BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst029f09 (997 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001059061.1| Oryza sativa (japonica cultivar-group) Os04g... 870 0.0 dbj|AK068316.1| Oryza sativa (japonica cultivar-group) cDNA clon... 870 0.0 gb|BT016470.1| Zea mays clone Contig303 mRNA sequence 771 0.0 gb|AY103570.1| Zea mays PCO088401 mRNA sequence 771 0.0 gb|U64436.1|ZMU64436 Zea mays ribosomal protein S8 mRNA, complet... 771 0.0 >ref|NM_001059061.1| Oryza sativa (japonica cultivar-group) Os04g0349500 (Os04g0349500) mRNA, complete cds Length = 1021 Score = 870 bits (439), Expect = 0.0 Identities = 667/743 (89%) Strand = Plus / Plus Query: 67 ccgctgccaccatgggtatctcgcgtgactcgatgcacaagcgccgggcaaccggcggca 126 |||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| || | Sbjct: 87 ccgccgccaccatgggtatctcgcgtgactccatgcacaagcgccgggccaccggtggga 146 Query: 127 agcaaaagccgtggcgcaagaagagaaagtatgagcttggccgccagcctgccaacacca 186 |||| || ||||| | |||||| |||||||||||||||| |||||||| || ||||||| Sbjct: 147 agcagaaagcgtggaggaagaagcgaaagtatgagcttggtcgccagccggcaaacacca 206 Query: 187 aactgtcaagcaacaagacagtgaggagggtccgtgttcgcggaggtaatgtgaagtgga 246 | |||| |||||||||||||||||||||||||||||||| ||||| ||| ||||||||| Sbjct: 207 agttgtcgagcaacaagacagtgaggagggtccgtgttcgtggaggaaatctgaagtgga 266 Query: 247 gggcccttcggctggatactggtaactatgcatggggaagtgaggctgtaacccgcaaga 306 |||| ||||| |||||||||||||||||| | ||||||||||||||||| || ||||||| Sbjct: 267 gggctcttcgcctggatactggtaactattcttggggaagtgaggctgtcactcgcaaga 326 Query: 307 ctcgtatcctggatgtggtctacaatgcatcaaacaatgagcttgttagaactcagaccc 366 | |||||||| ||||||||||||||||| ||||||||||||||||| || || ||||||| Sbjct: 327 cccgtatccttgatgtggtctacaatgcgtcaaacaatgagcttgtgaggacccagaccc 386 Query: 367 ttgtgaagagtgccattgtgcaagttgatgctgccccgttcaagcagtggtacctcactc 426 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 387 ttgtgaagagtgccattgtgcaagttgatgctgccccattcaagcagtggtatctcactc 446 Query: 427 actatggagttgacatcggtaggaagaagaaggctcctgctgccaagaaggatgctgctg 486 ||||||| || || ||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 447 actatggtgtcgatatcggtaggaagaagaaagctcctgctgctaagaaggatgctgctg 506 Query: 487 agggacaagagggtgaggttgcagcagaggaaacgaagaagagcaaccatatcctgagaa 546 |||||||||||||||||| ||| | |||||| | || |||||||||||| | |||| | Sbjct: 507 agggacaagagggtgaggctgccacggaggaagcaaaaaagagcaaccatgttgtgagga 566 Query: 547 agcttgaaaagcgtcagcagggacgcacgcttgacccgcacattgaagagcaatttggca 606 ||||||||||||||||||| ||||| || ||| |||||||||||||||||||||||| Sbjct: 567 agcttgaaaagcgtcagcaaactcgcactctggactcgcacattgaagagcaatttggca 626 Query: 607 gtggaaggttattggcctgcatttcctcccgtcctgggcagtgtggccgggctgatgggt 666 | |||||| | ||||||||||| |||||||| |||||||| |||||| | |||||||||| Sbjct: 627 gcggaaggctcttggcctgcatctcctcccggcctgggcaatgtggcagagctgatgggt 686 Query: 667 atatcctggagggcaaggagcttgagttctacatgaagaagctccagaggaagaagggca 726 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 687 