BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst030n11
         (524 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...   180   4e-42
dbj|AP005574.3| Oryza sativa (japonica cultivar-group) genomic D...   180   4e-42
dbj|AP005399.3| Oryza sativa (japonica cultivar-group) genomic D...   180   4e-42
ref|NM_001069967.1| Oryza sativa (japonica cultivar-group) Os09g...   176   6e-41
emb|CT833506.1| Oryza sativa (indica cultivar-group) cDNA clone:...   165   2e-37

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score =  180 bits (91), Expect = 4e-42
 Identities = 109/115 (94%)
 Strand = Plus / Minus

                                                                            
Query: 244      ccccgtctcccaccgccgaggcgccccctgcccccagcgccgccgccggcgtctcccccg 303
                ||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||
Sbjct: 17798040 ccccgtctcccaccgccgaggtgacccctccccccagcgccgccgccggcgtctcccccg 17797981

                                                                       
Query: 304      ccgccgcgtgggtcgccgcggccaccgtggccgcggccgccgcgttctactgaga 358
                ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||
Sbjct: 17797980 ccgccgcgtgggtcgccgccgccgccgtggccgccgccgccgcgttctactgaga 17797926



 Score =  129 bits (65), Expect = 1e-26
 Identities = 89/97 (91%)
 Strand = Plus / Minus

                                                                            
Query: 86       ctctcctccaatggcgcgcctccagcttgtggctttggccatggcgatgctcttcgccgc 145
                |||| |||||||||||||| ||||| | ||||| ||||||||||||||||||||||||||
Sbjct: 17798363 ctctactccaatggcgcgcttccagatcgtggccttggccatggcgatgctcttcgccgc 17798304

                                                     
Query: 146      cgccgcggctcaggccccggcggccaccccgacgccc 182
                |||  | ||||||||||||||||||||||||||||||
Sbjct: 17798303 cgcatcagctcaggccccggcggccaccccgacgccc 17798267


>dbj|AP005574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1595_D08
          Length = 116351

 Score =  180 bits (91), Expect = 4e-42
 Identities = 109/115 (94%)
 Strand = Plus / Minus

                                                                         
Query: 244   ccccgtctcccaccgccgaggcgccccctgcccccagcgccgccgccggcgtctcccccg 303
             ||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||
Sbjct: 38684 ccccgtctcccaccgccgaggtgacccctccccccagcgccgccgccggcgtctcccccg 38625

                                                                    
Query: 304   ccgccgcgtgggtcgccgcggccaccgtggccgcggccgccgcgttctactgaga 358
             ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||
Sbjct: 38624 ccgccgcgtgggtcgccgccgccgccgtggccgccgccgccgcgttctactgaga 38570



 Score =  129 bits (65), Expect = 1e-26
 Identities = 89/97 (91%)
 Strand = Plus / Minus

                                                                         
Query: 86    ctctcctccaatggcgcgcctccagcttgtggctttggccatggcgatgctcttcgccgc 145
             |||| |||||||||||||| ||||| | ||||| ||||||||||||||||||||||||||
Sbjct: 39007 ctctactccaatggcgcgcttccagatcgtggccttggccatggcgatgctcttcgccgc 38948

                                                  
Query: 146   cgccgcggctcaggccccggcggccaccccgacgccc 182
             |||  | ||||||||||||||||||||||||||||||
Sbjct: 38947 cgcatcagctcaggccccggcggccaccccgacgccc 38911


>dbj|AP005399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0676H02
          Length = 144252

 Score =  180 bits (91), Expect = 4e-42
 Identities = 109/115 (94%)
 Strand = Plus / Minus

                                                                          
Query: 244    ccccgtctcccaccgccgaggcgccccctgcccccagcgccgccgccggcgtctcccccg 303
              ||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||
Sbjct: 106674 ccccgtctcccaccgccgaggtgacccctccccccagcgccgccgccggcgtctcccccg 106615

                                                                     
Query: 304    ccgccgcgtgggtcgccgcggccaccgtggccgcggccgccgcgttctactgaga 358
              ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||
Sbjct: 106614 ccgccgcgtgggtcgccgccgccgccgtggccgccgccgccgcgttctactgaga 106560



 Score =  129 bits (65), Expect = 1e-26
 Identities = 89/97 (91%)
 Strand = Plus / Minus

                                                                          
Query: 86     ctctcctccaatggcgcgcctccagcttgtggctttggccatggcgatgctcttcgccgc 145
              |||| |||||||||||||| ||||| | ||||| ||||||||||||||||||||||||||
Sbjct: 106997 ctctactccaatggcgcgcttccagatcgtggccttggccatggcgatgctcttcgccgc 106938

                                                   
Query: 146    cgccgcggctcaggccccggcggccaccccgacgccc 182
              |||  | ||||||||||||||||||||||||||||||
Sbjct: 106937 cgcatcagctcaggccccggcggccaccccgacgccc 106901


>ref|NM_001069967.1| Oryza sativa (japonica cultivar-group) Os09g0469600 (Os09g0469600)
           mRNA, complete cds
          Length = 396

 Score =  176 bits (89), Expect = 6e-41
 Identities = 107/113 (94%)
 Strand = Plus / Plus

                                                                       
Query: 244 ccccgtctcccaccgccgaggcgccccctgcccccagcgccgccgccggcgtctcccccg 303
           ||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||
Sbjct: 284 ccccgtctcccaccgccgaggtgacccctccccccagcgccgccgccggcgtctcccccg 343

                                                                
Query: 304 ccgccgcgtgggtcgccgcggccaccgtggccgcggccgccgcgttctactga 356
           ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||
Sbjct: 344 ccgccgcgtgggtcgccgccgccgccgtggccgccgccgccgcgttctactga 396



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 54/57 (94%)
 Strand = Plus / Plus

                                                                    
Query: 126 atggcgatgctcttcgccgccgccgcggctcaggccccggcggccaccccgacgccc 182
           |||||||||||||||||||||||  | ||||||||||||||||||||||||||||||
Sbjct: 1   atggcgatgctcttcgccgccgcatcagctcaggccccggcggccaccccgacgccc 57


>emb|CT833506.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN050H21, full
           insert sequence
          Length = 577

 Score =  165 bits (83), Expect = 2e-37
 Identities = 107/115 (93%)
 Strand = Plus / Plus

                                                                       
Query: 244 ccccgtctcccaccgccgaggcgccccctgcccccagcgccgccgccggcgtctcccccg 303
           ||||||||||||||||||||| | ||||| |||||||||||||||||| |||||||||||
Sbjct: 97  ccccgtctcccaccgccgaggtgacccctccccccagcgccgccgccgtcgtctcccccg 156

                                                                  
Query: 304 ccgccgcgtgggtcgccgcggccaccgtggccgcggccgccgcgttctactgaga 358
           ||||||||||||||||||| ||| ||||||| || ||||||||||||||||||||
Sbjct: 157 ccgccgcgtgggtcgccgccgccgccgtggcagccgccgccgcgttctactgaga 211