BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst029g18
         (775 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AF545810.1| Oryza sativa (japonica cultivar-group) shoot prot...   315   1e-82
gb|AC118675.2| Genomic sequence for Oryza sativa, Nipponbare str...   315   1e-82
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...   315   1e-82
ref|NM_001056626.1| Oryza sativa (japonica cultivar-group) Os03g...   270   8e-69
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...   224   4e-55

>gb|AF545810.1| Oryza sativa (japonica cultivar-group) shoot protein RAA2 (RAA2)
           mRNA, complete cds
          Length = 514

 Score =  315 bits (159), Expect = 1e-82
 Identities = 207/223 (92%)
 Strand = Plus / Plus

                                                                       
Query: 207 gctggtgtacgtgccgacgaacgagacgatggcgtccctcgaggcgctggagcggcggct 266
           |||||||||||||||| ||||||||||||||| ||| ||  |||||||||||||| ||||
Sbjct: 103 gctggtgtacgtgccggcgaacgagacgatggggtcgctgcaggcgctggagcggaggct 162

                                                                       
Query: 267 ggcggggctcggctgggagcggtactacgagaaccgcgccatcgtgcagctccaccgccg 326
           |||||||||||| |||||||| ||||||||| |||||||| | |||||||||||||||||
Sbjct: 163 ggcggggctcgggtgggagcgctactacgaggaccgcgccgtggtgcagctccaccgccg 222

                                                                       
Query: 327 cgacggcggcgtcgacctcatctcgcttccccgcgacttcgccagcttccgctccaccca 386
           ||||||||||| |||||||||||| || ||||||||||||||| ||||||||||||||||
Sbjct: 223 cgacggcggcgccgacctcatctccctcccccgcgacttcgcccgcttccgctccaccca 282

                                                      
Query: 387 catgtacgacgtcgtactcaagaaccgcgaccacttcaaggtc 429
           ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 283 catgtacgacgtcgtcctcaagaaccgcgaccacttcaaggtc 325


>gb|AC118675.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0094H06, from chromosome 3, complete sequence
          Length = 118075

 Score =  315 bits (159), Expect = 1e-82
 Identities = 207/223 (92%)
 Strand = Plus / Plus

                                                                         
Query: 207   gctggtgtacgtgccgacgaacgagacgatggcgtccctcgaggcgctggagcggcggct 266
             |||||||||||||||| ||||||||||||||| ||| ||  |||||||||||||| ||||
Sbjct: 34353 gctggtgtacgtgccggcgaacgagacgatggggtcgctgcaggcgctggagcggaggct 34412

                                                                         
Query: 267   ggcggggctcggctgggagcggtactacgagaaccgcgccatcgtgcagctccaccgccg 326
             |||||||||||| |||||||| ||||||||| |||||||| | |||||||||||||||||
Sbjct: 34413 ggcggggctcgggtgggagcgctactacgaggaccgcgccgtggtgcagctccaccgccg 34472

                                                                         
Query: 327   cgacggcggcgtcgacctcatctcgcttccccgcgacttcgccagcttccgctccaccca 386
             ||||||||||| |||||||||||| || ||||||||||||||| ||||||||||||||||
Sbjct: 34473 cgacggcggcgccgacctcatctccctcccccgcgacttcgcccgcttccgctccaccca 34532

                                                        
Query: 387   catgtacgacgtcgtactcaagaaccgcgaccacttcaaggtc 429
             ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 34533 catgtacgacgtcgtcctcaagaaccgcgaccacttcaaggtc 34575


>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  315 bits (159), Expect = 1e-82
 Identities = 207/223 (92%)
 Strand = Plus / Minus

                                                                            
Query: 207      gctggtgtacgtgccgacgaacgagacgatggcgtccctcgaggcgctggagcggcggct 266
                |||||||||||||||| ||||||||||||||| ||| ||  |||||||||||||| ||||
Sbjct: 12901919 gctggtgtacgtgccggcgaacgagacgatggggtcgctgcaggcgctggagcggaggct 12901860

                                                                            
Query: 267      ggcggggctcggctgggagcggtactacgagaaccgcgccatcgtgcagctccaccgccg 326
                |||||||||||| |||||||| ||||||||| |||||||| | |||||||||||||||||
Sbjct: 12901859 ggcggggctcgggtgggagcgctactacgaggaccgcgccgtggtgcagctccaccgccg 12901800

                                                                            
Query: 327      cgacggcggcgtcgacctcatctcgcttccccgcgacttcgccagcttccgctccaccca 386
                ||||||||||| |||||||||||| || ||||||||||||||| ||||||||||||||||
Sbjct: 12901799 cgacggcggcgccgacctcatctccctcccccgcgacttcgcccgcttccgctccaccca 12901740

                                                           
Query: 387      catgtacgacgtcgtactcaagaaccgcgaccacttcaaggtc 429
                ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 12901739 catgtacgacgtcgtcctcaagaaccgcgaccacttcaaggtc 12901697


>ref|NM_001056626.1| Oryza sativa (japonica cultivar-group) Os03g0346200 (Os03g0346200)
           mRNA, complete cds
          Length = 306

 Score =  270 bits (136), Expect = 8e-69
 Identities = 169/180 (93%)
 Strand = Plus / Plus

                                                                       
Query: 248 aggcgctggagcggcggctggcggggctcggctgggagcggtactacgagaaccgcgcca 307
           |||||||||||||| |||||||||||||||| |||||||| ||||||||| |||||||| 
Sbjct: 14  aggcgctggagcggaggctggcggggctcgggtgggagcgctactacgaggaccgcgccg 73

                                                                       
Query: 308 tcgtgcagctccaccgccgcgacggcggcgtcgacctcatctcgcttccccgcgacttcg 367
           | |||||||||||||||||||||||||||| |||||||||||| || |||||||||||||
Sbjct: 74  tggtgcagctccaccgccgcgacggcggcgccgacctcatctccctcccccgcgacttcg 133

                                                                       
Query: 368 ccagcttccgctccacccacatgtacgacgtcgtactcaagaaccgcgaccacttcaagg 427
           || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 134 cccgcttccgctccacccacatgtacgacgtcgtcctcaagaaccgcgaccacttcaagg 193


>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score =  224 bits (113), Expect = 4e-55
 Identities = 173/193 (89%)
 Strand = Plus / Plus

                                                                            
Query: 247      gaggcgctggagcggcggctggcggggctcggctgggagcggtactacgagaaccgcgcc 306
                ||||||||||||||| |||||| || ||| || |||||||| ||||||||| ||||||||
Sbjct: 28314482 gaggcgctggagcggaggctgggggcgctggggtgggagcgctactacgaggaccgcgcc 28314541

                                                                            
Query: 307      atcgtgcagctccaccgccgcgacggcggcgtcgacctcatctcgcttccccgcgacttc 366
                | | ||||||||||| | ||||||||| ||| ||||||||||||  | ||||||||||||
Sbjct: 28314542 accctgcagctccacaggcgcgacggcagcgccgacctcatctccatcccccgcgacttc 28314601

                                                                            
Query: 367      gccagcttccgctccacccacatgtacgacgtcgtactcaagaaccgcgaccacttcaag 426
                 || |||||||||||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 28314602 tcccgcttccgctccacccacatgtacgacgtcgtcgtcaagaaccgcgaccacttcaag 28314661

                             
Query: 427      gtcgtcgacctcc 439
                |||||||||||||
Sbjct: 28314662 gtcgtcgacctcc 28314674