acatcctggagggcaaagagcttgagttctacatgaagaagctccagaggaagaagggca 746 Query: 727 agggtgctgcagcttagagcattctcctgagtgtgttttacgctggaaggaccgccctat 786 |||||||||||||||||||| ||||| |||||||||||||||||||||| ||||| | Sbjct: 747 agggtgctgcagcttagagcgttctctcgagtgtgttttacgctggaaggcccgcctatt 806 Query: 787 ttattcgctggattttgttagtc 809 |||||| ||||||||||||||| Sbjct: 807 ttattcagtggattttgttagtc 829 Score = 91.7 bits (46), Expect = 5e-15 Identities = 65/70 (92%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 894 gagaattttcacctgatatggttgtattctcgtgatatttaggttcaatgtgtactccag 953 |||||||||||| || |||||||||||||||||| ||||||||||| ||||||||| ||| Sbjct: 923 gagaattttcacatgctatggttgtattctcgtggtatttaggttccatgtgtact-cag 981 Query: 954 ctacagcatt 963 |||||||||| Sbjct: 982 ctacagcatt 991 >dbj|AK068316.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151C04, full insert sequence Length = 1022 Score = 870 bits (439), Expect = 0.0 Identities = 667/743 (89%) Strand = Plus / Plus Query: 67 ccgctgccaccatgggtatctcgcgtgactcgatgcacaagcgccgggcaaccggcggca 126 |||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| || | Sbjct: 88 ccgccgccaccatgggtatctcgcgtgactccatgcacaagcgccgggccaccggtggga 147 Query: 127 agcaaaagccgtggcgcaagaagagaaagtatgagcttggccgccagcctgccaacacca 186 |||| || ||||| | |||||| |||||||||||||||| |||||||| || ||||||| Sbjct: 148 agcagaaagcgtggaggaagaagcgaaagtatgagcttggtcgccagccggcaaacacca 207 Query: 187 aactgtcaagcaacaagacagtgaggagggtccgtgttcgcggaggtaatgtgaagtgga 246 | |||| |||||||||||||||||||||||||||||||| ||||| ||| ||||||||| Sbjct: 208 agttgtcgagcaacaagacagtgaggagggtccgtgttcgtggaggaaatctgaagtgga 267 Query: 247 gggcccttcggctggatactggtaactatgcatggggaagtgaggctgtaacccgcaaga 306 |||| ||||| |||||||||||||||||| | ||||||||||||||||| || ||||||| Sbjct: 268 gggctcttcgcctggatactggtaactattcttggggaagtgaggctgtcactcgcaaga 327 Query: 307 ctcgtatcctggatgtggtctacaatgcatcaaacaatgagcttgttagaactcagaccc 366 | |||||||| ||||||||||||||||| ||||||||||||||||| || || ||||||| Sbjct: 328 cccgtatccttgatgtggtctacaatgcgtcaaacaatgagcttgtgaggacccagaccc 387 Query: 367 ttgtgaagagtgccattgtgcaagttgatgctgccccgttcaagcagtggtacctcactc 426 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 388 ttgtgaagagtgccattgtgcaagttgatgctgccccattcaagcagtggtatctcactc 447 Query: 427 actatggagttgacatcggtaggaagaagaaggctcctgctgccaagaaggatgctgctg 486 ||||||| || || ||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 448 actatggtgtcgatatcggtaggaagaagaaagctcctgctgctaagaaggatgctgctg 507 Query: 487 agggacaagagggtgaggttgcagcagaggaaacgaagaagagcaaccatatcctgagaa 546 |||||||||||||||||| ||| | |||||| | || |||||||||||| | |||| | Sbjct: 508 agggacaagagggtgaggctgccacggaggaagcaaaaaagagcaaccatgttgtgagga 567 Query: 547 agcttgaaaagcgtcagcagggacgcacgcttgacccgcacattgaagagcaatttggca 606 ||||||||||||||||||| ||||| || ||| |||||||||||||||||||||||| Sbjct: 568 agcttgaaaagcgtcagcaaactcgcactctggactcgcacattgaagagcaatttggca 627 Query: 607 gtggaaggttattggcctgcatttcctcccgtcctgggcagtgtggccgggctgatgggt 