttccgtcggaagggcgactaggt 358 ||||||||| |||||| |||||||||| Sbjct: 322 ctccttccgccggaagagcgactaggt 348 >ref|NM_001059047.1| Oryza sativa (japonica cultivar-group) Os04g0346100 (Os04g0346100) mRNA, complete cds Length = 874 Score = 371 bits (187), Expect = 2e-99 Identities = 247/267 (92%) Strand = Plus / Plus Query: 92 caagatggtgctgcagaacgacatcgacctgctcaacccgccggcggagctcgagaagct 151 |||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 82 caagatggtgctctcgaacgacatcgacctgcttaacccgccggcggagctggagaagct 141 Query: 152 caagcacaagaagaagcgcctcgtccagtcccccaactcattcttcatggatgtcaagtg 211 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 142 caagcacaagaagaagcgcctcgtccagtcccccaactccttcttcatggatgtcaagtg 201 Query: 212 ccagggttgctttaacataacgactgtgttcagccactctcagactgtggtggtgtgccc 271 |||||| ||||| |||||||||||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 202 ccagggctgcttcaacataacgactgtattcagccactcccagaccgtggttgtgtgccc 261 Query: 272 gggctgccaaaccgtgctctgccaacctactgggggaaaggccaggctcactgagggttg 331 ||||||||| |||||||||||||| |||||||| || |||||||||||||| ||||| || Sbjct: 262 gggctgccagaccgtgctctgccagcctactggtgggaaggccaggctcacggagggctg 321 Query: 332 ctccttccgtcggaagggcgactaggt 358 ||||||||| |||||| |||||||||| Sbjct: 322 ctccttccgccggaagagcgactaggt 348 >dbj|AK068012.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129I21, full insert sequence Length = 878 Score = 371 bits (187), Expect = 2e-99 Identities = 247/267 (92%) Strand = Plus / Plus Query: 92 caagatggtgctgcagaacgacatcgacctgctcaacccgccggcggagctcgagaagct 151 |||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 86 caagatggtgctctcgaacgacatcgacctgcttaacccgccggcggagctggagaagct 145 Query: 152 caagcacaagaagaagcgcctcgtccagtcccccaactcattcttcatggatgtcaagtg 211 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 146 caagcacaagaagaagcgcctcgtccagtcccccaactccttcttcatggatgtcaagtg 205 Query: 212 ccagggttgctttaacataacgactgtgttcagccactctcagactgtggtggtgtgccc 271 |||||| ||||| |||||||||||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 206 ccagggctgcttcaacataacgactgtattcagccactcccagaccgtggttgtgtgccc 265 Query: 272 gggctgccaaaccgtgctctgccaacctactgggggaaaggccaggctcactgagggttg 331 ||||||||| |||||||||||||| |||||||| || |||||||||||||| ||||| || Sbjct: 266 gggctgccagaccgtgctctgccagcctactggtgggaaggccaggctcacggagggctg 325 Query: 332 ctccttccgtcggaagggcgactaggt 358 ||||||||| |||||| |||||||||| Sbjct: 326 ctccttccgccggaagagcgactaggt 352