BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst030j24 (889 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001057683.1| Oryza sativa (japonica cultivar-group) Os03g... 329 1e-86 gb|AC135956.6| Oryza sativa (japonica cultivar-group) chromosome... 329 1e-86 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 329 1e-86 dbj|AK107116.1| Oryza sativa (japonica cultivar-group) cDNA clon... 329 1e-86 gb|AY112134.1| Zea mays CL52093_1 mRNA sequence 206 1e-49 >ref|NM_001057683.1| Oryza sativa (japonica cultivar-group) Os03g0728600 (Os03g0728600) mRNA, complete cds Length = 1269 Score = 329 bits (166), Expect = 1e-86 Identities = 217/234 (92%) Strand = Plus / Plus Query: 60 acgatggccgagacggtggacttcgtgagcagcgacgcggcggcgtggcgtgcttcgctg 119 ||||||||||||||||||||||||| |||| |||||||||||| |||||| || ||||| Sbjct: 57 acgatggccgagacggtggacttcgcgagcggcgacgcggcggagtggcgagcggcgctg 116 Query: 120 gctgcgtacgaccgccggctcgcgtccctgggcaagcccgacctcgtggacgtggactcc 179 || ||||||||||||||||||||| |||||||||||||||||||||| || || |||||| Sbjct: 117 gcggcgtacgaccgccggctcgcggccctgggcaagcccgacctcgtcgaggtcgactcc 176 Query: 180 ttctaccgccacgacctccccgccctcctgcgccgccgcgacccggatcccttcctcgcc 239 |||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 177 ttctaccgccgcgacctccccgatctcctgcgccgccgcgacccggagcccttcctcgcc 236 Query: 240 aagcccgagctggtacgcctcctccagtggaagctctcccgcggcaagtggagg 293 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 237 aagcccgagctggtgcgcctcctccaatggaagctctcccgcggcaagtggagg 290 Score = 293 bits (148), Expect = 6e-76 Identities = 316/372 (84%) Strand = Plus / Plus Query: 291 aggccgaggctgatggatttcgtcaagagtttggatgatgcagcggtagaatcagcatcg 350 |||||||| |||||||||||||||||| | ||||| ||||||| |||||||||||||||| Sbjct: 612 aggccgagactgatggatttcgtcaagggcttggaggatgcagtggtagaatcagcatcg 671 Query: 351 cgcaaggcattcgcggcgctgcccaatctcagcagggccattggcgagctcaccgtcctc 410 ||||||| ||||| |||||||| | ||| ||| |||||| |||||||||||| || Sbjct: 672 tgcaaggcgttcgcagcgctgcctgacctccgcaaggccatcaccgagctcaccgtgctg 731 Query: 411 aagggcgttggccccgccaccgcatccgccgtgctcgctgcctatgcgcccgatgttgcg 470 |||||||||||||| ||||| |||||||| || ||||||||||| ||||| |||||||| Sbjct: 732 aagggcgttggccctgccacggcatccgctgttctcgctgcctacgcgcctgatgttgca 791 Query: 471 cccttcatgtcggacgaagcgatggtggcagccttgggtaatgcaaaggagtacactctg 530 || |||||||| || || || |||||||||||||| || ||||||||||||||||||||| Sbjct: 792 ccgttcatgtctgatgaggctatggtggcagccttaggcaatgcaaaggagtacactctg 851 Query: 531 aagcagttccttgcgttcgctgagaagttgcaggctaaagcgaaggaattgagcgtagga 590 ||||||| ||||| || ||||| |||||||| ||||| |||||||||||||| |||| Sbjct: 852 aagcagtatcttgcttttgctgaaaagttgcaaactaaatcgaaggaattgagctcagga 911 Query: 591 ggggaaagtttcacaccttcagatgttgagagagcgttgtggagctcgaccgttggctcc 650 | ||| |||||| |||| ||||||||||||||| |||||||||| | |||| ||| Sbjct: 912 gaagaagttttcactacttctgatgttgagagagcgctgtggagctcagcagttgcatcc 971 Query: 651 aagtcgcttaag 662 ||||| |||||| Sbjct: 972 aagtctcttaag 983 >gb|AC135956.