BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst030a14 (988 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001060182.1| Oryza sativa (japonica cultivar-group) Os04g... 291 3e-75 dbj|AK121581.1| Oryza sativa (japonica cultivar-group) cDNA clon... 291 3e-75 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 145 4e-31 emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromosome 4,... 145 4e-31 gb|AY110981.1| Zea mays CL44238_1 mRNA sequence 98 8e-17 >ref|NM_001060182.1| Oryza sativa (japonica cultivar-group) Os04g0580400 (Os04g0580400) mRNA, partial cds Length = 554 Score = 291 bits (147), Expect = 3e-75 Identities = 258/295 (87%) Strand = Plus / Plus Query: 316 ggatgggtccgtcaacctcatggtctggcgttgcgtcgtccccggcaaggaaggcactga 375 |||||||||||||||||||||||||||||| ||| || |||||||||| ||||| ||||| Sbjct: 1 ggatgggtccgtcaacctcatggtctggcgatgcatcatccccggcaaagaagggactga 60 Query: 376 ctgggagggtggatatttcccccttactttgcaattcaatgaagattacccaagtagccc 435 |||||||||||||||||||| |||||| ||||||||| |||||| || |||| | | | Sbjct: 61 ttgggagggtggatatttcccacttactatgcaattcactgaagactatccaaccaacgc 120 Query: 436 tcccacctgcaagtttccttcaggtttcttccacgtcaatgtctacgattctggggcagt 495 ||| | |||||||| || || |||||||||||| |||||||||| || ||||||||||| Sbjct: 121 tccttcttgcaagttcccatcgggtttcttccacatcaatgtctatgactctggggcagt 180 Query: 496 atgcctatcaatcttgagtagtggatggaaaccgtcaattacggtgaagcaaattcttgt 555 |||||||||||||||||||| | ||||||||| |||||||| |||| |||||||||| | Sbjct: 181 atgcctatcaatcttgagtaccgcatggaaaccttcaattacagtgaggcaaattcttat 240 Query: 556 aggcatccaggagttgcttgataacccaaatcctaactctgccgcacagaatata 610 |||||||||||| ||| ||||| | ||||| ||||||||||| |||||||||||| Sbjct: 241 aggcatccaggaattgtttgatgatccaaaccctaactctgctgcacagaatata 295 >dbj|AK121581.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037C10, full insert sequence Length = 555 Score = 291 bits (147), Expect = 3e-75 Identities = 258/295 (87%) Strand = Plus / Plus Query: 316 ggatgggtccgtcaacctcatggtctggcgttgcgtcgtccccggcaaggaaggcactga 375 |||||||||||||||||||||||||||||| ||| || |||||||||| ||||| ||||| Sbjct: 2 ggatgggtccgtcaacctcatggtctggcgatgcatcatccccggcaaagaagggactga 61 Query: 376 ctgggagggtggatatttcccccttactttgcaattcaatgaagattacccaagtagccc 435 |||||||||||||||||||| |||||| ||||||||| |||||| || |||| | | | Sbjct: 62 ttgggagggtggatatttcccacttactatgcaattcactgaagactatccaaccaacgc 121 Query: 436 tcccacctgcaagtttccttcaggtttcttccacgtcaatgtctacgattctggggcagt 495 ||| | |||||||| || || |||||||||||| |||||||||| || ||||||||||| Sbjct: 122 tccttcttgcaagttcccatcgggtttcttccacatcaatgtctatgactctggggcagt 181 Query: 496 atgcctatcaatcttgagtagtggatggaaaccgtcaattacggtgaagcaaattcttgt 555 |||||||||||||||||||| | ||||||||| |||||||| |||| |||||||||| | Sbjct: 182 atgcctatcaatcttgagtaccgcatggaaaccttcaattacagtgaggcaaattcttat 241 Query: 556 aggcatccaggagttgcttgataacccaaatcctaactctgccgcacagaatata 610 |||||||||||| ||| ||||| | ||||| ||||||||||| |||||||||||| Sbjct: 242 aggcatccaggaattgtttgatgatccaaaccctaactctgctgcacagaatata 296 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 145 bits (73), Expect = 4e-31 Identities = 85/89 (95%) Strand = Plus / Minus Query: 281 tttcagggcttcgtggccaagccggagaccctgccggatgggtccgtcaacctcatggtc 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29265011 tttcagggcttcgtggccaagccggagaccctgccggatgggtccgtcaacctcatggtc 29264952 Query: 341 tggcgttgcgtcgtccccggcaaggaagg 369 ||||| ||| || |||||||||| ||||| Sbjct: 29264951 tggcgatgcatcatccccggcaaagaagg 29264923 Score = 137 bits (69), Expect = 1e-28 Identities = 126/145 (86%) Strand = Plus / Minus Query: 371 actgactgggagggtggatatttcccccttactttgcaattcaatgaagattacccaagt 430 ||||| |||||||||||||||||||| |||||| ||||||||| |||||| || |||| Sbjct: 