BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst029k04 (940 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001059087.1| Oryza sativa (japonica cultivar-group) Os04g... 404 e-109 dbj|AK070144.1| Oryza sativa (japonica cultivar-group) cDNA clon... 404 e-109 emb|CT832558.1| Oryza sativa (indica cultivar-group) cDNA clone:... 357 5e-95 emb|CR855085.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 258 4e-65 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 258 4e-65 >ref|NM_001059087.1| Oryza sativa (japonica cultivar-group) Os04g0363700 (Os04g0363700) mRNA, partial cds Length = 1991 Score = 404 bits (204), Expect = e-109 Identities = 285/312 (91%) Strand = Plus / Plus Query: 283 ggcaatgatttgtggcaaagttggacaagtgcctgtgcagaaaatattcaggaatgggca 342 |||||| |||||||| ||||||||||||||||| || ||||||||| | || || ||||| Sbjct: 914 ggcaattatttgtggaaaagttggacaagtgccagtacagaaaatactaagaaacgggca 973 Query: 343 cacggtaactgtatttactgttgggacagggggcatgtttgaccagaggacagtagctgc 402 || |||||||| ||||||||||| ||||| ||||||||||||||||||||||||| ||| Sbjct: 974 tacagtaactgtctttactgttggaacaggtggcatgtttgaccagaggacagtaggtgc 1033 Query: 403 tgagaacttgccaatgccagctcagtggcatcgaatagctattcataatgagcagcttgg 462 ||| ||||||||||||||||||||||||||||||||| || |||| |||||||||||||| Sbjct: 1034 tgaaaacttgccaatgccagctcagtggcatcgaatatctgttcacaatgagcagcttgg 1093 Query: 463 tgcatatgctgttcagaagttagtcaagaatgctgcagtctatgttgagggtgatattga 522 ||||| ||| ||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 1094 tgcatttgccgttcagaagttagtcaagaattctgcagtctacgttgagggtgatattga 1153 Query: 523 gactagagtctacaatgacagaatcaacgatcaagtgaaaaatatacctgagatctgtgt 582 ||| |||||||||||||||||||| || |||||||||||||||||||| ||||||||||| Sbjct: 1154 gaccagagtctacaatgacagaattaatgatcaagtgaaaaatataccagagatctgtgt 1213 Query: 583 gcgacgtgatgg 594 ||| |||||||| Sbjct: 1214 gcggcgtgatgg 1225 Score = 97.6 bits (49), Expect = 8e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 163 tacagaaaatcacaagcatggagctctacagtttctttttctgatgttgatgagaagaat 222 ||||||||||| |||||||||| ||| || | |||||||||||||| |||||||||||| Sbjct: 690 tacagaaaatcgcaagcatggaactcgactgcgtctttttctgatgtcgatgagaagaat 749 Query: 223 ggcatgggtggtgatgccgatgatgattt 251 ||| ||||||||||||||| |||||||| Sbjct: 750 cgcaagggtggtgatgccgaagatgattt 778 >dbj|AK070144.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041C16, full insert sequence Length = 1992 Score = 404 bits (204), Expect = e-109 Identities = 285/312 (91%) Strand = Plus / Plus Query: 283 ggcaatgatttgtggcaaagttggacaagtgcctgtgcagaaaatattcaggaatgggca 342 |||||| |||||||| ||||||||||||||||| || ||||||||| | || || ||||| Sbjct: 915 ggcaattatttgtggaaaagttggacaagtgccagtacagaaaatactaagaaacgggca 974 Query: 343 cacggtaactgtatttactgttgggacagggggcatgtttgaccagaggacagtagctgc 402 || |||||||| ||||||||||| ||||| ||||||||||||||||||||||||| ||| Sbjct: 975 tacagtaactgtctttactgttggaacaggtggcatgtttgaccagaggacagtaggtgc 1034 Query: 403 tgagaacttgccaatgccagctcagtggcatcgaatagctattcataatgagcagcttgg 462 ||| ||||||||||||||||||||||||||||||||| || |||| |||||||||||||| Sbjct: 1035 tgaaaacttgccaatgccagctcagtggcatcgaatatctgttcacaatgagcagcttgg 1094 Query: 463 tgcatatgctgttcagaagttagtcaagaatgctgcagtctatgttgagggtgatattga 522 ||||| ||| ||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 1095 tgcatttgccgttcagaagttagtcaagaattctgcagtctacgttgagggtgatattga 1154 Query: 523 gactagagtctacaatgacagaatcaacgatcaagtgaaaaatatacctgagatctgtgt 582 ||| |||||||||||||||||||| || |||||||||||||||||||| ||||||||||| Sbjct: 1155 gaccagagtctacaatgacagaattaatgatcaagtgaaaaatataccagagatctgtgt 1214 Query: 583 gcgacgtgatgg 594 ||| |||||||| Sbjct: 1215 gcggcgtgatgg 1226 Score = 97.6 bits (49), Expect = 8e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 163 tacagaaaatcacaagcatggagctctacagtttctttttctgatgttgatgagaagaat 222 ||||||||||| |||||||||| ||| || | |||||||||||||| |||||||||||| Sbjct: 691 tacagaaaatcgcaagcatggaactcgactgcgtctttttctgatgtcgatgagaagaat 750 Query: 223 ggcatgggtggtgatgccgatgatgattt 251 ||| ||||||||||||||| |||||||| Sbjct: 751 cgcaagggtggtgatgccgaagatgattt 779 >emb|CT832558.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109I16, full insert sequence Length = 1137 Score = 357 bits (180), Expect = 5e-95 Identities = 270/300 (90%) Strand = Plus / Plus Query: 374 ggcatgtttgaccagaggacagtagctgctgagaacttgccaatgccagctcagtggcat 433 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 449 ggcatgtttgaccagaggacagtaggtgctgaaaacttgccaatgccagctcagtggcat 508 Query: 434 cgaatagctattcataatgagcagcttggtgcatatgctgttcagaagttagtcaagaat 493 |||||| || |||| ||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 509 cgaatatctgttcacaatgagcagcttggtgcatttgccgttcagaagttagtcaagaat 568 Query: 494 gctgcagtctatgttgagggtgatattgagactagagtctacaatgacagaatcaacgat 553 |||||||||| |||||||||||||| ||||| |||||||||||||||||||| || ||| Sbjct: 569 tctgcagtctacgttgagggtgatatcgagaccagagtctacaatgacagaattaatgat 628 Query: 554 caagtgaaaaatatacctgagatctgtgtgcgacgtgatggcaggattcgcttgattcaa 613 ||||||||||||||||| |||||||||||||| |||||||| | ||||| ||||| ||| Sbjct: 629 caagtgaaaaatataccagagatctgtgtgcggcgtgatgggaagattcagttgatgcaa 688 Query: 614 tccggggatagtgatgtcagcaaatcattagatgaattaagggaaggactattctagttg 673 || || ||||| |||| |||||||||| || || |||||||||||| ||||||||||| Sbjct: 689 tctggtgatagcaatgttggcaaatcattggaggagttaagggaaggattattctagttg 748 Score = 151 bits (76), Expect = 6e-33 Identities = 121/136 (88%) Strand = Plus / Plus Query: 116 tgagcctgaggaggctcttaggacagcaaagaaattcagttgatttatacagaaaatcac 175 ||||| ||||||||||| |||||||||||||||| |||||||| || ||||||||||| | Sbjct: 268 tgagcgtgaggaggctcctaggacagcaaagaaactcagttgagttttacagaaaatcgc 327 Query: 176 aagcatggagctctacagtttctttttctgatgttgatgagaagaatggcatgggtggtg 235 ||||||||| ||| || | |||||||||||||| |||||||||||| ||| |||||||| Sbjct: 328 aagcatggaactcgactgcgtctttttctgatgtcgatgagaagaatcgcaagggtggtg 387 Query: 236 atgccgatgatgattt 251 ||||||| |||||||| Sbjct: 388 atgccgaagatgattt 403 >emb|CR855085.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0150M16, complete sequence Length = 80612 Score = 258 bits (130), Expect = 4e-65 Identities = 190/210 (90%) Strand = Plus / Minus Query: 283 ggcaatgatttgtggcaaagttggacaagtgcctgtgcagaaaatattcaggaatgggca 342 |||||| |||||||| ||||||||||||||||| || ||||||||| | || || ||||| Sbjct: 28869 ggcaattatttgtggaaaagttggacaagtgccagtacagaaaatactaagaaacgggca 28810 Query: 343 cacggtaactgtatttactgttgggacagggggcatgtttgaccagaggacagtagctgc 402 || |||||||| ||||||||||| ||||| ||||||||||||||||||||||||| ||| Sbjct: 28809 tacagtaactgtctttactgttggaacaggtggcatgtttgaccagaggacagtaggtgc 28750 Query: 403 tgagaacttgccaatgccagctcagtggcatcgaatagctattcataatgagcagcttgg 462 ||| ||||||||||||||||||||||||||||||||| || |||| |||||||||||||| Sbjct: 28749 tgaaaacttgccaatgccagctcagtggcatcgaatatctgttcacaatgagcagcttgg 28690 Query: 463 tgcatatgctgttcagaagttagtcaagaa 492 ||||| ||| |||||||||||||||||||| Sbjct: 28689 tgcatttgccgttcagaagttagtcaagaa 28660 Score = 151 bits (76), Expect = 6e-33 Identities = 94/100 (94%) Strand = Plus / Minus Query: 495 ctgcagtctatgttgagggtgatattgagactagagtctacaatgacagaatcaacgatc 554 |||||||||| |||||||||||||||||||| |||||||||||||||||||| || |||| Sbjct: 28549 ctgcagtctacgttgagggtgatattgagaccagagtctacaatgacagaattaatgatc 28490 Query: 555 aagtgaaaaatatacctgagatctgtgtgcgacgtgatgg 594 |||||||||||||||| |||||||||||||| |||||||| Sbjct: 28489 aagtgaaaaatataccagagatctgtgtgcggcgtgatgg 28450 Score = 97.6 bits (49), Expect = 8e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 163 tacagaaaatcacaagcatggagctctacagtttctttttctgatgttgatgagaagaat 222 ||||||||||| |||||||||| ||| || | |||||||||||||| |||||||||||| Sbjct: 29093 tacagaaaatcgcaagcatggaactcgactgcgtctttttctgatgtcgatgagaagaat 29034 Query: 223 ggcatgggtggtgatgccgatgatgattt 251 ||| ||||||||||||||| |||||||| Sbjct: 29033 cgcaagggtggtgatgccgaagatgattt 29005 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 258 bits (130), Expect = 4e-65 Identities = 190/210 (90%) Strand = Plus / Minus Query: 283 ggcaatgatttgtggcaaagttggacaagtgcctgtgcagaaaatattcaggaatgggca 342 |||||| |||||||| ||||||||||||||||| || ||||||||| | || || ||||| Sbjct: 17503140 ggcaattatttgtggaaaagttggacaagtgccagtacagaaaatactaagaaacgggca 17503081 Query: 343 cacggtaactgtatttactgttgggacagggggcatgtttgaccagaggacagtagctgc 402 || |||||||| ||||||||||| ||||| ||||||||||||||||||||||||| ||| Sbjct: 17503080 tacagtaactgtctttactgttggaacaggtggcatgtttgaccagaggacagtaggtgc 17503021 Query: 403 tgagaacttgccaatgccagctcagtggcatcgaatagctattcataatgagcagcttgg 462 ||| ||||||||||||||||||||||||||||||||| || |||| |||||||||||||| Sbjct: 17503020 tgaaaacttgccaatgccagctcagtggcatcgaatatctgttcacaatgagcagcttgg 17502961 Query: 463 tgcatatgctgttcagaagttagtcaagaa 492 ||||| ||| |||||||||||||||||||| Sbjct: 17502960 tgcatttgccgttcagaagttagtcaagaa 17502931 Score = 151 bits (76), Expect = 6e-33 Identities = 94/100 (94%) Strand = Plus / Minus Query: 495 ctgcagtctatgttgagggtgatattgagactagagtctacaatgacagaatcaacgatc 554 |||||||||| |||||||||||||||||||| |||||||||||||||||||| || |||| Sbjct: 17502820 ctgcagtctacgttgagggtgatattgagaccagagtctacaatgacagaattaatgatc 17502761 Query: 555 aagtgaaaaatatacctgagatctgtgtgcgacgtgatgg 594 |||||||||||||||| |||||||||||||| |||||||| Sbjct: 17502760 aagtgaaaaatataccagagatctgtgtgcggcgtgatgg 17502721 Score = 97.6 bits (49), Expect = 8e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 163 tacagaaaatcacaagcatggagctctacagtttctttttctgatgttgatgagaagaat 222 ||||||||||| |||||||||| ||| || | |||||||||||||| |||||||||||| Sbjct: 17503364 tacagaaaatcgcaagcatggaactcgactgcgtctttttctgatgtcgatgagaagaat 17503305 Query: 223 ggcatgggtggtgatgccgatgatgattt 251 ||| ||||||||||||||| |||||||| Sbjct: 17503304 cgcaagggtggtgatgccgaagatgattt 17503276