666 | |||||| | ||||||||||| |||||||| |||||||| |||||| | |||||||||| Sbjct: 628 gcggaaggctcttggcctgcatctcctcccggcctgggcaatgtggcagagctgatgggt 687 Query: 667 atatcctggagggcaaggagcttgagttctacatgaagaagctccagaggaagaagggca 726 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 688 acatcctggagggcaaagagcttgagttctacatgaagaagctccagaggaagaagggca 747 Query: 727 agggtgctgcagcttagagcattctcctgagtgtgttttacgctggaaggaccgccctat 786 |||||||||||||||||||| ||||| |||||||||||||||||||||| ||||| | Sbjct: 748 agggtgctgcagcttagagcgttctctcgagtgtgttttacgctggaaggcccgcctatt 807 Query: 787 ttattcgctggattttgttagtc 809 |||||| ||||||||||||||| Sbjct: 808 ttattcagtggattttgttagtc 830 Score = 91.7 bits (46), Expect = 5e-15 Identities = 65/70 (92%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 894 gagaattttcacctgatatggttgtattctcgtgatatttaggttcaatgtgtactccag 953 |||||||||||| || |||||||||||||||||| ||||||||||| ||||||||| ||| Sbjct: 924 gagaattttcacatgctatggttgtattctcgtggtatttaggttccatgtgtact-cag 982 Query: 954 ctacagcatt 963 |||||||||| Sbjct: 983 ctacagcatt 992 >gb|BT016470.1| Zea mays clone Contig303 mRNA sequence Length = 936 Score = 771 bits (389), Expect = 0.0 Identities = 608/681 (89%) Strand = Plus / Plus Query: 72 gccaccatgggtatctcgcgtgactcgatgcacaagcgccgggcaaccggcggcaagcaa 131 ||||| ||||||||||||||||||||||||||||||||||| || ||||| || ||||| Sbjct: 54 gccacaatgggtatctcgcgtgactcgatgcacaagcgccgagccaccggtggaaagcag 113 Query: 132 aagccgtggcgcaagaagagaaagtatgagcttggccgccagcctgccaacaccaaactg 191 ||| | ||| | |||||| |||||||||||||||| |||||||| ||||||||||| || Sbjct: 114 aaggcctggaggaagaagcgaaagtatgagcttggtcgccagccagccaacaccaagttg 173 Query: 192 tcaagcaacaagacagtgaggagggtccgtgttcgcggaggtaatgtgaagtggagggcc 251 |||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 174 tcaagcaataagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggagggct 233 Query: 252 cttcggctggatactggtaactatgcatggggaagtgaggctgtaacccgcaagactcgt 311 ||||| || |||||||||||||| ||||||||||||| ||||| ||||||||||| ||| Sbjct: 234 cttcgccttgatactggtaactactcatggggaagtgaagctgttacccgcaagacccgt 293 Query: 312 atcctggatgtggtctacaatgcatcaaacaatgagcttgttagaactcagacccttgtg 371 ||||| || |||||||||||||||||||||||||||||||| || || || ||||||||| Sbjct: 294 atcctcgacgtggtctacaatgcatcaaacaatgagcttgtgaggacacaaacccttgtg 353 Query: 372 aagagtgccattgtgcaagttgatgctgccccgttcaagcagtggtacctcactcactat 431 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 354 aagagtgccattgtgcaagttgatgctgccccattcaagcagtggtacctcactcactat 413 Query: 432 ggagttgacatcggtaggaagaagaaggctcctgctgccaagaaggatgctgctgaggga 491 ||||||||||| |||||||||||||| | |||||||| ||||||||| |||||||||| Sbjct: 414 ggagttgacattggtaggaagaagaaaacccctgctgcaaagaaggataatgctgaggga 473 Query: 492 caagagggtgaggttgcagcagaggaaacgaagaagagcaaccatatcctgagaaagctt 551 ||||||| ||||| ||||| ||||||||||| |||||||||||| || ||| |||||| Sbjct: 474 caagaggttgaggcagcagctgaggaaacgaaaaagagcaaccatgtcacgaggaagctt 533 Query: 552 