BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst029i20
         (822 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...   157   9e-35
dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic D...   157   9e-35
dbj|AK241100.1| Oryza sativa (japonica cultivar-group) cDNA, clo...   101   4e-18
ref|NM_001050079.1| Oryza sativa (japonica cultivar-group) Os01g...   101   4e-18
gb|AY106032.1| Zea mays PCO117779 mRNA sequence                        80   2e-11

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  157 bits (79), Expect = 9e-35
 Identities = 150/173 (86%), Gaps = 3/173 (1%)
 Strand = Plus / Plus

                                                                            
Query: 537      gtctgtatatgtagcttactatagagatatatgtgttggggctattgcgtgtcgcctaga 596
                |||||||||||||||||| || || |||||||| || ||||| |||||||||||||| ||
Sbjct: 24142728 gtctgtatatgtagcttattacagcgatatatgcgtcggggcgattgcgtgtcgcctgga 24142787

                                                                            
Query: 597      gaa---ggaaggaggggcgatccgtgtttatatcatgactctgggtgtactggcaccgta 653
                |||   ||||||||| ||  || |||||||||||||||| ||||| ||||||||||||||
Sbjct: 24142788 gaagaaggaaggaggagcagtctgtgtttatatcatgacgctgggggtactggcaccgta 24142847

                                                                     
Query: 654      tcgtggtctcgggatcggtgagaatcccccctttctgattttattttcagtta 706
                |||| |||| |||||||||||||||  ||||||||||| ||| |||| |||||
Sbjct: 24142848 tcgtagtcttgggatcggtgagaatttcccctttctgactttgttttgagtta 24142900



 Score =  105 bits (53), Expect = 3e-19
 Identities = 62/65 (95%)
 Strand = Plus / Plus

                                                                            
Query: 1        ccgctacaacgacaagtactaccaggacaccatcgcctccaaggacttctccaagctcgg 60
                |||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 24142261 ccgctacaacgagaagtactaccacgacaccatcgcctccaaggagttctccaagctcgg 24142320

                     
Query: 61       tgcgc 65
                |||||
Sbjct: 24142321 tgcgc 24142325


>dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0410E03
          Length = 164839

 Score =  157 bits (79), Expect = 9e-35
 Identities = 150/173 (86%), Gaps = 3/173 (1%)
 Strand = Plus / Plus

                                                                          
Query: 537    gtctgtatatgtagcttactatagagatatatgtgttggggctattgcgtgtcgcctaga 596
              |||||||||||||||||| || || |||||||| || ||||| |||||||||||||| ||
Sbjct: 118550 gtctgtatatgtagcttattacagcgatatatgcgtcggggcgattgcgtgtcgcctgga 118609

                                                                          
Query: 597    gaa---ggaaggaggggcgatccgtgtttatatcatgactctgggtgtactggcaccgta 653
              |||   ||||||||| ||  || |||||||||||||||| ||||| ||||||||||||||
Sbjct: 118610 gaagaaggaaggaggagcagtctgtgtttatatcatgacgctgggggtactggcaccgta 118669

                                                                   
Query: 654    tcgtggtctcgggatcggtgagaatcccccctttctgattttattttcagtta 706
              |||| |||| |||||||||||||||  ||||||||||| ||| |||| |||||
Sbjct: 118670 tcgtagtcttgggatcggtgagaatttcccctttctgactttgttttgagtta 118722



 Score =  105 bits (53), Expect = 3e-19
 Identities = 62/65 (95%)
 Strand = Plus / Plus

                                                                          
Query: 1      ccgctacaacgacaagtactaccaggacaccatcgcctccaaggacttctccaagctcgg 60
              |||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 118083 ccgctacaacgagaagtactaccacgacaccatcgcctccaaggagttctccaagctcgg 118142

                   
Query: 61     tgcgc 65
              |||||
Sbjct: 118143 tgcgc 118147


>dbj|AK241100.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065077N17,
           full insert sequence
          Length = 880

 Score =  101 bits (51), Expect = 4e-18
 Identities = 98/113 (86%), Gaps = 3/113 (2%)
 Strand = Plus / Plus

                                                                       
Query: 562 gatatatgtgttggggctattgcgtgtcgcctagagaa---ggaaggaggggcgatccgt 618
           |||||||| || ||||| |||||||||||||| |||||   ||||||||| ||  || ||
Sbjct: 333 gatatatgcgtcggggcgattgcgtgtcgcctggagaagaaggaaggaggagcagtctgt 392

                                                                
Query: 619 gtttatatcatgactctgggtgtactggcaccgtatcgtggtctcgggatcgg 671
           |||||||||||||| ||||| |||||||||||||||||| |||| ||||||||
Sbjct: 393 gtttatatcatgacgctgggggtactggcaccgtatcgtagtcttgggatcgg 445



 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1   ccgctacaacgacaagtactaccaggacaccatcgcctccaaggacttctccaagctcg 59
           |||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 263 ccgctacaacgagaagtactaccacgacaccatcgcctccaaggagttctccaagctcg 321


>ref|NM_001050079.1| Oryza sativa (japonica cultivar-group) Os01g0610400 (Os01g0610400)
           mRNA, complete cds
          Length = 540

 Score =  101 bits (51), Expect = 4e-18
 Identities = 98/113 (86%), Gaps = 3/113 (2%)
 Strand = Plus / Plus

                                                                       
Query: 562 gatatatgtgttggggctattgcgtgtcgcctagagaa---ggaaggaggggcgatccgt 618
           |||||||| || ||||| |||||||||||||| |||||   ||||||||| ||  || ||
Sbjct: 211 gatatatgcgtcggggcgattgcgtgtcgcctggagaagaaggaaggaggagcagtctgt 270

                                                                
Query: 619 gtttatatcatgactctgggtgtactggcaccgtatcgtggtctcgggatcgg 671
           |||||||||||||| ||||| |||||||||||||||||| |||| ||||||||
Sbjct: 271 gtttatatcatgacgctgggggtactggcaccgtatcgtagtcttgggatcgg 323



 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1   ccgctacaacgacaagtactaccaggacaccatcgcctccaaggacttctccaagctcg 59
           |||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 141 ccgctacaacgagaagtactaccacgacaccatcgcctccaaggagttctccaagctcg 199


>gb|AY106032.1| Zea mays PCO117779 mRNA sequence
          Length = 1015

 Score = 79.8 bits (40), Expect = 2e-11
 Identities = 99/118 (83%), Gaps = 3/118 (2%)
 Strand = Plus / Plus

                                                                       
Query: 548 tagcttactatagagatatatgtgttggggctattgcgtgtcgcctagagaa---ggaag 604
           |||| |||| ||| ||||| |||||||| || || || |||||||| |||||   |||||
Sbjct: 334 tagcatactttagcgatatttgtgttggtgcgatagcttgtcgcctggagaagaaggaag 393

                                                                     
Query: 605 gaggggcgatccgtgtttatatcatgactctgggtgtactggcaccgtatcgtggtct 662
           |||| ||  |||| ||||||||||||||  |||||||||||||||||||||| |||||
Sbjct: 394 gaggagcagtccgagtttatatcatgaccttgggtgtactggcaccgtatcggggtct 451