BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst028n08
         (582 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...   107   5e-20
dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic D...   107   5e-20
emb|CT834779.1| Oryza sativa (indica cultivar-group) cDNA clone:...   101   3e-18
dbj|AK241684.1| Oryza sativa (japonica cultivar-group) cDNA, clo...   101   3e-18
ref|NM_001052093.1| Oryza sativa (japonica cultivar-group) Os01g...   101   3e-18

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  107 bits (54), Expect = 5e-20
 Identities = 63/66 (95%)
 Strand = Plus / Minus

                                                                            
Query: 95       tggtgaaggagaagaggttctgggtcgcctccttcctcgtcgcctgggcagccgcgctcc 154
                |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||
Sbjct: 43068737 tggtgaaggagaagaggttctgggtcgcctccttcctcctcgtctgggctgccgcgctcc 43068678

                      
Query: 155      aggtat 160
                ||||||
Sbjct: 43068677 aggtat 43068672



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 53/55 (96%)
 Strand = Plus / Minus

                                                                       
Query: 241      atggcaggggcacatgatgtggttgcagcgccaggacgccttcaagcacaagttc 295
                |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 43068568 atggcaggggcacatgatgtggatgcagcgccaggacgccttcaagcaaaagttc 43068514


>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0459B04
          Length = 142475

 Score =  107 bits (54), Expect = 5e-20
 Identities = 63/66 (95%)
 Strand = Plus / Minus

                                                                         
Query: 95    tggtgaaggagaagaggttctgggtcgcctccttcctcgtcgcctgggcagccgcgctcc 154
             |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||
Sbjct: 65766 tggtgaaggagaagaggttctgggtcgcctccttcctcctcgtctgggctgccgcgctcc 65707

                   
Query: 155   aggtat 160
             ||||||
Sbjct: 65706 aggtat 65701



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 53/55 (96%)
 Strand = Plus / Minus

                                                                    
Query: 241   atggcaggggcacatgatgtggttgcagcgccaggacgccttcaagcacaagttc 295
             |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 65597 atggcaggggcacatgatgtggatgcagcgccaggacgccttcaagcaaaagttc 65543


>emb|CT834779.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA039J12, full
           insert sequence
          Length = 563

 Score =  101 bits (51), Expect = 3e-18
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                       
Query: 95  tggtgaaggagaagaggttctgggtcgcctccttcctcgtcgcctgggcagccgcgctcc 154
           |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||
Sbjct: 75  tggtgaaggagaagaggttctgggtcgcctccttcctcctcgtctgggctgccgcgctcc 134

              
Query: 155 agg 157
           |||
Sbjct: 135 agg 137



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 49/51 (96%)
 Strand = Plus / Plus

                                                              
Query: 245 caggggcacatgatgtggttgcagcgccaggacgccttcaagcacaagttc 295
           |||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 134 caggggcacatgatgtggatgcagcgccaggacgccttcaagcaaaagttc 184


>dbj|AK241684.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065194D01,
           full insert sequence
          Length = 2215

 Score =  101 bits (51), Expect = 3e-18
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                       
Query: 95  tggtgaaggagaagaggttctgggtcgcctccttcctcgtcgcctgggcagccgcgctcc 154
           |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||
Sbjct: 91  tggtgaaggagaagaggttctgggtcgcctccttcctcctcgtctgggctgccgcgctcc 150

              
Query: 155 agg 157
           |||
Sbjct: 151 agg 153



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 49/51 (96%)
 Strand = Plus / Plus

                                                              
Query: 245 caggggcacatgatgtggttgcagcgccaggacgccttcaagcacaagttc 295
           |||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 150 caggggcacatgatgtggatgcagcgccaggacgccttcaagcaaaagttc 200


>ref|NM_001052093.1| Oryza sativa (japonica cultivar-group) Os01g0974800 (Os01g0974800)
           mRNA, complete cds
          Length = 168

 Score =  101 bits (51), Expect = 3e-18
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                       
Query: 95  tggtgaaggagaagaggttctgggtcgcctccttcctcgtcgcctgggcagccgcgctcc 154
           |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||
Sbjct: 11  tggtgaaggagaagaggttctgggtcgcctccttcctcctcgtctgggctgccgcgctcc 70

              
Query: 155 agg 157
           |||
Sbjct: 71  agg 73



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 49/51 (96%)
 Strand = Plus / Plus

                                                              
Query: 245 caggggcacatgatgtggttgcagcgccaggacgccttcaagcacaagttc 295
           |||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 70  caggggcacatgatgtggatgcagcgccaggacgccttcaagcaaaagttc 120