29263141 actgattgggagggtggatatttcccacttactatgcaattcactgaagactatccaacc 29263082 Query: 431 agccctcccacctgcaagtttccttcaggtttcttccacgtcaatgtctacgattctggg 490 | | |||| | |||||||| || || |||||||||||| |||||||||| || |||||| Sbjct: 29263081 aacgctccttcttgcaagttcccatcgggtttcttccacatcaatgtctatgactctggg 29263022 Query: 491 gcagtatgcctatcaatcttgagta 515 ||||||||||||||||||||||||| Sbjct: 29263021 gcagtatgcctatcaatcttgagta 29262997 Score = 117 bits (59), Expect = 9e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 92 ggaggcatcgcccgcggccgcctcgccgaggagcgcaagtcgtggcgcaagaaccacccc 151 |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 29265213 ggaggcatcgcccgcgcccgcctcgccgaggagcgcaaggcgtggcgcaagaaccacccc 29265154 Query: 152 catgtgc 158 ||||||| Sbjct: 29265153 catgtgc 29265147 Score = 101 bits (51), Expect = 5e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 520 atggaaaccgtcaattacggtgaagcaaattcttgtaggcatccaggagttgcttgataa 579 ||||||||| |||||||| |||| |||||||||| ||||||||||||| ||| ||||| | Sbjct: 29262907 atggaaaccttcaattacagtgaggcaaattcttataggcatccaggaattgtttgatga 29262848 Query: 580 cccaaatcctaactctgccgcacagaatata 610 ||||| ||||||||||| |||||||||||| Sbjct: 29262847 tccaaaccctaactctgctgcacagaatata 29262817 >emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064M23, complete sequence Length = 149892 Score = 145 bits (73), Expect = 4e-31 Identities = 85/89 (95%) Strand = Plus / Minus Query: 281 tttcagggcttcgtggccaagccggagaccctgccggatgggtccgtcaacctcatggtc 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68057 tttcagggcttcgtggccaagccggagaccctgccggatgggtccgtcaacctcatggtc 67998 Query: 341 tggcgttgcgtcgtccccggcaaggaagg 369 ||||| ||| || |||||||||| ||||| Sbjct: 67997 tggcgatgcatcatccccggcaaagaagg 67969 Score = 137 bits (69), Expect = 1e-28 Identities = 126/145 (86%) Strand = Plus / Minus Query: 371 actgactgggagggtggatatttcccccttactttgcaattcaatgaagattacccaagt 430 ||||| |||||||||||||||||||| |||||| ||||||||| |||||| || |||| Sbjct: 66187 actgattgggagggtggatatttcccacttactatgcaattcactgaagactatccaacc 66128 Query: 431 agccctcccacctgcaagtttccttcaggtttcttccacgtcaatgtctacgattctggg 490 | | |||| | |||||||| || || |||||||||||| |||||||||| || |||||| Sbjct: 66127 aacgctccttcttgcaagttcccatcgggtttcttccacatcaatgtctatgactctggg 66068 Query: 491 gcagtatgcctatcaatcttgagta 515 ||||||||||||||||||||||||| Sbjct: 66067 gcagtatgcctatcaatcttgagta 66043 Score = 117 bits (59), Expect = 9e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 92 ggaggcatcgcccgcggccgcctcgccgaggagcgcaagtcgtggcgcaagaaccacccc 151 |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 68259 ggaggcatcgcccgcgcccgcctcgccgaggagcgcaaggcgtggcgcaagaaccacccc 68200 Query: 152 catgtgc 158 ||||||| Sbjct: 68199 catgtgc 68193 Score = 101 bits (51), Expect = 5e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 520 atggaaaccgtcaattacggtgaagcaaattcttgtaggcatccaggagttgcttgataa 579 ||||||||| |||||||| |||| |||||||||| ||||||||||||| ||| ||||| | Sbjct: 65953 atggaaaccttcaattacagtgaggcaaattcttataggcatccaggaattgtttgatga 65894 Query: 580 cccaaatcctaactctgccgcacagaatata 610 ||||| ||||||||||| |||||||||||| Sbjct: 65893 tccaaaccctaactctgctgcacagaatata 65863 >gb|AY110981.1| Zea mays CL44238_1 mRNA sequence Length = 626 Score = 97.6 bits (49), Expect = 8e-17 Identities = 94/109 (86%) Strand = Plus / Minus Query: 288 gcttcgtggccaagccggagaccctgccggatgggtccgtcaacctcatggtctggcgtt 347 |||| ||||||||||||| || ||||||||||| || ||||| |||||| ||||| | Sbjct: 593 gctttgtggccaagccggcgatgctgccggatggttctgtcaatctcatgctctggaact 534 Query: 348 gcgtcgtccccggcaaggaaggcactgactgggagggtggatatttccc 396 ||||||||||||||||| ||||| |||| ||||| |||||||||||||| Sbjct: 533 gcgtcgtccccggcaagaaaggccctgattgggaaggtggatatttccc 485