gaaaagcgtcagcagggacgcacgcttgacccgcacattgaagagcaatttggcagtgga 611 || ||||| || ||||||| || |||||||| |||||||| |||||||||||||||||| Sbjct: 534 gagaagcgcaaggagggacgtacccttgacccacacattgaggagcaatttggcagtgga 593 Query: 612 aggttattggcctgcatttcctcccgtcctgggcagtgtggccgggctgatgggtatatc 671 |||| |||| |||||||| ||||| ||||| ||||||||||| ||||||||||| ||| Sbjct: 594 cggttgctggcatgcatttcttcccgccctggacagtgtggccgagctgatgggtacatc 653 Query: 672 ctggagggcaaggagcttgagttctacatgaagaagctccagaggaagaagggcaagggt 731 || ||||| || |||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 654 cttgagggtaaagagcttgagttctacatgaagaagctacagaggaagaagggcaagagc 713 Query: 732 gctgcagcttagagcattctc 752 |||| |||||||||||||||| Sbjct: 714 gctgtagcttagagcattctc 734 >gb|AY103570.1| Zea mays PCO088401 mRNA sequence Length = 1107 Score = 771 bits (389), Expect = 0.0 Identities = 608/681 (89%) Strand = Plus / Plus Query: 72 gccaccatgggtatctcgcgtgactcgatgcacaagcgccgggcaaccggcggcaagcaa 131 ||||| ||||||||||||||||||||||||||||||||||| || ||||| || ||||| Sbjct: 85 gccacaatgggtatctcgcgtgactcgatgcacaagcgccgagccaccggtggaaagcag 144 Query: 132 aagccgtggcgcaagaagagaaagtatgagcttggccgccagcctgccaacaccaaactg 191 ||| | ||| | |||||| |||||||||||||||| |||||||| ||||||||||| || Sbjct: 145 aaggcctggaggaagaagcgaaagtatgagcttggtcgccagccagccaacaccaagttg 204 Query: 192 tcaagcaacaagacagtgaggagggtccgtgttcgcggaggtaatgtgaagtggagggcc 251 |||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 205 tcaagcaataagacagtgaggagggtccgtgttcggggaggtaatgtgaaatggagggct 264 Query: 252 cttcggctggatactggtaactatgcatggggaagtgaggctgtaacccgcaagactcgt 311 ||||| || |||||||||||||| ||||||||||||| ||||| ||||||||||| ||| Sbjct: 265 cttcgccttgatactggtaactactcatggggaagtgaagctgttacccgcaagacccgt 324 Query: 312 atcctggatgtggtctacaatgcatcaaacaatgagcttgttagaactcagacccttgtg 371 ||||| || |||||||||||||||||||||||||||||||| || || || ||||||||| Sbjct: 325 atcctcgacgtggtctacaatgcatcaaacaatgagcttgtgaggacacaaacccttgtg 384 Query: 372 aagagtgccattgtgcaagttgatgctgccccgttcaagcagtggtacctcactcactat 431 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 385 aagagtgccattgtgcaagttgatgctgccccattcaagcagtggtacctcactcactat 444 Query: 432 ggagttgacatcggtaggaagaagaaggctcctgctgccaagaaggatgctgctgaggga 491 ||||||||||| |||||||||||||| | |||||||| ||||||||| |||||||||| Sbjct: 445 ggagttgacattggtaggaagaagaaaacccctgctgcaaagaaggataatgctgaggga 504 Query: 492 caagagggtgaggttgcagcagaggaaacgaagaagagcaaccatatcctgagaaagctt 551 ||||||| ||||| ||||| ||||||||||| |||||||||||| || ||| |||||| Sbjct: 505 caagaggttgaggcagcagctgaggaaacgaaaaagagcaaccatgtcacgaggaagctt 564 Query: 552 gaaaagcgtcagcagggacgcacgcttgacccgcacattgaagagcaatttggcagtgga 611 || ||||| || ||||||| || |||||||| |||||||| |||||||||||||||||| Sbjct: 565 gagaagcgcaaggagggacgtacccttgacccacacattgaggagcaatttggcagtgga 624 Query: 612 aggttattggcctgcatttcctcccgtcctgggcagtgtggccgggctgatgggtatatc 671 |||| |||| |||||||| ||||| ||||| ||||||||||| ||||||||||| ||| Sbjct: 625 cggttgctggcatgcatttcttcccgccctggacagtgtggccgagctgatgggtacatc 