BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst029g15
         (600 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NM_001073703.1| Oryza sativa (japonica cultivar-group) Os12g...   170   4e-39
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...   157   6e-35
emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa...   157   6e-35
gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence      103   8e-19

>ref|NM_001073703.1| Oryza sativa (japonica cultivar-group) Os12g0592200 (Os12g0592200)
           mRNA, complete cds
          Length = 309

 Score =  170 bits (86), Expect = 4e-39
 Identities = 110/118 (93%)
 Strand = Plus / Plus

                                                                       
Query: 188 cggccgcacgaccgctggcggcgatgatggggtcgccggtgacggcggcggcggtactgg 247
           |||||||||| ||||||||||||||||||||||||||| ||||| |||||||| | ||||
Sbjct: 158 cggccgcacggccgctggcggcgatgatggggtcgccgctgacgacggcggcgttgctgg 217

                                                                     
Query: 248 cgcggctgacggcgcatccggcggcgagcgcgcgggcgtgctgcgagctctcccaggg 305
           |||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 218 cgcggctgacggcgcacccggcggccagcgcgcgggcctgctgcgagctctcccaggg 275



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                      
Query: 31 atggcgtggcgcggcgcggcctcacgcaccgtcctcgccgccgtccgacgcccggcgccc 90
          ||||||||||||||||| ||||| |||||||||||||| |||||||| ||||||| ||||
Sbjct: 1  atggcgtggcgcggcgccgcctcccgcaccgtcctcgcggccgtccgccgcccggggccc 60

            
Query: 91 tc 92
          ||
Sbjct: 61 tc 62


>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score =  157 bits (79), Expect = 6e-35
 Identities = 100/107 (93%)
 Strand = Plus / Plus

                                                                            
Query: 199      ccgctggcggcgatgatggggtcgccggtgacggcggcggcggtactggcgcggctgacg 258
                ||||||||||||||||||||||||||| ||||| |||||||| | |||||||||||||||
Sbjct: 24849215 ccgctggcggcgatgatggggtcgccgctgacgacggcggcgttgctggcgcggctgacg 24849274

                                                               
Query: 259      gcgcatccggcggcgagcgcgcgggcgtgctgcgagctctcccaggg 305
                ||||| |||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 24849275 gcgcacccggcggccagcgcgcgggcctgctgcgagctctcccaggg 24849321



 Score =  121 bits (61), Expect = 3e-24
 Identities = 124/142 (87%), Gaps = 6/142 (4%)
 Strand = Plus / Plus

                                                                            
Query: 375      gtacttgaagttaccatgtagattcatttgtcctttggaaaaggatacaactcttcttgg 434
                |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 24850711 gtacttgaagttaccatgtagattcact-gtcctttg-aaaaggatacaactcttcttgg 24850768

                                                                            
Query: 435      atgcgtcttttggaaagctattctggcgtttcatccttttaactgcaaagttagaagaat 494
                ||||||||||||||| ||| |||||| ||||    |  |||||| |||||||||||||| 
Sbjct: 24850769 atgcgtcttttggaaggctgttctggtgttt----cgattaacttcaaagttagaagaaa 24850824

                                      
Query: 495      atctccagcaatagctcctctc 516
                 |||||||  ||||||| ||||
Sbjct: 24850825 ctctccagtgatagctcgtctc 24850846



 Score =  105 bits (53), Expect = 2e-19
 Identities = 68/73 (93%)
 Strand = Plus / Plus

                                                                            
Query: 20       aaaccctagccatggcgtggcgcggcgcggcctcacgcaccgtcctcgccgccgtccgac 79
                |||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| |
Sbjct: 24848936 aaaccctagccatggcgtggcgcggcgccgcctcccgcaccgtcctcgcggccgtccgcc 24848995

                             
Query: 80       gcccggcgccctc 92
                |||||| ||||||
Sbjct: 24848996 gcccggggccctc 24849008


>emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa0010M16 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 132741

 Score =  157 bits (79), Expect = 6e-35
 Identities = 100/107 (93%)
 Strand = Plus / Minus

                                                                          
Query: 199    ccgctggcggcgatgatggggtcgccggtgacggcggcggcggtactggcgcggctgacg 258
              ||||||||||||||||||||||||||| ||||| |||||||| | |||||||||||||||
Sbjct: 115653 ccgctggcggcgatgatggggtcgccgctgacgacggcggcgttgctggcgcggctgacg 115594

                                                             
Query: 259    gcgcatccggcggcgagcgcgcgggcgtgctgcgagctctcccaggg 305
              ||||| |||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 115593 gcgcacccggcggccagcgcgcgggcctgctgcgagctctcccaggg 115547



 Score =  121 bits (61), Expect = 3e-24
 Identities = 124/142 (87%), Gaps = 6/142 (4%)
 Strand = Plus / Minus

                                                                          
Query: 375    gtacttgaagttaccatgtagattcatttgtcctttggaaaaggatacaactcttcttgg 434
              |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 114157 gtacttgaagttaccatgtagattcact-gtcctttg-aaaaggatacaactcttcttgg 114100

                                                                          
Query: 435    atgcgtcttttggaaagctattctggcgtttcatccttttaactgcaaagttagaagaat 494
              ||||||||||||||| ||| |||||| ||||    |  |||||| |||||||||||||| 
Sbjct: 114099 atgcgtcttttggaaggctgttctggtgttt----cgattaacttcaaagttagaagaaa 114044

                                    
Query: 495    atctccagcaatagctcctctc 516
               |||||||  ||||||| ||||
Sbjct: 114043 ctctccagtgatagctcgtctc 114022



 Score =  105 bits (53), Expect = 2e-19
 Identities = 68/73 (93%)
 Strand = Plus / Minus

                                                                          
Query: 20     aaaccctagccatggcgtggcgcggcgcggcctcacgcaccgtcctcgccgccgtccgac 79
              |||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| |
Sbjct: 115932 aaaccctagccatggcgtggcgcggcgccgcctcccgcaccgtcctcgcggccgtccgcc 115873

                           
Query: 80     gcccggcgccctc 92
              |||||| ||||||
Sbjct: 115872 gcccggggccctc 115860


>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence
          Length = 204120

 Score =  103 bits (52), Expect = 8e-19
 Identities = 91/104 (87%)
 Strand = Plus / Minus

                                                                          
Query: 202    ctggcggcgatgatggggtcgccggtgacggcggcggcggtactggcgcggctgacggcg 261
              ||||||||| |||||||||| |||||||||| ||| |||||  ||||||| || ||||||
Sbjct: 179603 ctggcggcgttgatggggtccccggtgacggtggccgcggtgatggcgcgtctcacggcg 179544

                                                          
Query: 262    catccggcggcgagcgcgcgggcgtgctgcgagctctcccaggg 305
              || || |  || ||||||||||||||||||||||||||||||||
Sbjct: 179543 caccccggtgccagcgcgcgggcgtgctgcgagctctcccaggg 179500