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0005H20, complete sequence Length = 135560 Score = 329 bits (166), Expect = 1e-86 Identities = 217/234 (92%) Strand = Plus / Plus Query: 60 acgatggccgagacggtggacttcgtgagcagcgacgcggcggcgtggcgtgcttcgctg 119 ||||||||||||||||||||||||| |||| |||||||||||| |||||| || ||||| Sbjct: 31805 acgatggccgagacggtggacttcgcgagcggcgacgcggcggagtggcgagcggcgctg 31864 Query: 120 gctgcgtacgaccgccggctcgcgtccctgggcaagcccgacctcgtggacgtggactcc 179 || ||||||||||||||||||||| |||||||||||||||||||||| || || |||||| Sbjct: 31865 gcggcgtacgaccgccggctcgcggccctgggcaagcccgacctcgtcgaggtcgactcc 31924 Query: 180 ttctaccgccacgacctccccgccctcctgcgccgccgcgacccggatcccttcctcgcc 239 |||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 31925 ttctaccgccgcgacctccccgatctcctgcgccgccgcgacccggagcccttcctcgcc 31984 Query: 240 aagcccgagctggtacgcctcctccagtggaagctctcccgcggcaagtggagg 293 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 31985 aagcccgagctggtgcgcctcctccaatggaagctctcccgcggcaagtggagg 32038 Score = 172 bits (87), Expect = 2e-39 Identities = 165/191 (86%) Strand = Plus / Plus Query: 291 aggccgaggctgatggatttcgtcaagagtttggatgatgcagcggtagaatcagcatcg 350 |||||||| |||||||||||||||||| | ||||| ||||||| |||||||||||||||| Sbjct: 32360 aggccgagactgatggatttcgtcaagggcttggaggatgcagtggtagaatcagcatcg 32419 Query: 351 cgcaaggcattcgcggcgctgcccaatctcagcagggccattggcgagctcaccgtcctc 410 ||||||| ||||| |||||||| | ||| ||| |||||| |||||||||||| || Sbjct: 32420 tgcaaggcgttcgcagcgctgcctgacctccgcaaggccatcaccgagctcaccgtgctg 32479 Query: 411 aagggcgttggccccgccaccgcatccgccgtgctcgctgcctatgcgcccgatgttgcg 470 |||||||||||||| ||||| |||||||| || ||||||||||| ||||| |||||||| Sbjct: 32480 aagggcgttggccctgccacggcatccgctgttctcgctgcctacgcgcctgatgttgca 32539 Query: 471 cccttcatgtc 481 || |||||||| Sbjct: 32540 ccgttcatgtc 32550 Score = 91.7 bits (46), Expect = 5e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 492 atggtggcagccttgggtaatgcaaaggagtacactctgaagcagttccttgcgttcgct 551 |||||||||||||| || |||||||||||||||||||||||||||| ||||| || ||| Sbjct: 32652 atggtggcagccttaggcaatgcaaaggagtacactctgaagcagtatcttgcttttgct 32711 Query: 552 gagaagttgcaggctaaagcgaaggaattg 581 || |||||||| ||||| |||||| |||| Sbjct: 32712 gaaaagttgcaaactaaatcgaaggtattg 32741 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 329 bits (166), Expect = 1e-86 Identities = 217/234 (92%) Strand = Plus / Minus Query: 60 acgatggccgagacggtggacttcgtgagcagcgacgcggcggcgtggcgtgcttcgctg 119 ||||||||||||||||||||||||| |||| |||||||||||| |||||| || ||||| Sbjct: 