684 Query: 672 ctggagggcaaggagcttgagttctacatgaagaagctccagaggaagaagggcaagggt 731 || ||||| || |||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 685 cttgagggtaaagagcttgagttctacatgaagaagctacagaggaagaagggcaagagc 744 Query: 732 gctgcagcttagagcattctc 752 |||| |||||||||||||||| Sbjct: 745 gctgtagcttagagcattctc 765 >gb|U64436.1|ZMU64436 Zea mays ribosomal protein S8 mRNA, complete cds Length = 843 Score = 771 bits (389), Expect = 0.0 Identities = 608/681 (89%) Strand = Plus / Plus Query: 72 gccaccatgggtatctcgcgtgactcgatgcacaagcgccgggcaaccggcggcaagcaa 131 ||||| ||||||||||||||||||||||||||||||||||| || ||||| || ||||| Sbjct: 32 gccacaatgggtatctcgcgtgactcgatgcacaagcgccgagccaccggtggaaagcag 91 Query: 132 aagccgtggcgcaagaagagaaagtatgagcttggccgccagcctgccaacaccaaactg 191 ||| | ||| | |||||| |||||||||||||||| |||||||| ||||||||||| || Sbjct: 92 aaggcctggaggaagaagcgaaagtatgagcttggtcgccagccagccaacaccaagttg 151 Query: 192 tcaagcaacaagacagtgaggagggtccgtgttcgcggaggtaatgtgaagtggagggcc 251 |||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 152 tcaagcaataagacagtgaggagggtccgtgttcgtggaggtaatgtgaaatggagggct 211 Query: 252 cttcggctggatactggtaactatgcatggggaagtgaggctgtaacccgcaagactcgt 311 ||||| || |||||||||||||| ||||||||||||| ||||| ||||||||||| ||| Sbjct: 212 cttcgccttgatactggtaactactcatggggaagtgaagctgttacccgcaagacccgt 271 Query: 312 atcctggatgtggtctacaatgcatcaaacaatgagcttgttagaactcagacccttgtg 371 ||||| || |||||||||||||||||||||||||||||||| || || || ||||||||| Sbjct: 272 atcctcgacgtggtctacaatgcatcaaacaatgagcttgtgaggacacaaacccttgtg 331 Query: 372 aagagtgccattgtgcaagttgatgctgccccgttcaagcagtggtacctcactcactat 431 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 332 aagagtgccattgtgcaagttgatgctgccccattcaagcagtggtacctcactcactat 391 Query: 432 ggagttgacatcggtaggaagaagaaggctcctgctgccaagaaggatgctgctgaggga 491 ||||||||||| |||||||||||||| | |||||||| ||||||||| |||||||||| Sbjct: 392 ggagttgacattggtaggaagaagaaaacccctgctgcaaagaaggataatgctgaggga 451 Query: 492 caagagggtgaggttgcagcagaggaaacgaagaagagcaaccatatcctgagaaagctt 551 ||||||| ||||| ||||| ||||||||||| |||||||||||| || ||| |||||| Sbjct: 452 caagaggttgaggcagcagctgaggaaacgaaaaagagcaaccatgtcacgaggaagctt 511 Query: 552 gaaaagcgtcagcagggacgcacgcttgacccgcacattgaagagcaatttggcagtgga 611 || ||||| || ||||||| || |||||||| |||||||| |||||||||||||||||| Sbjct: 512 gagaagcgcaaggagggacgtacccttgacccacacattgaggagcaatttggcagtgga 571 Query: 612 aggttattggcctgcatttcctcccgtcctgggcagtgtggccgggctgatgggtatatc 671 |||| |||| |||||||| ||||| ||||| ||||||||||| ||||||||||| ||| Sbjct: 572 cggttgctggcatgcatttcttcccgccctggacagtgtggccgagctgatgggtacatc 631 Query: 672 ctggagggcaaggagcttgagttctacatgaagaagctccagaggaagaagggcaagggt 731 || ||||| || |||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 632 cttgagggtaaagagcttgagttctacatgaagaagctacagaggaagaagggcaagagc 691 Query: 732 gctgcagcttagagcattctc 752 |||| |||||||||||||||| Sbjct: 692 gctgtagcttagagcattctc 712