29546918 acgatggccgagacggtggacttcgcgagcggcgacgcggcggagtggcgagcggcgctg 29546859 Query: 120 gctgcgtacgaccgccggctcgcgtccctgggcaagcccgacctcgtggacgtggactcc 179 || ||||||||||||||||||||| |||||||||||||||||||||| || || |||||| Sbjct: 29546858 gcggcgtacgaccgccggctcgcggccctgggcaagcccgacctcgtcgaggtcgactcc 29546799 Query: 180 ttctaccgccacgacctccccgccctcctgcgccgccgcgacccggatcccttcctcgcc 239 |||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 29546798 ttctaccgccgcgacctccccgatctcctgcgccgccgcgacccggagcccttcctcgcc 29546739 Query: 240 aagcccgagctggtacgcctcctccagtggaagctctcccgcggcaagtggagg 293 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 29546738 aagcccgagctggtgcgcctcctccaatggaagctctcccgcggcaagtggagg 29546685 Score = 172 bits (87), Expect = 2e-39 Identities = 165/191 (86%) Strand = Plus / Minus Query: 291 aggccgaggctgatggatttcgtcaagagtttggatgatgcagcggtagaatcagcatcg 350 |||||||| |||||||||||||||||| | ||||| ||||||| |||||||||||||||| Sbjct: 29546363 aggccgagactgatggatttcgtcaagggcttggaggatgcagtggtagaatcagcatcg 29546304 Query: 351 cgcaaggcattcgcggcgctgcccaatctcagcagggccattggcgagctcaccgtcctc 410 ||||||| ||||| |||||||| | ||| ||| |||||| |||||||||||| || Sbjct: 29546303 tgcaaggcgttcgcagcgctgcctgacctccgcaaggccatcaccgagctcaccgtgctg 29546244 Query: 411 aagggcgttggccccgccaccgcatccgccgtgctcgctgcctatgcgcccgatgttgcg 470 |||||||||||||| ||||| |||||||| || ||||||||||| ||||| |||||||| Sbjct: 29546243 aagggcgttggccctgccacggcatccgctgttctcgctgcctacgcgcctgatgttgca 29546184 Query: 471 cccttcatgtc 481 || |||||||| Sbjct: 29546183 ccgttcatgtc 29546173 Score = 91.7 bits (46), Expect = 5e-15 Identities = 79/90 (87%) Strand = Plus / Minus Query: 492 atggtggcagccttgggtaatgcaaaggagtacactctgaagcagttccttgcgttcgct 551 |||||||||||||| || |||||||||||||||||||||||||||| ||||| || ||| Sbjct: 29546071 atggtggcagccttaggcaatgcaaaggagtacactctgaagcagtatcttgcttttgct 29546012 Query: 552 gagaagttgcaggctaaagcgaaggaattg 581 || |||||||| ||||| |||||| |||| Sbjct: 29546011 gaaaagttgcaaactaaatcgaaggtattg 29545982 >dbj|AK107116.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-A11, full insert sequence Length = 1269 Score = 329 bits (166), Expect = 1e-86 Identities = 217/234 (92%) Strand = Plus / Plus Query: 60 acgatggccgagacggtggacttcgtgagcagcgacgcggcggcgtggcgtgcttcgctg 119 ||||||||||||||||||||||||| |||| |||||||||||| |||||| || ||||| Sbjct: 57 acgatggccgagacggtggacttcgcgagcggcgacgcggcggagtggcgagcggcgctg 116 Query: 120 gctgcgtacgaccgccggctcgcgtccctgggcaagcccgacctcgtggacgtggactcc 179 || ||||||||||||||||||||| |||||||||||||||||||||| || || |||||| Sbjct: 117 gcggcgtacgaccgccggctcgcggccctgggcaagcccgacctcgtcgaggtcgactcc 176 Query: 180 ttctaccgccacgacctccccgccctcctgcgccgccgcgacccggatcccttcctcgcc 239 |||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 177 ttctaccgccgcgacctccccgatctcctgcgccgccgcgacccggagcccttcctcgcc 236 Query: 240 aagcccgagctggtacgcctcctccagtggaagctctcccgcggcaagtggagg 293 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 237 aagcccgagctggtgcgcctcctccaatggaagctctcccgcggcaagtggagg 290 Score = 293 bits (148), Expect = 6e-76 Identities = 316/372 (84%) Strand = Plus / Plus Query: 291 aggccgaggctgatggatttcgtcaagagtttggatgatgcagcggtagaatcagcatcg 350 |||||||| |||||||||||||||||| | ||||| ||||||| |||||||||||||||| Sbjct: 612 aggccgagactgatggatttcgtcaagggcttggaggatgcagtggtagaatcagcatcg 671 Query: 351 cgcaaggcattcgcggcgctgcccaatctcagcagggccattggcgagctcaccgtcctc 410 ||||||| ||||| |||||||| | ||| ||| |||||| |||||||||||| || Sbjct: 672 tgcaaggcgttcgcagcgctgcctgacctccgcaaggccatcaccgagctcaccgtgctg 731 Query: 411 aagggcgttggccccgccaccgcatccgccgtgctcgctgcctatgcgcccgatgttgcg 470 |||||||||||||| ||||| |||||||| || ||||||||||| ||||| |||||||| Sbjct: 732 aagggcgttggccctgccacggcatccgctgttctcgctgcctacgcgcctgatgttgca 791 Query: 471 cccttcatgtcggacgaagcgatggtggcagccttgggtaatgcaaaggagtacactctg 530 || |||||||| || || || |||||||||||||| || ||||||||||||||||||||| Sbjct: 792 ccgttcatgtctgatgaggctatggtggcagccttaggcaatgcaaaggagtacactctg 851 Query: 531 aagcagttccttgcgttcgctgagaagttgcaggctaaagcgaaggaattgagcgtagga 590 ||||||| ||||| || ||||| |||||||| ||||| |||||||||||||| |||| Sbjct: 852 aagcagtatcttgcttttgctgaaaagttgcaaactaaatcgaaggaattgagctcagga 911 Query: 591 ggggaaagtttcacaccttcagatgttgagagagcgttgtggagctcgaccgttggctcc 650 | ||| |||||| |||| ||||||||||||||| |||||||||| | |||| ||| Sbjct: 912 gaagaagttttcactacttctgatgttgagagagcgctgtggagctcagcagttgcatcc 971 Query: 651 aagtcgcttaag 662 ||||| |||||| Sbjct: 972 aagtctcttaag 983 >gb|AY112134.1| Zea mays CL52093_1 mRNA sequence Length = 564 Score = 206 bits (104), Expect = 1e-49 Identities = 199/231 (86%) Strand = Plus / Minus Query: 408 ctcaagggcgttggccccgccaccgcatccgccgtgctcgctgcctatgcgcccgatgtt 467 |||||||| || || |||||| | || ||| ||||||||||||| ||||| || ||||| Sbjct: 564 ctcaagggagtcggacccgcccctgcgtccnccgtgctcgctgcgtatgcacctgatgtc 505 Query: 468 gcgcccttcatgtcggacgaagcgatggtggcagccttgggtaatgcaaaggagtacact 527 || || |||||||| ||||| |||||||| ||||||||||| ||| |||||||||||||| Sbjct: 504 gctccgttcatgtctgacgaggcgatggtagcagccttgggcaattcaaaggagtacact 445 Query: 528 ctgaagcagttccttgcgttcgctgagaagttgcaggctaaagcgaaggaattgagcgta 587 |||||||||| |||||| || ||||| || |||||||| |||||||||||| ||||| || Sbjct: 444 ctgaagcagtaccttgcatttgctgataaattgcaggcaaaagcgaaggaactgagcata 385 Query: 588 ggaggggaaagtttcacaccttcagatgttgagagagcgttgtggagctcg 638 |||| |||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 384 ggagaagaaagtttcacaccctcagatgtcgagagagcactgtggagctcg 334